RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 CXorf65A6NEN9 183 aa7.51□□□□□ -1.21
LRRC28-204ENST00000558172 LYRM9A8MSI8 78 aa7.51□□□□□ -1.21
LRRC28-204ENST00000558172 ZNF727A8MUV8 499 aa7.51□□□□□ -1.21
LRRC28-204ENST00000558172 SH2D1AO60880 128 aa7.51□□□□□ -1.21
LRRC28-204ENST00000558172 IGLV2-8P01709 118 aa7.51□□□□□ -1.21
LRRC28-204ENST00000558172 ORM1P02763 201 aa7.51□□□□□ -1.21
LRRC28-204ENST00000558172 PRM2P04554 102 aa7.51□□□□□ -1.21
LRRC28-204ENST00000558172 MGST1P10620 155 aaKnown RBP7.51□□□□□ -1.21
LRRC28-204ENST00000558172 EMP1P54849 157 aa7.51□□□□□ -1.21
LRRC28-204ENST00000558172 SRSF3P84103 164 aaKnown RBP7.51□□□□□ -1.21
LRRC28-204ENST00000558172 ZNF415Q09FC8 603 aa7.51□□□□□ -1.21
LRRC28-204ENST00000558172 C11orf45Q8TAV5 145 aa7.51□□□□□ -1.21
LRRC28-204ENST00000558172 SMIM7Q9BQ49 75 aa7.51□□□□□ -1.21
LRRC28-204ENST00000558172 TP53TG3Q9ULZ0 132 aa7.51□□□□□ -1.21
LRRC28-204ENST00000558172 LY96Q9Y6Y9 160 aa7.51□□□□□ -1.21
LRRC28-204ENST00000558172 PLAC8L1A1L4L8 177 aa7.5□□□□□ -1.21
LRRC28-204ENST00000558172 TYMSP04818 313 aa7.5□□□□□ -1.21
LRRC28-204ENST00000558172 TCL1AP56279 114 aa7.5□□□□□ -1.21
LRRC28-204ENST00000558172 DAZ2Q13117 558 aaKnown RBP7.5□□□□□ -1.21
LRRC28-204ENST00000558172 LINC01559Q495D7 138 aa7.5□□□□□ -1.21
LRRC28-204ENST00000558172 PRR27Q6MZM9 219 aa7.5□□□□□ -1.21
LRRC28-204ENST00000558172 UQCC3Q6UW78 93 aa7.5□□□□□ -1.21
LRRC28-204ENST00000558172 C11orf72Q8NBR9 251 aa7.5□□□□□ -1.21
LRRC28-204ENST00000558172 OCC1Q8TAD7 63 aa7.5□□□□□ -1.21
LRRC28-204ENST00000558172 DAZAP1Q96EP5 407 aaKnown RBP7.5□□□□□ -1.21
LRRC28-204ENST00000558172 SPXQ9BT56 116 aa7.5□□□□□ -1.21
LRRC28-204ENST00000558172 GSN-AS1Q9NRJ2 163 aa7.5□□□□□ -1.21
LRRC28-204ENST00000558172 C11orf21Q9P2W6 132 aa7.5□□□□□ -1.21
LRRC28-204ENST00000558172 DKK2Q9UBU2 259 aa7.5□□□□□ -1.21
LRRC28-204ENST00000558172 DNAH7Q8WXX0 4024 aa7.49□□□□□ -1.21
LRRC28-204ENST00000558172 IGKV3D-20A0A0C4DH25 116 aa7.49□□□□□ -1.21
LRRC28-204ENST00000558172 PGPEP1LA6NFU8 196 aa7.49□□□□□ -1.21
LRRC28-204ENST00000558172 B4DEV8 164 aa7.49□□□□□ -1.21
LRRC28-204ENST00000558172 KRBOX1C9JBD0 128 aa7.49□□□□□ -1.21
LRRC28-204ENST00000558172 C9JQL5 133 aa7.49□□□□□ -1.21
LRRC28-204ENST00000558172 GNRH2O43555 120 aa7.49□□□□□ -1.21
LRRC28-204ENST00000558172 TMEM241Q24JQ0 296 aa7.49□□□□□ -1.21
LRRC28-204ENST00000558172 SOHLH1Q5JUK2 328 aa7.49□□□□□ -1.21
LRRC28-204ENST00000558172 DNLZQ5SXM8 178 aa7.49□□□□□ -1.21
LRRC28-204ENST00000558172 FAM222AQ5U5X8 452 aa7.49□□□□□ -1.21
LRRC28-204ENST00000558172 NOP10Q9NPE3 64 aaKnown RBP7.49□□□□□ -1.21
LRRC28-204ENST00000558172 MUC4Q99102 2169 aa7.49□□□□□ -1.21
LRRC28-204ENST00000558172 IGHV3-16A0A0C4DH30 117 aa7.48□□□□□ -1.21
LRRC28-204ENST00000558172 LINC00862A6NCI5 91 aa7.48□□□□□ -1.21
LRRC28-204ENST00000558172 C19orf71A6NCJ1 209 aa7.48□□□□□ -1.21
LRRC28-204ENST00000558172 CXCL1P09341 107 aa7.48□□□□□ -1.21
LRRC28-204ENST00000558172 S100A4P26447 101 aaKnown RBP7.48□□□□□ -1.21
LRRC28-204ENST00000558172 OR5I1Q13606 314 aa7.48□□□□□ -1.21
LRRC28-204ENST00000558172 LGALS9BQ3B8N2 356 aa7.48□□□□□ -1.21
LRRC28-204ENST00000558172 MDFICQ9P1T7 246 aa7.48□□□□□ -1.21
LRRC28-204ENST00000558172 NAT8Q9UHE5 227 aa7.48□□□□□ -1.21
LRRC28-204ENST00000558172 M0R036 132 aa7.47□□□□□ -1.21
LRRC28-204ENST00000558172 SPINK4O60575 86 aa7.47□□□□□ -1.21
LRRC28-204ENST00000558172 P01737 135 aa7.47□□□□□ -1.21
LRRC28-204ENST00000558172 ASIPP42127 132 aa7.47□□□□□ -1.21
LRRC28-204ENST00000558172 RPS20P60866 119 aaKnown RBP7.47□□□□□ -1.21
LRRC28-204ENST00000558172 DAD1P61803 113 aa7.47□□□□□ -1.21
LRRC28-204ENST00000558172 C12orf74Q32Q52 190 aa7.47□□□□□ -1.21
LRRC28-204ENST00000558172 CELA1Q9UNI1 258 aa7.47□□□□□ -1.21
LRRC28-204ENST00000558172 XKRY2A2RUG3 117 aa7.46□□□□□ -1.22
LRRC28-204ENST00000558172 K7EN84 100 aa7.46□□□□□ -1.22
LRRC28-204ENST00000558172 M0R2P5 195 aa7.46□□□□□ -1.22
LRRC28-204ENST00000558172 SFTA3P0C7M3 94 aa7.46□□□□□ -1.22
LRRC28-204ENST00000558172 MED14OSP0DP75 135 aa7.46□□□□□ -1.22
LRRC28-204ENST00000558172 NANOS2P60321 138 aaKnown RBP7.46□□□□□ -1.22
LRRC28-204ENST00000558172 FAM231DQ6ZW35 169 aa7.46□□□□□ -1.22
LRRC28-204ENST00000558172 LINC01551Q86U37 167 aa7.46□□□□□ -1.22
LRRC28-204ENST00000558172 COMMD7Q86VX2 200 aa7.46□□□□□ -1.22
LRRC28-204ENST00000558172 LINC00612Q8N6U2 182 aa7.46□□□□□ -1.22
LRRC28-204ENST00000558172 NUDT10Q8NFP7 164 aa7.46□□□□□ -1.22
LRRC28-204ENST00000558172 MUC7Q8TAX7 377 aa7.46□□□□□ -1.22
LRRC28-204ENST00000558172 PTH2Q96A98 100 aa7.46□□□□□ -1.22
LRRC28-204ENST00000558172 NUDT11Q96G61 164 aa7.46□□□□□ -1.22
LRRC28-204ENST00000558172 C9orf85Q96MD7 179 aa7.46□□□□□ -1.22
LRRC28-204ENST00000558172 C18orf15Q96N68 181 aa7.46□□□□□ -1.22
LRRC28-204ENST00000558172 NDUFAF3Q9BU61 184 aa7.46□□□□□ -1.22
LRRC28-204ENST00000558172 IL36BQ9NZH7 164 aa7.46□□□□□ -1.22
LRRC28-204ENST00000558172 TMSB15BA0A087X1C1 80 aa7.45□□□□□ -1.22
LRRC28-204ENST00000558172 TRGV1A0A0A0MS02 117 aa7.45□□□□□ -1.22
LRRC28-204ENST00000558172 GRIFINA4D1Z8 144 aa7.45□□□□□ -1.22
LRRC28-204ENST00000558172 C3orf84H3BNL1 204 aa7.45□□□□□ -1.22
LRRC28-204ENST00000558172 DEFB130BP0DP73 79 aa7.45□□□□□ -1.22
LRRC28-204ENST00000558172 DEFB130AP0DP74 79 aa7.45□□□□□ -1.22
LRRC28-204ENST00000558172 RNASE3P12724 160 aaKnown RBP7.45□□□□□ -1.22
LRRC28-204ENST00000558172 RPL23P62829 140 aaKnown RBP7.45□□□□□ -1.22
LRRC28-204ENST00000558172 PIK3CD-AS1Q5SR53 167 aa7.45□□□□□ -1.22
LRRC28-204ENST00000558172 ZNF575Q86XF7 245 aa7.45□□□□□ -1.22
LRRC28-204ENST00000558172 OR2D3Q8NGH3 330 aa7.45□□□□□ -1.22
LRRC28-204ENST00000558172 RASL10AQ92737 203 aa7.45□□□□□ -1.22
LRRC28-204ENST00000558172 NACAE9PAV3 2078 aa7.44□□□□□ -1.22
LRRC28-204ENST00000558172 TRAV10A0A0B4J240 114 aa7.44□□□□□ -1.22
LRRC28-204ENST00000558172 GAGE12BA1L429 117 aa7.44□□□□□ -1.22
LRRC28-204ENST00000558172 GATCO43716 136 aaKnown RBP7.44□□□□□ -1.22
LRRC28-204ENST00000558172 GAGE7O76087 117 aa7.44□□□□□ -1.22
LRRC28-204ENST00000558172 ATP5G1P05496 136 aa7.44□□□□□ -1.22
LRRC28-204ENST00000558172 ARMS2P0C7Q2 107 aa7.44□□□□□ -1.22
LRRC28-204ENST00000558172 GAGE12FP0CL80 117 aa7.44□□□□□ -1.22
LRRC28-204ENST00000558172 GAGE12GP0CL81 117 aa7.44□□□□□ -1.22
LRRC28-204ENST00000558172 GAGE12IP0CL82 117 aa7.44□□□□□ -1.22
LRRC28-204ENST00000558172 ERVFC1-1P60608 527 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms