RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 CXorf1O96002 111 aa8.18□□□□□ -1.1
HERC1-202ENST00000558324 LINC00315P59091 139 aa8.18□□□□□ -1.1
HERC1-202ENST00000558324 SERF2P84101 59 aa8.18□□□□□ -1.1
HERC1-202ENST00000558324 MRPL23Q16540 153 aaKnown RBP8.18□□□□□ -1.1
HERC1-202ENST00000558324 TDRG1Q3Y452 100 aa8.18□□□□□ -1.1
HERC1-202ENST00000558324 NEGR1Q7Z3B1 354 aa8.18□□□□□ -1.1
HERC1-202ENST00000558324 ARL6IP6Q8N6S5 226 aa8.18□□□□□ -1.1
HERC1-202ENST00000558324 PCNPQ8WW12 178 aaKnown RBP8.18□□□□□ -1.1
HERC1-202ENST00000558324 RASL10AQ92737 203 aa8.18□□□□□ -1.1
HERC1-202ENST00000558324 TMEM167BQ9NRX6 74 aa8.18□□□□□ -1.1
HERC1-202ENST00000558324 TNFSF18Q9UNG2 199 aa8.18□□□□□ -1.1
HERC1-202ENST00000558324 SERTM2A0A1B0GWG4 89 aa8.17□□□□□ -1.1
HERC1-202ENST00000558324 A0A1W2PPQ1 181 aa8.17□□□□□ -1.1
HERC1-202ENST00000558324 K7EQD1 137 aa8.17□□□□□ -1.1
HERC1-202ENST00000558324 M0R2P5 195 aa8.17□□□□□ -1.1
HERC1-202ENST00000558324 GYPEP15421 78 aa8.17□□□□□ -1.1
HERC1-202ENST00000558324 SRIP30626 198 aa8.17□□□□□ -1.1
HERC1-202ENST00000558324 ZNF80P51504 273 aaPredicted RBP8.17□□□□□ -1.1
HERC1-202ENST00000558324 SUMO1P63165 101 aaKnown RBP8.17□□□□□ -1.1
HERC1-202ENST00000558324 LYPD5Q6UWN5 251 aa8.17□□□□□ -1.1
HERC1-202ENST00000558324 SPATA12Q7Z6I5 190 aa8.17□□□□□ -1.1
HERC1-202ENST00000558324 PRNTQ86SH4 94 aa8.17□□□□□ -1.1
HERC1-202ENST00000558324 TMEM75Q8N9X5 138 aa8.17□□□□□ -1.1
HERC1-202ENST00000558324 OR4C5Q8NGB2 326 aa8.17□□□□□ -1.1
HERC1-202ENST00000558324 ASB13Q8WXK3 278 aa8.17□□□□□ -1.1
HERC1-202ENST00000558324 PSG8Q9UQ74 426 aa8.17□□□□□ -1.1
HERC1-202ENST00000558324 TRAV4A0A0B4J268 109 aa8.16□□□□□ -1.1
HERC1-202ENST00000558324 C9JCJ5 164 aa8.16□□□□□ -1.1
HERC1-202ENST00000558324 GCGP01275 180 aa8.16□□□□□ -1.1
HERC1-202ENST00000558324 UBE2G2P60604 165 aa8.16□□□□□ -1.1
HERC1-202ENST00000558324 FLI1Q01543 452 aaPredicted RBP8.16□□□□□ -1.1
HERC1-202ENST00000558324 ZNF726P1Q15940 193 aa8.16□□□□□ -1.1
HERC1-202ENST00000558324 RGS21Q2M5E4 152 aa8.16□□□□□ -1.1
HERC1-202ENST00000558324 ZFP69Q49AA0 526 aa8.16□□□□□ -1.1
HERC1-202ENST00000558324 CYB561D1Q8N8Q1 229 aa8.16□□□□□ -1.1
HERC1-202ENST00000558324 SUN5Q8TC36 379 aa8.16□□□□□ -1.1
HERC1-202ENST00000558324 KCNS1Q96KK3 526 aa8.16□□□□□ -1.1
HERC1-202ENST00000558324 MUC4Q99102 2169 aa8.16□□□□□ -1.1
HERC1-202ENST00000558324 C11orf21Q9P2W6 132 aa8.16□□□□□ -1.1
HERC1-202ENST00000558324 EPDR1Q9UM22 224 aa8.16□□□□□ -1.1
HERC1-202ENST00000558324 LOC100131303A0A0U1RQF7 123 aa8.15□□□□□ -1.1
HERC1-202ENST00000558324 ARPC5O15511 151 aa8.15□□□□□ -1.1
HERC1-202ENST00000558324 IFNA7P01567 189 aa8.15□□□□□ -1.1
HERC1-202ENST00000558324 IGLV2-11P01706 119 aa8.15□□□□□ -1.1
HERC1-202ENST00000558324 FGF8P55075 233 aaPredicted RBP8.15□□□□□ -1.1
HERC1-202ENST00000558324 WFDC10BQ8IUB3 73 aa8.15□□□□□ -1.1
HERC1-202ENST00000558324 PCLOQ9Y6V0 5065 aa8.15□□□□□ -1.11
HERC1-202ENST00000558324 TRAV34A0A0B4J273 112 aa8.14□□□□□ -1.11
HERC1-202ENST00000558324 CTXND1A0A1B0GTU2 59 aa8.14□□□□□ -1.11
HERC1-202ENST00000558324 G3V3Q6 166 aa8.14□□□□□ -1.11
HERC1-202ENST00000558324 SMLR1H3BR10 107 aa8.14□□□□□ -1.11
HERC1-202ENST00000558324 TAAR5O14804 337 aa8.14□□□□□ -1.11
HERC1-202ENST00000558324 ORM1P02763 201 aa8.14□□□□□ -1.11
HERC1-202ENST00000558324 PFN1P07737 140 aaKnown RBP8.14□□□□□ -1.11
HERC1-202ENST00000558324 ZNF876PQ49A33 203 aa8.14□□□□□ -1.11
HERC1-202ENST00000558324 SMUG1Q53HV7 270 aa8.14□□□□□ -1.11
HERC1-202ENST00000558324 AKR1C8PQ5T2L2 129 aa8.14□□□□□ -1.11
HERC1-202ENST00000558324 NHLRC2Q8NBF2 726 aa8.14□□□□□ -1.11
HERC1-202ENST00000558324 LINC00479Q96M42 142 aa8.14□□□□□ -1.11
HERC1-202ENST00000558324 TNFRSF18Q9Y5U5 241 aa8.14□□□□□ -1.11
HERC1-202ENST00000558324 RYR1P21817 5038 aa8.14□□□□□ -1.11
HERC1-202ENST00000558324 LRP1BQ9NZR2 4599 aa8.13□□□□□ -1.11
HERC1-202ENST00000558324 IGHV3-73A0A0B4J1V6 119 aa8.13□□□□□ -1.11
HERC1-202ENST00000558324 A0A1W2PRE2 83 aa8.13□□□□□ -1.11
HERC1-202ENST00000558324 KRTAP10-2P60368 255 aa8.13□□□□□ -1.11
HERC1-202ENST00000558324 ARL2-SNX15V9GYD0 113 aa8.13□□□□□ -1.11
HERC1-202ENST00000558324 FBLL1A6NHQ2 334 aaKnown RBP8.12□□□□□ -1.11
HERC1-202ENST00000558324 BTF3P20290 206 aaKnown RBP8.12□□□□□ -1.11
HERC1-202ENST00000558324 SAPCD1Q5SSQ6 148 aa8.12□□□□□ -1.11
HERC1-202ENST00000558324 DPPA3Q6W0C5 159 aa8.12□□□□□ -1.11
HERC1-202ENST00000558324 Q6ZRN7 208 aaPredicted RBP8.12□□□□□ -1.11
HERC1-202ENST00000558324 TXNDC17Q9BRA2 123 aa8.12□□□□□ -1.11
HERC1-202ENST00000558324 LY96Q9Y6Y9 160 aa8.12□□□□□ -1.11
HERC1-202ENST00000558324 HSPG2P98160 4391 aa8.12□□□□□ -1.11
HERC1-202ENST00000558324 MAP1LC3B2A6NCE7 125 aa8.11□□□□□ -1.11
HERC1-202ENST00000558324 PEX7O00628 323 aa8.11□□□□□ -1.11
HERC1-202ENST00000558324 GATA1P15976 413 aaPredicted RBP8.11□□□□□ -1.11
HERC1-202ENST00000558324 FUSP35637 526 aaKnown RBP eCLIP8.11□□□□□ -1.11
HERC1-202ENST00000558324 PPT1P50897 306 aa8.11□□□□□ -1.11
HERC1-202ENST00000558324 ZNF506Q5JVG8 444 aa8.11□□□□□ -1.11
HERC1-202ENST00000558324 CFAP126Q5VTH2 177 aa8.11□□□□□ -1.11
HERC1-202ENST00000558324 Q86TA4 180 aa8.11□□□□□ -1.11
HERC1-202ENST00000558324 C9orf85Q96MD7 179 aa8.11□□□□□ -1.11
HERC1-202ENST00000558324 MAP1LC3BQ9GZQ8 125 aa8.11□□□□□ -1.11
HERC1-202ENST00000558324 CYTL1Q9NRR1 136 aa8.11□□□□□ -1.11
HERC1-202ENST00000558324 TRAV9-2A0A087WT02 112 aa8.1□□□□□ -1.11
HERC1-202ENST00000558324 PGPEP1LA6NFU8 196 aa8.1□□□□□ -1.11
HERC1-202ENST00000558324 FAM74A7A6NL05 159 aa8.1□□□□□ -1.11
HERC1-202ENST00000558324 RS1O15537 224 aa8.1□□□□□ -1.11
HERC1-202ENST00000558324 RNASE3P12724 160 aaKnown RBP8.1□□□□□ -1.11
HERC1-202ENST00000558324 EVI2AP22794 236 aa8.1□□□□□ -1.11
HERC1-202ENST00000558324 SLC25A29Q8N8R3 303 aa8.1□□□□□ -1.11
HERC1-202ENST00000558324 IGKV3D-20A0A0C4DH25 116 aa8.09□□□□□ -1.11
HERC1-202ENST00000558324 CDK2AP2O75956 126 aa8.09□□□□□ -1.11
HERC1-202ENST00000558324 DNAH10OSP0CZ25 163 aa8.09□□□□□ -1.11
HERC1-202ENST00000558324 S100A4P26447 101 aaKnown RBP8.09□□□□□ -1.11
HERC1-202ENST00000558324 FHITP49789 147 aa8.09□□□□□ -1.11
HERC1-202ENST00000558324 ERVFC1-1P60608 527 aa8.09□□□□□ -1.11
HERC1-202ENST00000558324 RHOHQ15669 191 aa8.09□□□□□ -1.11
HERC1-202ENST00000558324 PRADC1Q9BSG0 188 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms