RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 DKK2Q9UBU2 259 aa12.48□□□□□ -0.41
TPM1-214ENST00000558544 COX8CQ7Z4L0 72 aa12.47□□□□□ -0.41
TPM1-214ENST00000558544 C11orf21Q9P2W6 132 aa12.47□□□□□ -0.41
TPM1-214ENST00000558544 SNURFLB1AK76 121 aa12.46□□□□□ -0.41
TPM1-214ENST00000558544 SPART-AS1P0CW21 52 aa12.46□□□□□ -0.41
TPM1-214ENST00000558544 CENPWQ5EE01 88 aa12.46□□□□□ -0.41
TPM1-214ENST00000558544 C11orf72Q8NBR9 251 aa12.46□□□□□ -0.41
TPM1-214ENST00000558544 GSN-AS1Q9NRJ2 163 aa12.46□□□□□ -0.41
TPM1-214ENST00000558544 F8W036 122 aa12.45□□□□□ -0.42
TPM1-214ENST00000558544 CRIP1P50238 77 aa12.45□□□□□ -0.42
TPM1-214ENST00000558544 CEBPGP53567 150 aa12.45□□□□□ -0.42
TPM1-214ENST00000558544 TDRG1Q3Y452 100 aa12.45□□□□□ -0.42
TPM1-214ENST00000558544 ZFAND6Q6FIF0 208 aa12.45□□□□□ -0.42
TPM1-214ENST00000558544 MLST8Q9BVC4 326 aa12.45□□□□□ -0.42
TPM1-214ENST00000558544 SEC11CQ9BY50 192 aa12.45□□□□□ -0.42
TPM1-214ENST00000558544 NOP10Q9NPE3 64 aaKnown RBP12.45□□□□□ -0.42
TPM1-214ENST00000558544 CARHSP1Q9Y2V2 147 aaKnown RBP12.45□□□□□ -0.42
TPM1-214ENST00000558544 TIMM8BQ9Y5J9 83 aaPredicted RBP12.45□□□□□ -0.42
TPM1-214ENST00000558544 DYNC2H1Q8NCM8 4307 aaKnown RBP12.45□□□□□ -0.42
TPM1-214ENST00000558544 TRGV11A0A075B6L2 103 aa12.44□□□□□ -0.42
TPM1-214ENST00000558544 TEX48A0A1B0GUV7 120 aa12.44□□□□□ -0.42
TPM1-214ENST00000558544 LYRM9A8MSI8 78 aa12.44□□□□□ -0.42
TPM1-214ENST00000558544 FABP5P3A8MUU1 101 aa12.44□□□□□ -0.42
TPM1-214ENST00000558544 TMEM250H0YL14 139 aa12.44□□□□□ -0.42
TPM1-214ENST00000558544 SH2D1AO60880 128 aa12.44□□□□□ -0.42
TPM1-214ENST00000558544 NDUFS6O75380 124 aaKnown RBP12.44□□□□□ -0.42
TPM1-214ENST00000558544 TYMSP04818 313 aa12.44□□□□□ -0.42
TPM1-214ENST00000558544 GNG4P50150 75 aa12.44□□□□□ -0.42
TPM1-214ENST00000558544 ZNF674Q2M3X9 581 aa12.44□□□□□ -0.42
TPM1-214ENST00000558544 C12orf74Q32Q52 190 aa12.44□□□□□ -0.42
TPM1-214ENST00000558544 FAM162BQ5T6X4 162 aa12.44□□□□□ -0.42
TPM1-214ENST00000558544 KCNS1Q96KK3 526 aa12.44□□□□□ -0.42
TPM1-214ENST00000558544 PARLQ9H300 379 aa12.44□□□□□ -0.42
TPM1-214ENST00000558544 SDF2L1Q9HCN8 221 aa12.44□□□□□ -0.42
TPM1-214ENST00000558544 TRBV20OR9-2A0A075B6H5 130 aa12.43□□□□□ -0.42
TPM1-214ENST00000558544 GNRH2O43555 120 aa12.43□□□□□ -0.42
TPM1-214ENST00000558544 TCL1AP56279 114 aa12.43□□□□□ -0.42
TPM1-214ENST00000558544 ZNF415Q09FC8 603 aa12.43□□□□□ -0.42
TPM1-214ENST00000558544 IBA57Q5T440 356 aaKnown RBP12.43□□□□□ -0.42
TPM1-214ENST00000558544 PRR27Q6MZM9 219 aa12.43□□□□□ -0.42
TPM1-214ENST00000558544 Q6ZTC4 211 aa12.43□□□□□ -0.42
TPM1-214ENST00000558544 MDFICQ9P1T7 246 aa12.43□□□□□ -0.42
TPM1-214ENST00000558544 PGPEP1LA6NFU8 196 aa12.43□□□□□ -0.42
TPM1-214ENST00000558544 IGLV2-8P01709 118 aa12.43□□□□□ -0.42
TPM1-214ENST00000558544 PLECQ15149 4684 aaKnown RBP12.42□□□□□ -0.42
TPM1-214ENST00000558544 M0R036 132 aa12.42□□□□□ -0.42
TPM1-214ENST00000558544 APOC3P02656 99 aa12.42□□□□□ -0.42
TPM1-214ENST00000558544 ORM1P02763 201 aa12.42□□□□□ -0.42
TPM1-214ENST00000558544 DEFB130BP0DP73 79 aa12.42□□□□□ -0.42
TPM1-214ENST00000558544 DEFB130AP0DP74 79 aa12.42□□□□□ -0.42
TPM1-214ENST00000558544 MGST1P10620 155 aaKnown RBP12.42□□□□□ -0.42
TPM1-214ENST00000558544 DAD1P61803 113 aa12.42□□□□□ -0.42
TPM1-214ENST00000558544 SOHLH1Q5JUK2 328 aa12.42□□□□□ -0.42
TPM1-214ENST00000558544 IGKV3D-20A0A0C4DH25 116 aa12.41□□□□□ -0.42
TPM1-214ENST00000558544 IGHV3-16A0A0C4DH30 117 aa12.41□□□□□ -0.42
TPM1-214ENST00000558544 C3orf84H3BNL1 204 aa12.41□□□□□ -0.42
TPM1-214ENST00000558544 DAZ2Q13117 558 aaKnown RBP12.41□□□□□ -0.42
TPM1-214ENST00000558544 PHLDA1Q8WV24 401 aaPredicted RBP12.41□□□□□ -0.42
TPM1-214ENST00000558544 B4DEV8 164 aa12.4□□□□□ -0.42
TPM1-214ENST00000558544 C9JCJ5 164 aa12.4□□□□□ -0.42
TPM1-214ENST00000558544 Q6ZTI0 123 aa12.4□□□□□ -0.42
TPM1-214ENST00000558544 SMIM12Q96EX1 92 aa12.4□□□□□ -0.42
TPM1-214ENST00000558544 TMSB15BA0A087X1C1 80 aa12.39□□□□□ -0.43
TPM1-214ENST00000558544 TRGV1A0A0A0MS02 117 aa12.39□□□□□ -0.43
TPM1-214ENST00000558544 GAGE12BA1L429 117 aa12.39□□□□□ -0.43
TPM1-214ENST00000558544 GAGE7O76087 117 aa12.39□□□□□ -0.43
TPM1-214ENST00000558544 GAGE12FP0CL80 117 aa12.39□□□□□ -0.43
TPM1-214ENST00000558544 GAGE12GP0CL81 117 aa12.39□□□□□ -0.43
TPM1-214ENST00000558544 GAGE12IP0CL82 117 aa12.39□□□□□ -0.43
TPM1-214ENST00000558544 CASC10Q5T4H9 136 aa12.39□□□□□ -0.43
TPM1-214ENST00000558544 ATRAIDQ6UW56 229 aa12.39□□□□□ -0.43
TPM1-214ENST00000558544 MRPL16Q9NX20 251 aaKnown RBP12.39□□□□□ -0.43
TPM1-214ENST00000558544 MUC4Q99102 2169 aa12.39□□□□□ -0.43
TPM1-214ENST00000558544 SPINK4O60575 86 aa12.38□□□□□ -0.43
TPM1-214ENST00000558544 RPL19P84098 196 aaKnown RBP12.38□□□□□ -0.43
TPM1-214ENST00000558544 LINC01559Q495D7 138 aa12.38□□□□□ -0.43
TPM1-214ENST00000558544 LINC00612Q8N6U2 182 aa12.38□□□□□ -0.43
TPM1-214ENST00000558544 SMIM7Q9BQ49 75 aa12.38□□□□□ -0.43
TPM1-214ENST00000558544 TENM2Q9NT68 2774 aa12.37□□□□□ -0.43
TPM1-214ENST00000558544 TRAV10A0A0B4J240 114 aa12.37□□□□□ -0.43
TPM1-214ENST00000558544 GRIFINA4D1Z8 144 aa12.37□□□□□ -0.43
TPM1-214ENST00000558544 NUPR2A6NF83 97 aa12.37□□□□□ -0.43
TPM1-214ENST00000558544 HTN3P15516 51 aa12.37□□□□□ -0.43
TPM1-214ENST00000558544 OR5I1Q13606 314 aa12.37□□□□□ -0.43
TPM1-214ENST00000558544 OCC1Q8TAD7 63 aa12.37□□□□□ -0.43
TPM1-214ENST00000558544 SPXQ9BT56 116 aa12.37□□□□□ -0.43
TPM1-214ENST00000558544 DEFB131BA0A096LNP1 70 aa12.36□□□□□ -0.43
TPM1-214ENST00000558544 ZNF727A8MUV8 499 aa12.36□□□□□ -0.43
TPM1-214ENST00000558544 K7EN84 100 aa12.36□□□□□ -0.43
TPM1-214ENST00000558544 RNASE3P12724 160 aaKnown RBP12.36□□□□□ -0.43
TPM1-214ENST00000558544 S100A4P26447 101 aaKnown RBP12.36□□□□□ -0.43
TPM1-214ENST00000558544 ASIPP42127 132 aa12.36□□□□□ -0.43
TPM1-214ENST00000558544 CEMP1Q6PRD7 247 aaPredicted RBP12.36□□□□□ -0.43
TPM1-214ENST00000558544 SVBPQ8N300 66 aa12.36□□□□□ -0.43
TPM1-214ENST00000558544 SCO1O75880 301 aa12.35□□□□□ -0.43
TPM1-214ENST00000558544 CLRN3Q8NCR9 226 aa12.35□□□□□ -0.43
TPM1-214ENST00000558544 C9orf85Q96MD7 179 aa12.35□□□□□ -0.43
TPM1-214ENST00000558544 BIN3Q9NQY0 253 aa12.35□□□□□ -0.43
TPM1-214ENST00000558544 NACAE9PAV3 2078 aa12.35□□□□□ -0.43
TPM1-214ENST00000558544 C19orf71A6NCJ1 209 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms