RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 MRPL35Q9NZE8 188 aaKnown RBP11.99□□□□□ -0.49
AP4E1-202ENST00000558439 ORMDL2Q53FV1 153 aa11.99□□□□□ -0.49
AP4E1-202ENST00000558439 SPOCK3Q9BQ16 436 aa11.99□□□□□ -0.49
AP4E1-202ENST00000558439 SPATA12Q7Z6I5 190 aa11.99□□□□□ -0.49
AP4E1-202ENST00000558439 COX6B1P14854 86 aa11.98□□□□□ -0.49
AP4E1-202ENST00000558439 BLCAPP62952 87 aa11.98□□□□□ -0.49
AP4E1-202ENST00000558439 CSTL1Q9H114 145 aa11.98□□□□□ -0.49
AP4E1-202ENST00000558439 DPH3P1Q9H4G8 78 aa11.98□□□□□ -0.49
AP4E1-202ENST00000558439 MRPL16Q9NX20 251 aaKnown RBP11.98□□□□□ -0.49
AP4E1-202ENST00000558439 ANXA2RQ3ZCQ2 193 aa11.98□□□□□ -0.49
AP4E1-202ENST00000558439 C11orf44Q8N8P7 122 aa11.98□□□□□ -0.49
AP4E1-202ENST00000558439 Q8N976 141 aa11.98□□□□□ -0.49
AP4E1-202ENST00000558439 IGHV3-64A0A075B6Q5 118 aa11.97□□□□□ -0.49
AP4E1-202ENST00000558439 CHAC1Q9BUX1 264 aa11.97□□□□□ -0.49
AP4E1-202ENST00000558439 FAM223BA6NKX1 122 aa11.97□□□□□ -0.49
AP4E1-202ENST00000558439 FAM223AQ8IWN6 122 aa11.97□□□□□ -0.49
AP4E1-202ENST00000558439 IGHV3-73A0A0B4J1V6 119 aa11.97□□□□□ -0.49
AP4E1-202ENST00000558439 IGHV4-61A0A0C4DH41 118 aa11.97□□□□□ -0.49
AP4E1-202ENST00000558439 ZNF815PA8K554 130 aa11.97□□□□□ -0.49
AP4E1-202ENST00000558439 LGALS3P17931 250 aaKnown RBP11.97□□□□□ -0.49
AP4E1-202ENST00000558439 FBXL19-AS1Q494R0 122 aa11.97□□□□□ -0.49
AP4E1-202ENST00000558439 TMEM238LA0A1B0GVL6 79 aa11.97□□□□□ -0.49
AP4E1-202ENST00000558439 A6NJY4 79 aa11.97□□□□□ -0.49
AP4E1-202ENST00000558439 K7EMI3 77 aa11.97□□□□□ -0.49
AP4E1-202ENST00000558439 TMEM95Q3KNT9 176 aa11.97□□□□□ -0.49
AP4E1-202ENST00000558439 Q8N8P6 123 aa11.97□□□□□ -0.49
AP4E1-202ENST00000558439 SCRT2Q9NQ03 307 aa11.97□□□□□ -0.49
AP4E1-202ENST00000558439 LRRK2Q5S007 2527 aa11.96□□□□□ -0.49
AP4E1-202ENST00000558439 GNRH2O43555 120 aa11.96□□□□□ -0.49
AP4E1-202ENST00000558439 CST9LQ9H4G1 147 aa11.96□□□□□ -0.49
AP4E1-202ENST00000558439 LOC400499M0QZD8 3231 aa11.96□□□□□ -0.49
AP4E1-202ENST00000558439 IGHV4-38-2P0DP08 117 aa11.96□□□□□ -0.5
AP4E1-202ENST00000558439 DAZ1Q9NQZ3 744 aaKnown RBP11.96□□□□□ -0.5
AP4E1-202ENST00000558439 NPIPB6E9PJ23 425 aa11.95□□□□□ -0.5
AP4E1-202ENST00000558439 SMPXQ9UHP9 88 aa11.95□□□□□ -0.5
AP4E1-202ENST00000558439 PPP1R17O96001 155 aa11.95□□□□□ -0.5
AP4E1-202ENST00000558439 RNASE8Q8TDE3 154 aaKnown RBP11.95□□□□□ -0.5
AP4E1-202ENST00000558439 URB1-AS1Q96HZ7 61 aa11.95□□□□□ -0.5
AP4E1-202ENST00000558439 ZNF479Q96JC4 524 aa11.95□□□□□ -0.5
AP4E1-202ENST00000558439 SIRPDQ9H106 197 aa11.95□□□□□ -0.5
AP4E1-202ENST00000558439 ZNF292O60281 2723 aa11.95□□□□□ -0.5
AP4E1-202ENST00000558439 TRAV12-2A0A075B6T6 113 aa11.95□□□□□ -0.5
AP4E1-202ENST00000558439 ODF3BA8MYP8 253 aa11.95□□□□□ -0.5
AP4E1-202ENST00000558439 FSTL3O95633 263 aa11.95□□□□□ -0.5
AP4E1-202ENST00000558439 SUMO2P61956 95 aaKnown RBP11.95□□□□□ -0.5
AP4E1-202ENST00000558439 PIP4P2Q8N4L2 257 aa11.95□□□□□ -0.5
AP4E1-202ENST00000558439 DEFB125Q8N687 156 aa11.95□□□□□ -0.5
AP4E1-202ENST00000558439 ZNF418Q8TF45 676 aaPredicted RBP11.95□□□□□ -0.5
AP4E1-202ENST00000558439 USMG5Q96IX5 58 aa11.95□□□□□ -0.5
AP4E1-202ENST00000558439 MAP1AP78559 2803 aaPredicted RBP11.95□□□□□ -0.5
AP4E1-202ENST00000558439 SYNJ2BPP57105 145 aa11.94□□□□□ -0.5
AP4E1-202ENST00000558439 BEX4Q9NWD9 120 aaPredicted RBP11.94□□□□□ -0.5
AP4E1-202ENST00000558439 B4DSR2 109 aa11.94□□□□□ -0.5
AP4E1-202ENST00000558439 K7ERJ3 54 aa11.94□□□□□ -0.5
AP4E1-202ENST00000558439 TRBV12-3P01733 135 aa11.94□□□□□ -0.5
AP4E1-202ENST00000558439 MSMBP08118 114 aa11.94□□□□□ -0.5
AP4E1-202ENST00000558439 MRGPRG-AS1Q2M3A8 158 aa11.94□□□□□ -0.5
AP4E1-202ENST00000558439 MTURNQ8N3F0 131 aa11.94□□□□□ -0.5
AP4E1-202ENST00000558439 IGHV4-39P01824 125 aa11.94□□□□□ -0.5
AP4E1-202ENST00000558439 WDFY3Q8IZQ1 3526 aa11.94□□□□□ -0.5
AP4E1-202ENST00000558439 C2orf66Q6UXQ4 117 aa11.93□□□□□ -0.5
AP4E1-202ENST00000558439 A0A1B0GWB2 263 aa11.93□□□□□ -0.5
AP4E1-202ENST00000558439 H7C1H1 209 aa11.93□□□□□ -0.5
AP4E1-202ENST00000558439 ITLN2Q8WWU7 325 aaPredicted RBP11.93□□□□□ -0.5
AP4E1-202ENST00000558439 NRGNQ92686 78 aa11.93□□□□□ -0.5
AP4E1-202ENST00000558439 UNQ9165/PRO28630Q6UXU0 137 aa11.93□□□□□ -0.5
AP4E1-202ENST00000558439 DUX3Q96PT4 197 aa11.93□□□□□ -0.5
AP4E1-202ENST00000558439 TAX1BP3O14907 124 aa11.92□□□□□ -0.5
AP4E1-202ENST00000558439 OCIAD2Q56VL3 154 aa11.92□□□□□ -0.5
AP4E1-202ENST00000558439 A0A1W2PRX2 142 aa11.92□□□□□ -0.5
AP4E1-202ENST00000558439 CCDC140Q96MF4 163 aa11.92□□□□□ -0.5
AP4E1-202ENST00000558439 SMAD5-AS1Q9Y6J3 95 aa11.92□□□□□ -0.5
AP4E1-202ENST00000558439 SPINK13Q1W4C9 94 aa11.92□□□□□ -0.5
AP4E1-202ENST00000558439 C5orf56Q8N8D9 126 aa11.92□□□□□ -0.5
AP4E1-202ENST00000558439 KLK9Q9UKQ9 250 aa11.92□□□□□ -0.5
AP4E1-202ENST00000558439 SMIM2Q9BVW6 85 aa11.91□□□□□ -0.5
AP4E1-202ENST00000558439 LYRM7Q5U5X0 104 aa11.91□□□□□ -0.5
AP4E1-202ENST00000558439 RPL39LQ96EH5 51 aaKnown RBP11.91□□□□□ -0.5
AP4E1-202ENST00000558439 PTPRBP23467 1997 aa11.91□□□□□ -0.5
AP4E1-202ENST00000558439 ADGRG4Q8IZF6 3080 aa11.91□□□□□ -0.5
AP4E1-202ENST00000558439 NDUFA4O00483 81 aa11.91□□□□□ -0.5
AP4E1-202ENST00000558439 TRBV6-1A0A0K0K1D8 114 aa11.9□□□□□ -0.5
AP4E1-202ENST00000558439 PLNP26678 52 aa11.9□□□□□ -0.5
AP4E1-202ENST00000558439 LMO4P61968 165 aa11.9□□□□□ -0.5
AP4E1-202ENST00000558439 TNFRSF18Q9Y5U5 241 aa11.9□□□□□ -0.5
AP4E1-202ENST00000558439 C9orf118A6NHY6 69 aa11.9□□□□□ -0.5
AP4E1-202ENST00000558439 IGF1P05019 195 aa11.9□□□□□ -0.5
AP4E1-202ENST00000558439 AKAP13Q12802 2813 aa11.9□□□□□ -0.5
AP4E1-202ENST00000558439 IGKV3D-20A0A0C4DH25 116 aa11.9□□□□□ -0.5
AP4E1-202ENST00000558439 C19orf84I3L1E1 186 aa11.9□□□□□ -0.5
AP4E1-202ENST00000558439 H3BRM9 83 aa11.89□□□□□ -0.51
AP4E1-202ENST00000558439 GAS8-AS1O95177 125 aa11.89□□□□□ -0.51
AP4E1-202ENST00000558439 IGHV4-30-2A0A087WSY4 118 aa11.89□□□□□ -0.51
AP4E1-202ENST00000558439 HOXA3O43365 443 aaPredicted RBP11.89□□□□□ -0.51
AP4E1-202ENST00000558439 LINC01559Q495D7 138 aa11.89□□□□□ -0.51
AP4E1-202ENST00000558439 ZNF876PQ49A33 203 aa11.89□□□□□ -0.51
AP4E1-202ENST00000558439 ZNF493Q6ZR52 646 aa11.89□□□□□ -0.51
AP4E1-202ENST00000558439 KNCNA6PVL3 124 aa11.89□□□□□ -0.51
AP4E1-202ENST00000558439 LINC01587Q99440 93 aa11.89□□□□□ -0.51
AP4E1-202ENST00000558439 VCX2Q9H322 139 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms