RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 MDFICQ9P1T7 246 aa14.38□□□□□ -0.11
TSPAN3-207ENST00000559494 CRIP1P50238 77 aa14.37□□□□□ -0.11
TSPAN3-207ENST00000559494 MEF2BQ02080 365 aaPredicted RBP14.37□□□□□ -0.11
TSPAN3-207ENST00000559494 ZC2HC1AQ96GY0 325 aa14.37□□□□□ -0.11
TSPAN3-207ENST00000559494 VAX2Q9UIW0 290 aa14.37□□□□□ -0.11
TSPAN3-207ENST00000559494 IFITM2Q01629 132 aa14.36□□□□□ -0.11
TSPAN3-207ENST00000559494 Q6ZTI0 123 aa14.36□□□□□ -0.11
TSPAN3-207ENST00000559494 TRGV11A0A075B6L2 103 aa14.35□□□□□ -0.11
TSPAN3-207ENST00000559494 GAGE12BA1L429 117 aa14.35□□□□□ -0.11
TSPAN3-207ENST00000559494 FABP5P3A8MUU1 101 aa14.35□□□□□ -0.11
TSPAN3-207ENST00000559494 IGLL5B9A064 214 aa14.35□□□□□ -0.11
TSPAN3-207ENST00000559494 GAGE7O76087 117 aa14.35□□□□□ -0.11
TSPAN3-207ENST00000559494 TYMSP04818 313 aa14.35□□□□□ -0.11
TSPAN3-207ENST00000559494 GAGE12FP0CL80 117 aa14.35□□□□□ -0.11
TSPAN3-207ENST00000559494 GAGE12GP0CL81 117 aa14.35□□□□□ -0.11
TSPAN3-207ENST00000559494 GAGE12IP0CL82 117 aa14.35□□□□□ -0.11
TSPAN3-207ENST00000559494 HTN3P15516 51 aa14.35□□□□□ -0.11
TSPAN3-207ENST00000559494 ZNF415Q09FC8 603 aa14.35□□□□□ -0.11
TSPAN3-207ENST00000559494 KCNS1Q96KK3 526 aa14.35□□□□□ -0.11
TSPAN3-207ENST00000559494 DERL1Q9BUN8 251 aa14.35□□□□□ -0.11
TSPAN3-207ENST00000559494 IGHV3-16A0A0C4DH30 117 aa14.34□□□□□ -0.11
TSPAN3-207ENST00000559494 SPINK4O60575 86 aa14.34□□□□□ -0.11
TSPAN3-207ENST00000559494 TAGLN2P37802 199 aaKnown RBP14.34□□□□□ -0.11
TSPAN3-207ENST00000559494 RPL35P42766 123 aaKnown RBP14.34□□□□□ -0.11
TSPAN3-207ENST00000559494 BAGE2Q86Y30 109 aa14.34□□□□□ -0.11
TSPAN3-207ENST00000559494 PDE6DO43924 150 aa14.33□□□□□ -0.12
TSPAN3-207ENST00000559494 NHLRC2Q8NBF2 726 aa14.33□□□□□ -0.12
TSPAN3-207ENST00000559494 MLST8Q9BVC4 326 aa14.33□□□□□ -0.12
TSPAN3-207ENST00000559494 SDF2L1Q9HCN8 221 aa14.33□□□□□ -0.12
TSPAN3-207ENST00000559494 ALMS1Q8TCU4 4167 aa14.32□□□□□ -0.12
TSPAN3-207ENST00000559494 TRGV1A0A0A0MS02 117 aa14.32□□□□□ -0.12
TSPAN3-207ENST00000559494 IGKV3D-20A0A0C4DH25 116 aa14.32□□□□□ -0.12
TSPAN3-207ENST00000559494 RBFOX3A6NFN3 312 aa14.32□□□□□ -0.12
TSPAN3-207ENST00000559494 ZNF674Q2M3X9 581 aa14.32□□□□□ -0.12
TSPAN3-207ENST00000559494 LYSTQ99698 3801 aa14.32□□□□□ -0.12
TSPAN3-207ENST00000559494 MED9Q9NWA0 146 aa14.32□□□□□ -0.12
TSPAN3-207ENST00000559494 APLNQ9ULZ1 77 aa14.32□□□□□ -0.12
TSPAN3-207ENST00000559494 MUC4Q99102 2169 aa14.32□□□□□ -0.12
TSPAN3-207ENST00000559494 IGHV4-4A0A075B6R2 117 aa14.31□□□□□ -0.12
TSPAN3-207ENST00000559494 RAB19A4D1S5 217 aa14.31□□□□□ -0.12
TSPAN3-207ENST00000559494 SH2D1AO60880 128 aa14.31□□□□□ -0.12
TSPAN3-207ENST00000559494 ATP5G1P05496 136 aa14.31□□□□□ -0.12
TSPAN3-207ENST00000559494 SPXQ9BT56 116 aa14.31□□□□□ -0.12
TSPAN3-207ENST00000559494 LGALS9BQ3B8N2 356 aa14.3□□□□□ -0.12
TSPAN3-207ENST00000559494 ZNF506Q5JVG8 444 aa14.3□□□□□ -0.12
TSPAN3-207ENST00000559494 FAM162BQ5T6X4 162 aa14.3□□□□□ -0.12
TSPAN3-207ENST00000559494 MRPL16Q9NX20 251 aaKnown RBP14.3□□□□□ -0.12
TSPAN3-207ENST00000559494 VPS13DQ5THJ4 4388 aa14.29□□□□□ -0.12
TSPAN3-207ENST00000559494 TOR2AQ5JU69 321 aa14.29□□□□□ -0.12
TSPAN3-207ENST00000559494 ZNF575Q86XF7 245 aa14.29□□□□□ -0.12
TSPAN3-207ENST00000559494 F5H768 121 aa14.28□□□□□ -0.12
TSPAN3-207ENST00000559494 IGLV2-8P01709 118 aa14.28□□□□□ -0.12
TSPAN3-207ENST00000559494 ORM1P02763 201 aa14.28□□□□□ -0.12
TSPAN3-207ENST00000559494 TCTAP57738 103 aa14.28□□□□□ -0.12
TSPAN3-207ENST00000559494 C18orf15Q96N68 181 aa14.28□□□□□ -0.12
TSPAN3-207ENST00000559494 FAM210AQ96ND0 272 aa14.28□□□□□ -0.12
TSPAN3-207ENST00000559494 TRGV2A0A075B6R0 118 aa14.27□□□□□ -0.12
TSPAN3-207ENST00000559494 LCE6AA0A183 80 aa14.27□□□□□ -0.12
TSPAN3-207ENST00000559494 KRBOX1C9JBD0 128 aa14.27□□□□□ -0.12
TSPAN3-207ENST00000559494 CENPWQ5EE01 88 aa14.27□□□□□ -0.12
TSPAN3-207ENST00000559494 RASL10AQ92737 203 aa14.27□□□□□ -0.12
TSPAN3-207ENST00000559494 FAM210BQ96KR6 192 aa14.27□□□□□ -0.12
TSPAN3-207ENST00000559494 B4DEV8 164 aa14.26□□□□□ -0.13
TSPAN3-207ENST00000559494 M0R036 132 aa14.26□□□□□ -0.13
TSPAN3-207ENST00000559494 RNASE3P12724 160 aaKnown RBP14.26□□□□□ -0.13
TSPAN3-207ENST00000559494 TMEM88Q6PEY1 159 aa14.26□□□□□ -0.13
TSPAN3-207ENST00000559494 C9orf85Q96MD7 179 aa14.26□□□□□ -0.13
TSPAN3-207ENST00000559494 TRBV20OR9-2A0A075B6H5 130 aa14.25□□□□□ -0.13
TSPAN3-207ENST00000559494 M0R2P5 195 aa14.25□□□□□ -0.13
TSPAN3-207ENST00000559494 HOXA5P20719 270 aa14.25□□□□□ -0.13
TSPAN3-207ENST00000559494 NDUFAF3Q9BU61 184 aa14.25□□□□□ -0.13
TSPAN3-207ENST00000559494 EIF5A2Q9GZV4 153 aaKnown RBP14.25□□□□□ -0.13
TSPAN3-207ENST00000559494 NACAE9PAV3 2078 aa14.24□□□□□ -0.13
TSPAN3-207ENST00000559494 TMEM250H0YL14 139 aa14.24□□□□□ -0.13
TSPAN3-207ENST00000559494 GNG4P50150 75 aa14.24□□□□□ -0.13
TSPAN3-207ENST00000559494 RAB14P61106 215 aa14.24□□□□□ -0.13
TSPAN3-207ENST00000559494 LINC01559Q495D7 138 aa14.24□□□□□ -0.13
TSPAN3-207ENST00000559494 RYR2Q92736 4967 aa14.23□□□□□ -0.13
TSPAN3-207ENST00000559494 GRIFINA4D1Z8 144 aa14.23□□□□□ -0.13
TSPAN3-207ENST00000559494 PGPEP1LA6NFU8 196 aa14.23□□□□□ -0.13
TSPAN3-207ENST00000559494 SRSF3P84103 164 aaKnown RBP14.23□□□□□ -0.13
TSPAN3-207ENST00000559494 OR5I1Q13606 314 aa14.23□□□□□ -0.13
TSPAN3-207ENST00000559494 DNLZQ5SXM8 178 aa14.23□□□□□ -0.13
TSPAN3-207ENST00000559494 PRR27Q6MZM9 219 aa14.23□□□□□ -0.13
TSPAN3-207ENST00000559494 POM121L12Q8N7R1 296 aa14.23□□□□□ -0.13
TSPAN3-207ENST00000559494 TMSB15BA0A087X1C1 80 aa14.22□□□□□ -0.13
TSPAN3-207ENST00000559494 IGHV3-53P01767 116 aa14.22□□□□□ -0.13
TSPAN3-207ENST00000559494 ASIPP42127 132 aa14.22□□□□□ -0.13
TSPAN3-207ENST00000559494 CLLU1Q5K131 121 aa14.22□□□□□ -0.13
TSPAN3-207ENST00000559494 LINC00476Q8WZB0 136 aa14.22□□□□□ -0.13
TSPAN3-207ENST00000559494 RYR3Q15413 4870 aa14.22□□□□□ -0.13
TSPAN3-207ENST00000559494 NDUFS6O75380 124 aaKnown RBP14.21□□□□□ -0.13
TSPAN3-207ENST00000559494 SRP19P09132 144 aaKnown RBP14.21□□□□□ -0.13
TSPAN3-207ENST00000559494 MGST1P10620 155 aaKnown RBP14.21□□□□□ -0.13
TSPAN3-207ENST00000559494 S100A4P26447 101 aaKnown RBP14.21□□□□□ -0.13
TSPAN3-207ENST00000559494 RPL19P84098 196 aaKnown RBP14.21□□□□□ -0.13
TSPAN3-207ENST00000559494 SMIM12Q96EX1 92 aa14.21□□□□□ -0.13
TSPAN3-207ENST00000559494 PARLQ9H300 379 aa14.21□□□□□ -0.13
TSPAN3-207ENST00000559494 C9JCJ5 164 aa14.2□□□□□ -0.14
TSPAN3-207ENST00000559494 C9JQL5 133 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms