RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 ABCA7Q8IZY2 2146 aa9.29□□□□□ -0.92
CSPG4P12-201ENST00000558282 DOCK6Q96HP0 2047 aa9.29□□□□□ -0.92
CSPG4P12-201ENST00000558282 IGHV3-53P01767 116 aa9.29□□□□□ -0.92
CSPG4P12-201ENST00000558282 ZNF134P52741 427 aa9.29□□□□□ -0.92
CSPG4P12-201ENST00000558282 ATP5EP56381 51 aaPredicted RBP9.29□□□□□ -0.92
CSPG4P12-201ENST00000558282 CFHR1Q03591 330 aa9.29□□□□□ -0.92
CSPG4P12-201ENST00000558282 TIMM17AQ99595 171 aa9.29□□□□□ -0.92
CSPG4P12-201ENST00000558282 ZNF672Q499Z4 452 aaPredicted RBP9.28□□□□□ -0.92
CSPG4P12-201ENST00000558282 ATP5EP2Q5VTU8 51 aa9.28□□□□□ -0.92
CSPG4P12-201ENST00000558282 KLHL30-AS1Q8NEE0 82 aa9.28□□□□□ -0.92
CSPG4P12-201ENST00000558282 CRYGCP07315 174 aa9.28□□□□□ -0.92
CSPG4P12-201ENST00000558282 ZNF491Q8N8L2 437 aa9.28□□□□□ -0.92
CSPG4P12-201ENST00000558282 TOMM6Q96B49 74 aa9.28□□□□□ -0.92
CSPG4P12-201ENST00000558282 TTTY13Q9BZ97 58 aa9.28□□□□□ -0.92
CSPG4P12-201ENST00000558282 CREBBPQ92793 2442 aa9.28□□□□□ -0.92
CSPG4P12-201ENST00000558282 C17orf82Q86X59 251 aaPredicted RBP9.28□□□□□ -0.92
CSPG4P12-201ENST00000558282 C8orf31Q8N9H6 132 aa9.28□□□□□ -0.92
CSPG4P12-201ENST00000558282 Q8TCH9 128 aa9.28□□□□□ -0.92
CSPG4P12-201ENST00000558282 FUSP35637 526 aaKnown RBP eCLIP9.28□□□□□ -0.92
CSPG4P12-201ENST00000558282 C17orf58Q2M2W7 97 aa9.28□□□□□ -0.92
CSPG4P12-201ENST00000558282 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.27□□□□□ -0.92
CSPG4P12-201ENST00000558282 MSRB2Q9Y3D2 182 aa9.27□□□□□ -0.92
CSPG4P12-201ENST00000558282 CENPFP49454 3210 aa9.27□□□□□ -0.92
CSPG4P12-201ENST00000558282 COX6B1P14854 86 aa9.27□□□□□ -0.93
CSPG4P12-201ENST00000558282 ASPHD1Q5U4P2 390 aa9.27□□□□□ -0.93
CSPG4P12-201ENST00000558282 VWCEQ96DN2 955 aa9.27□□□□□ -0.93
CSPG4P12-201ENST00000558282 C20orf173Q96LM9 149 aa9.27□□□□□ -0.93
CSPG4P12-201ENST00000558282 PKIGQ9Y2B9 76 aa9.27□□□□□ -0.93
CSPG4P12-201ENST00000558282 PLXNA3P51805 1871 aa9.27□□□□□ -0.93
CSPG4P12-201ENST00000558282 NDUFA4O00483 81 aa9.27□□□□□ -0.93
CSPG4P12-201ENST00000558282 GP9P14770 177 aa9.27□□□□□ -0.93
CSPG4P12-201ENST00000558282 DOCK10Q96BY6 2186 aa9.27□□□□□ -0.93
CSPG4P12-201ENST00000558282 NXPH4O95158 308 aa9.27□□□□□ -0.93
CSPG4P12-201ENST00000558282 Q6ZS92 163 aa9.27□□□□□ -0.93
CSPG4P12-201ENST00000558282 LYPD6Q86Y78 171 aa9.27□□□□□ -0.93
CSPG4P12-201ENST00000558282 IGLC6P0CF74 106 aa9.26□□□□□ -0.93
CSPG4P12-201ENST00000558282 OPRPNQ99935 248 aaPredicted RBP9.26□□□□□ -0.93
CSPG4P12-201ENST00000558282 GPR179Q6PRD1 2367 aa9.26□□□□□ -0.93
CSPG4P12-201ENST00000558282 A0A1B0GXF2 115 aa9.26□□□□□ -0.93
CSPG4P12-201ENST00000558282 ZNRF2Q8NHG8 242 aa9.26□□□□□ -0.93
CSPG4P12-201ENST00000558282 DOCK7Q96N67 2140 aa9.26□□□□□ -0.93
CSPG4P12-201ENST00000558282 CADP27708 2225 aa9.26□□□□□ -0.93
CSPG4P12-201ENST00000558282 DAD1P61803 113 aa9.26□□□□□ -0.93
CSPG4P12-201ENST00000558282 NKAPP1Q8N9T2 125 aa9.26□□□□□ -0.93
CSPG4P12-201ENST00000558282 U3KQE9 123 aa9.26□□□□□ -0.93
CSPG4P12-201ENST00000558282 HEATR1Q9H583 2144 aaKnown RBP9.26□□□□□ -0.93
CSPG4P12-201ENST00000558282 GATA1P15976 413 aaPredicted RBP9.26□□□□□ -0.93
CSPG4P12-201ENST00000558282 C11orf1Q9H5F2 150 aa9.26□□□□□ -0.93
CSPG4P12-201ENST00000558282 SND1-IT1Q9HBX3 110 aa9.26□□□□□ -0.93
CSPG4P12-201ENST00000558282 GREB1Q4ZG55 1949 aa9.26□□□□□ -0.93
CSPG4P12-201ENST00000558282 ZNF561-AS1K7EIQ3 104 aa9.25□□□□□ -0.93
CSPG4P12-201ENST00000558282 OVOL3O00110 214 aa9.25□□□□□ -0.93
CSPG4P12-201ENST00000558282 INTS1Q8N201 2190 aaKnown RBP9.25□□□□□ -0.93
CSPG4P12-201ENST00000558282 BAALCQ8WXS3 180 aa9.25□□□□□ -0.93
CSPG4P12-201ENST00000558282 LYNX1G3V0Z9 82 aa9.25□□□□□ -0.93
CSPG4P12-201ENST00000558282 LYNX1P0DP58 116 aa9.25□□□□□ -0.93
CSPG4P12-201ENST00000558282 RSPO1Q2MKA7 263 aaPredicted RBP9.25□□□□□ -0.93
CSPG4P12-201ENST00000558282 Q6Q795 121 aa9.25□□□□□ -0.93
CSPG4P12-201ENST00000558282 AGPAT4-IT1Q9H0P7 198 aa9.25□□□□□ -0.93
CSPG4P12-201ENST00000558282 KIAA2026Q5HYC2 2103 aa9.25□□□□□ -0.93
CSPG4P12-201ENST00000558282 LTBRP36941 435 aa9.25□□□□□ -0.93
CSPG4P12-201ENST00000558282 TEX36Q5VZQ5 186 aa9.25□□□□□ -0.93
CSPG4P12-201ENST00000558282 F5H768 121 aa9.24□□□□□ -0.93
CSPG4P12-201ENST00000558282 Q6ZSR3 168 aa9.24□□□□□ -0.93
CSPG4P12-201ENST00000558282 FANCMQ8IYD8 2048 aa9.24□□□□□ -0.93
CSPG4P12-201ENST00000558282 PLCE1Q9P212 2302 aa9.24□□□□□ -0.93
CSPG4P12-201ENST00000558282 PRR19A6NJB7 356 aa9.24□□□□□ -0.93
CSPG4P12-201ENST00000558282 NDUFC1O43677 76 aa9.24□□□□□ -0.93
CSPG4P12-201ENST00000558282 PTPRDP23468 1912 aa9.24□□□□□ -0.93
CSPG4P12-201ENST00000558282 SPINK13Q1W4C9 94 aa9.24□□□□□ -0.93
CSPG4P12-201ENST00000558282 DENND4AQ7Z401 1863 aa9.24□□□□□ -0.93
CSPG4P12-201ENST00000558282 A0A0J9YXV3 536 aa9.23□□□□□ -0.93
CSPG4P12-201ENST00000558282 NREPQ16612 68 aa9.23□□□□□ -0.93
CSPG4P12-201ENST00000558282 C20orf197Q8N268 126 aa9.23□□□□□ -0.93
CSPG4P12-201ENST00000558282 FAM167A-AS1Q96KT0 104 aa9.23□□□□□ -0.93
CSPG4P12-201ENST00000558282 PKDREJQ9NTG1 2253 aa9.23□□□□□ -0.93
CSPG4P12-201ENST00000558282 Q6ZR03 302 aa9.23□□□□□ -0.93
CSPG4P12-201ENST00000558282 TMEM61Q8N0U2 210 aa9.23□□□□□ -0.93
CSPG4P12-201ENST00000558282 PIP4P2Q8N4L2 257 aa9.23□□□□□ -0.93
CSPG4P12-201ENST00000558282 TMEM256-PLSCR3K7ERE1 68 aa9.23□□□□□ -0.93
CSPG4P12-201ENST00000558282 CLEC2BQ92478 149 aa9.23□□□□□ -0.93
CSPG4P12-201ENST00000558282 MED13LQ71F56 2210 aa9.23□□□□□ -0.93
CSPG4P12-201ENST00000558282 C19orf71A6NCJ1 209 aa9.22□□□□□ -0.93
CSPG4P12-201ENST00000558282 DEFB131AP59861 70 aa9.22□□□□□ -0.93
CSPG4P12-201ENST00000558282 C1orf195Q5TG92 126 aa9.22□□□□□ -0.93
CSPG4P12-201ENST00000558282 WDR86Q86TI4 376 aa9.22□□□□□ -0.93
CSPG4P12-201ENST00000558282 THSD7BQ9C0I4 1608 aa9.22□□□□□ -0.93
CSPG4P12-201ENST00000558282 IGHV1-69P01742 117 aa9.22□□□□□ -0.93
CSPG4P12-201ENST00000558282 P0DMU3 169 aa9.22□□□□□ -0.93
CSPG4P12-201ENST00000558282 FAM231AP0DMU4 169 aa9.22□□□□□ -0.93
CSPG4P12-201ENST00000558282 FAM231CP0DMU5 169 aa9.22□□□□□ -0.93
CSPG4P12-201ENST00000558282 MED14OSP0DP75 135 aa9.22□□□□□ -0.93
CSPG4P12-201ENST00000558282 KLK9Q9UKQ9 250 aa9.22□□□□□ -0.93
CSPG4P12-201ENST00000558282 DOCK8Q8NF50 2099 aa9.22□□□□□ -0.93
CSPG4P12-201ENST00000558282 TRBV12-3P01733 135 aa9.22□□□□□ -0.93
CSPG4P12-201ENST00000558282 SERP2Q8N6R1 65 aa9.22□□□□□ -0.93
CSPG4P12-201ENST00000558282 ZNF503Q96F45 646 aa9.22□□□□□ -0.93
CSPG4P12-201ENST00000558282 C11orf44Q8N8P7 122 aa9.21□□□□□ -0.93
CSPG4P12-201ENST00000558282 ATP6V0E1O15342 81 aa9.21□□□□□ -0.93
CSPG4P12-201ENST00000558282 FRMD6-AS1P0C7T7 363 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms