RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 RBAKDNA6NC62 111 aa11.5□□□□□ -0.57
CDC42BPB-203ENST00000558867 KNCNA6PVL3 124 aa11.5□□□□□ -0.57
CDC42BPB-203ENST00000558867 PSG3Q16557 428 aa11.5□□□□□ -0.57
CDC42BPB-203ENST00000558867 SAMD13Q5VXD3 122 aa11.5□□□□□ -0.57
CDC42BPB-203ENST00000558867 GOLT1AQ6ZVE7 132 aa11.5□□□□□ -0.57
CDC42BPB-203ENST00000558867 TMEM183AQ8IXX5 376 aa11.5□□□□□ -0.57
CDC42BPB-203ENST00000558867 TMA7Q9Y2S6 64 aaKnown RBP11.5□□□□□ -0.57
CDC42BPB-203ENST00000558867 V9GYV3 84 aa11.5□□□□□ -0.57
CDC42BPB-203ENST00000558867 PKD1P98161 4303 aa11.5□□□□□ -0.57
CDC42BPB-203ENST00000558867 ABCA13Q86UQ4 5058 aa11.49□□□□□ -0.57
CDC42BPB-203ENST00000558867 DYNC1H1Q14204 4646 aaKnown RBP11.49□□□□□ -0.57
CDC42BPB-203ENST00000558867 TRAV34A0A0B4J273 112 aa11.49□□□□□ -0.57
CDC42BPB-203ENST00000558867 TMEM189A5PLL7 270 aa11.49□□□□□ -0.57
CDC42BPB-203ENST00000558867 TYMSP04818 313 aa11.49□□□□□ -0.57
CDC42BPB-203ENST00000558867 SPART-AS1P0CW21 52 aa11.49□□□□□ -0.57
CDC42BPB-203ENST00000558867 FLI1Q01543 452 aaPredicted RBP11.49□□□□□ -0.57
CDC42BPB-203ENST00000558867 IL36BQ9NZH7 164 aa11.49□□□□□ -0.57
CDC42BPB-203ENST00000558867 TEX48A0A1B0GUV7 120 aa11.48□□□□□ -0.57
CDC42BPB-203ENST00000558867 M0R3E3 92 aa11.48□□□□□ -0.57
CDC42BPB-203ENST00000558867 CXCL1P09341 107 aa11.48□□□□□ -0.57
CDC42BPB-203ENST00000558867 ERVFC1-1P60608 527 aa11.48□□□□□ -0.57
CDC42BPB-203ENST00000558867 SNRPD3P62318 126 aaKnown RBP11.48□□□□□ -0.57
CDC42BPB-203ENST00000558867 CT83Q5H943 113 aa11.48□□□□□ -0.57
CDC42BPB-203ENST00000558867 IBA57Q5T440 356 aaKnown RBP11.48□□□□□ -0.57
CDC42BPB-203ENST00000558867 CSNK1G2-AS1Q8NCQ2 148 aa11.48□□□□□ -0.57
CDC42BPB-203ENST00000558867 PPP1R14DQ9NXH3 145 aa11.48□□□□□ -0.57
CDC42BPB-203ENST00000558867 CELA1Q9UNI1 258 aa11.48□□□□□ -0.57
CDC42BPB-203ENST00000558867 URGCP-MRPS24S4R325 110 aa11.48□□□□□ -0.57
CDC42BPB-203ENST00000558867 AGRNO00468 2067 aa11.47□□□□□ -0.57
CDC42BPB-203ENST00000558867 C19orf71A6NCJ1 209 aa11.47□□□□□ -0.57
CDC42BPB-203ENST00000558867 OR5I1Q13606 314 aa11.47□□□□□ -0.57
CDC42BPB-203ENST00000558867 DCANP1Q8TF63 244 aa11.47□□□□□ -0.57
CDC42BPB-203ENST00000558867 RPH3ALQ9UNE2 315 aa11.47□□□□□ -0.57
CDC42BPB-203ENST00000558867 PSG8Q9UQ74 426 aa11.47□□□□□ -0.57
CDC42BPB-203ENST00000558867 IGLV2-18A0A075B6J9 118 aa11.46□□□□□ -0.57
CDC42BPB-203ENST00000558867 TGIF2-C20orf24A0A0A6YYL0 155 aa11.46□□□□□ -0.57
CDC42BPB-203ENST00000558867 TRAV8-2A0A0B4J237 113 aa11.46□□□□□ -0.57
CDC42BPB-203ENST00000558867 C1orf196B1AJZ1 125 aa11.46□□□□□ -0.57
CDC42BPB-203ENST00000558867 SOCS3O14543 225 aa11.46□□□□□ -0.57
CDC42BPB-203ENST00000558867 MGST1P10620 155 aaKnown RBP11.46□□□□□ -0.57
CDC42BPB-203ENST00000558867 PSMG4Q5JS54 123 aa11.46□□□□□ -0.57
CDC42BPB-203ENST00000558867 C1orf134Q5TEV5 83 aa11.46□□□□□ -0.57
CDC42BPB-203ENST00000558867 SMIM9A6NGZ8 99 aa11.45□□□□□ -0.58
CDC42BPB-203ENST00000558867 NPIPB6E9PJ23 425 aa11.45□□□□□ -0.58
CDC42BPB-203ENST00000558867 RAB5BP61020 215 aa11.45□□□□□ -0.58
CDC42BPB-203ENST00000558867 SAPCD1Q5SSQ6 148 aa11.45□□□□□ -0.58
CDC42BPB-203ENST00000558867 OR4B1Q8NGF8 309 aa11.45□□□□□ -0.58
CDC42BPB-203ENST00000558867 NEU1Q99519 415 aa11.45□□□□□ -0.58
CDC42BPB-203ENST00000558867 NRN1Q9NPD7 142 aa11.45□□□□□ -0.58
CDC42BPB-203ENST00000558867 XCL2Q9UBD3 114 aa11.45□□□□□ -0.58
CDC42BPB-203ENST00000558867 TRAV8-1A0A0A6YYK1 113 aa11.44□□□□□ -0.58
CDC42BPB-203ENST00000558867 SMIM27A0A1W2PRY6 76 aa11.44□□□□□ -0.58
CDC42BPB-203ENST00000558867 FAM231BA6NCW3 169 aa11.44□□□□□ -0.58
CDC42BPB-203ENST00000558867 GATCO43716 136 aaKnown RBP11.44□□□□□ -0.58
CDC42BPB-203ENST00000558867 FAM3BP58499 235 aaPredicted RBP11.44□□□□□ -0.58
CDC42BPB-203ENST00000558867 RPL19P84098 196 aaKnown RBP11.44□□□□□ -0.58
CDC42BPB-203ENST00000558867 Q6ZR54 194 aa11.44□□□□□ -0.58
CDC42BPB-203ENST00000558867 ZNF575Q86XF7 245 aa11.44□□□□□ -0.58
CDC42BPB-203ENST00000558867 NUDT10Q8NFP7 164 aa11.44□□□□□ -0.58
CDC42BPB-203ENST00000558867 NUDT11Q96G61 164 aa11.44□□□□□ -0.58
CDC42BPB-203ENST00000558867 RNASE7Q9H1E1 156 aaKnown RBP11.44□□□□□ -0.58
CDC42BPB-203ENST00000558867 A0A1W2PPQ1 181 aa11.43□□□□□ -0.58
CDC42BPB-203ENST00000558867 RPS10P46783 165 aaKnown RBP11.43□□□□□ -0.58
CDC42BPB-203ENST00000558867 COX19Q49B96 90 aa11.43□□□□□ -0.58
CDC42BPB-203ENST00000558867 PRNTQ86SH4 94 aa11.43□□□□□ -0.58
CDC42BPB-203ENST00000558867 NHLRC2Q8NBF2 726 aa11.43□□□□□ -0.58
CDC42BPB-203ENST00000558867 LENEPQ9Y5L5 61 aa11.43□□□□□ -0.58
CDC42BPB-203ENST00000558867 ZNF705GA8MUZ8 300 aaPredicted RBP11.42□□□□□ -0.58
CDC42BPB-203ENST00000558867 EMP1P54849 157 aa11.42□□□□□ -0.58
CDC42BPB-203ENST00000558867 C9orf47Q6ZRZ4 202 aa11.42□□□□□ -0.58
CDC42BPB-203ENST00000558867 C16orf92Q96LL3 132 aa11.42□□□□□ -0.58
CDC42BPB-203ENST00000558867 GFRA4Q9GZZ7 299 aa11.42□□□□□ -0.58
CDC42BPB-203ENST00000558867 C16orf90A8MZG2 172 aa11.41□□□□□ -0.58
CDC42BPB-203ENST00000558867 H3BMM0 161 aa11.41□□□□□ -0.58
CDC42BPB-203ENST00000558867 CDK2AP2O75956 126 aa11.41□□□□□ -0.58
CDC42BPB-203ENST00000558867 TSKUQ8WUA8 353 aa11.41□□□□□ -0.58
CDC42BPB-203ENST00000558867 ZC2HC1AQ96GY0 325 aa11.41□□□□□ -0.58
CDC42BPB-203ENST00000558867 SGK494Q96LW2 274 aa11.41□□□□□ -0.58
CDC42BPB-203ENST00000558867 RPP21Q9H633 154 aaKnown RBP11.41□□□□□ -0.58
CDC42BPB-203ENST00000558867 IGKV2-40A0A087WW87 121 aaPredicted RBP11.4□□□□□ -0.58
CDC42BPB-203ENST00000558867 TRBV7-9A0A0J9YWB2 115 aa11.4□□□□□ -0.58
CDC42BPB-203ENST00000558867 A8MWL6 223 aa11.4□□□□□ -0.58
CDC42BPB-203ENST00000558867 PHOX2AO14813 284 aa11.4□□□□□ -0.58
CDC42BPB-203ENST00000558867 IGKV2D-40P01614 121 aaPredicted RBP11.4□□□□□ -0.58
CDC42BPB-203ENST00000558867 P01737 135 aa11.4□□□□□ -0.58
CDC42BPB-203ENST00000558867 RASL11AQ6T310 242 aa11.4□□□□□ -0.58
CDC42BPB-203ENST00000558867 ZNF705AQ6ZN79 300 aaPredicted RBP11.4□□□□□ -0.58
CDC42BPB-203ENST00000558867 DAZAP1Q96EP5 407 aaKnown RBP11.4□□□□□ -0.58
CDC42BPB-203ENST00000558867 NDFIP1Q9BT67 221 aa11.4□□□□□ -0.58
CDC42BPB-203ENST00000558867 KRTAP4-5Q9BYR2 181 aa11.4□□□□□ -0.58
CDC42BPB-203ENST00000558867 IGHV3OR16-12A0A075B7B8 117 aa11.39□□□□□ -0.59
CDC42BPB-203ENST00000558867 ZNF705FA8MVS1 300 aaPredicted RBP11.39□□□□□ -0.59
CDC42BPB-203ENST00000558867 CT45A10P0DMU9 189 aa11.39□□□□□ -0.59
CDC42BPB-203ENST00000558867 HLA-DRB4P13762 266 aa11.39□□□□□ -0.59
CDC42BPB-203ENST00000558867 ID1P41134 155 aa11.39□□□□□ -0.59
CDC42BPB-203ENST00000558867 PRR27Q6MZM9 219 aa11.39□□□□□ -0.59
CDC42BPB-203ENST00000558867 RNF182Q8N6D2 247 aa11.39□□□□□ -0.59
CDC42BPB-203ENST00000558867 MAPKAPK5-AS1Q8N8E1 139 aa11.39□□□□□ -0.59
CDC42BPB-203ENST00000558867 VGLL1Q99990 258 aa11.39□□□□□ -0.59
CDC42BPB-203ENST00000558867 SAV1Q9H4B6 383 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms