RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 U3KQA8 63 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 CACNA1GO43497 2377 aa2.43□□□□□ -2.02
HERC1-203ENST00000558532 TNCP24821 2201 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 MYO9BQ13459 2157 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 IGHV4-4A0A075B6R2 117 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 TRAV8-1A0A0A6YYK1 113 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 IGHV5-10-1A0A0J9YXX1 117 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 PINLYPA6NC86 204 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 NCBP2LA6PVI3 153 aaKnown RBP2.42□□□□□ -2.02
HERC1-203ENST00000558532 KRTAP16-1A8MUX0 517 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 A8MWV9 139 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 E7EUB6 86 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 ATP6V0E1O15342 81 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 TCL1BO95988 128 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 IGLV2-23P01705 113 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 IGHV3-13P01766 116 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 IGHV3-9P01782 118 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 IGKV1-16P04430 117 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 LGALS1P09382 135 aaKnown RBP2.42□□□□□ -2.02
HERC1-203ENST00000558532 IFITM1P13164 125 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 PRTN3P24158 256 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 LEPP41159 167 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 IL11RAQ14626 422 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 C5orf47Q569G3 176 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 DEFB121Q5J5C9 76 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 UTF1Q5T230 341 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 LYZL1Q6UWQ5 148 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 GOLT1AQ6ZVE7 132 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 GTSCR1Q86UQ5 136 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 NDUFA11Q86Y39 141 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 SLC25A45Q8N413 288 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 C10orf126Q8N4M7 172 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 PTH2Q96A98 100 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 ODF3Q96PU9 254 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 LINC01587Q99440 93 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 HIST1H4GQ99525 98 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 FOXC2Q99958 501 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 SHANK2-AS3Q9BTD1 123 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 TPPP3Q9BW30 176 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 IMUPQ9GZP8 106 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 MRPL35Q9NZE8 188 aaKnown RBP2.42□□□□□ -2.02
HERC1-203ENST00000558532 HIGD1AQ9Y241 93 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 PCNX2A6NKB5 2137 aa2.42□□□□□ -2.02
HERC1-203ENST00000558532 KNTC1P50748 2209 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 ASCC3Q8N3C0 2202 aaKnown RBP2.41□□□□□ -2.02
HERC1-203ENST00000558532 NAV3Q8IVL0 2385 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 IGHV3OR15-7A0A075B7D8 119 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 TRAV4A0A0B4J268 109 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 TRAV40A0A0B4J280 105 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 A0A0B4J2C4 111 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 LOC389332A0A1B0GUA5 103 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 LINC01549A6NIU2 74 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 H7C1H1 209 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 M0R2P5 195 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 SLC25A20O43772 301 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 SH2D1AO60880 128 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 CRLF1O75462 422 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 SNCGO76070 127 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 CNIH1O95406 144 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 TFF1P04155 84 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 CRYGBP07316 175 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 VPREB1P12018 145 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 CD59P13987 128 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 HLA-DMBP28068 263 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 CKS2P33552 79 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 RPS28P62857 69 aaKnown RBP2.41□□□□□ -2.02
HERC1-203ENST00000558532 PLGLAQ15195 96 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 FAM201AQ5SY85 155 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 FAM159AQ6UWV7 190 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 SDIM1Q6ZPB5 146 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 PRNTQ86SH4 94 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 TDHQ8IZJ6 230 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 LRRC75A-AS1Q8N1F1 130 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 BAALCQ8WXS3 180 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 KIR2DL4Q99706 377 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 OPRPNQ99935 248 aaPredicted RBP2.41□□□□□ -2.02
HERC1-203ENST00000558532 FAM173AQ9BQD7 235 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 HINT2Q9BX68 163 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 MRPL20Q9BYC9 149 aaKnown RBP2.41□□□□□ -2.02
HERC1-203ENST00000558532 AKIRIN1Q9H9L7 192 aaPredicted RBP2.41□□□□□ -2.02
HERC1-203ENST00000558532 NGBQ9NPG2 151 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 SIGLEC9Q9Y336 463 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 CSDC2Q9Y534 153 aaKnown RBP2.41□□□□□ -2.02
HERC1-203ENST00000558532 DSCAMO60469 2012 aa2.41□□□□□ -2.02
HERC1-203ENST00000558532 CACNA1DQ01668 2161 aa2.4□□□□□ -2.02
HERC1-203ENST00000558532 PRR14LQ5THK1 2151 aa2.4□□□□□ -2.02
HERC1-203ENST00000558532 A0A087WW49 117 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 TRAV25A0A0B4J276 109 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 IGHV1-69DA0A0B4J2H0 117 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 A0A0J9YY99 117 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 SMKR1H3BMG3 65 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 H3BT86 120 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 I3L2K1 104 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 M0R381 172 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 LGALS9O00182 355 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 DUSP14O95147 198 aaKnown RBP2.4□□□□□ -2.03
HERC1-203ENST00000558532 IGKV1-17P01599 117 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 IGHV3-30P01768 117 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 ATP5G1P05496 136 aa2.4□□□□□ -2.03
HERC1-203ENST00000558532 SCGB1C2P0DMR2 95 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms