RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 CYTL1Q9NRR1 136 aa11.53□□□□□ -0.56
NEDD4-212ENST00000557845 ICOSQ9Y6W8 199 aa11.53□□□□□ -0.56
NEDD4-212ENST00000557845 TRGV4A0A0C4DH28 118 aa11.52□□□□□ -0.57
NEDD4-212ENST00000557845 CTXND1A0A1B0GTU2 59 aa11.52□□□□□ -0.57
NEDD4-212ENST00000557845 TYMSP04818 313 aa11.52□□□□□ -0.57
NEDD4-212ENST00000557845 KCNS1Q96KK3 526 aa11.52□□□□□ -0.57
NEDD4-212ENST00000557845 C8orf49Q96NF6 230 aa11.52□□□□□ -0.57
NEDD4-212ENST00000557845 SDF2L1Q9HCN8 221 aa11.52□□□□□ -0.57
NEDD4-212ENST00000557845 HERC2O95714 4834 aa11.51□□□□□ -0.57
NEDD4-212ENST00000557845 SMLR1H3BR10 107 aa11.51□□□□□ -0.57
NEDD4-212ENST00000557845 M0R2P5 195 aa11.51□□□□□ -0.57
NEDD4-212ENST00000557845 SFTA3P0C7M3 94 aa11.51□□□□□ -0.57
NEDD4-212ENST00000557845 ZNF80P51504 273 aaPredicted RBP11.51□□□□□ -0.57
NEDD4-212ENST00000557845 FLI1Q01543 452 aaPredicted RBP11.51□□□□□ -0.57
NEDD4-212ENST00000557845 AKR1C8PQ5T2L2 129 aa11.51□□□□□ -0.57
NEDD4-212ENST00000557845 CYB561D1Q8N8Q1 229 aa11.51□□□□□ -0.57
NEDD4-212ENST00000557845 ZNF479Q96JC4 524 aa11.51□□□□□ -0.57
NEDD4-212ENST00000557845 KIAA1109Q2LD37 5005 aa11.51□□□□□ -0.57
NEDD4-212ENST00000557845 FBLL1A6NHQ2 334 aaKnown RBP11.5□□□□□ -0.57
NEDD4-212ENST00000557845 GCGP01275 180 aa11.5□□□□□ -0.57
NEDD4-212ENST00000557845 TNP2Q05952 138 aa11.5□□□□□ -0.57
NEDD4-212ENST00000557845 PRNTQ86SH4 94 aa11.5□□□□□ -0.57
NEDD4-212ENST00000557845 TMEM75Q8N9X5 138 aa11.5□□□□□ -0.57
NEDD4-212ENST00000557845 DYNC1H1Q14204 4646 aaKnown RBP11.5□□□□□ -0.57
NEDD4-212ENST00000557845 FGF8P55075 233 aaPredicted RBP11.49□□□□□ -0.57
NEDD4-212ENST00000557845 MRPL23Q16540 153 aaKnown RBP11.49□□□□□ -0.57
NEDD4-212ENST00000557845 SMUG1Q53HV7 270 aa11.49□□□□□ -0.57
NEDD4-212ENST00000557845 TTC32Q5I0X7 151 aa11.49□□□□□ -0.57
NEDD4-212ENST00000557845 SAPCD1Q5SSQ6 148 aa11.49□□□□□ -0.57
NEDD4-212ENST00000557845 LYPD5Q6UWN5 251 aa11.49□□□□□ -0.57
NEDD4-212ENST00000557845 LINC00479Q96M42 142 aa11.49□□□□□ -0.57
NEDD4-212ENST00000557845 KRTAP1-5Q9BYS1 174 aa11.49□□□□□ -0.57
NEDD4-212ENST00000557845 C11orf21Q9P2W6 132 aa11.49□□□□□ -0.57
NEDD4-212ENST00000557845 TRAV4A0A0B4J268 109 aa11.48□□□□□ -0.57
NEDD4-212ENST00000557845 A0A1W2PPQ1 181 aa11.48□□□□□ -0.57
NEDD4-212ENST00000557845 IFNA7P01567 189 aa11.48□□□□□ -0.57
NEDD4-212ENST00000557845 PFN1P07737 140 aaKnown RBP11.48□□□□□ -0.57
NEDD4-212ENST00000557845 UBE2G2P60604 165 aa11.48□□□□□ -0.57
NEDD4-212ENST00000557845 ZFP69Q49AA0 526 aa11.48□□□□□ -0.57
NEDD4-212ENST00000557845 OR4C5Q8NGB2 326 aa11.48□□□□□ -0.57
NEDD4-212ENST00000557845 NKX6-2Q9C056 277 aaPredicted RBP11.48□□□□□ -0.57
NEDD4-212ENST00000557845 TRAV34A0A0B4J273 112 aa11.47□□□□□ -0.57
NEDD4-212ENST00000557845 FAM74A7A6NL05 159 aa11.47□□□□□ -0.57
NEDD4-212ENST00000557845 NEGR1Q7Z3B1 354 aa11.47□□□□□ -0.57
NEDD4-212ENST00000557845 KCNRGQ8N5I3 272 aa11.47□□□□□ -0.57
NEDD4-212ENST00000557845 MAP1LC3B2A6NCE7 125 aa11.46□□□□□ -0.57
NEDD4-212ENST00000557845 K7EQD1 137 aa11.46□□□□□ -0.57
NEDD4-212ENST00000557845 SIVA1O15304 175 aa11.46□□□□□ -0.57
NEDD4-212ENST00000557845 ZNF345Q14585 488 aa11.46□□□□□ -0.57
NEDD4-212ENST00000557845 OR11H4Q8NGC9 324 aa11.46□□□□□ -0.57
NEDD4-212ENST00000557845 MAP1LC3BQ9GZQ8 125 aa11.46□□□□□ -0.57
NEDD4-212ENST00000557845 PKHD1P08F94 4074 aa11.46□□□□□ -0.58
NEDD4-212ENST00000557845 DNAH11Q96DT5 4516 aa11.45□□□□□ -0.58
NEDD4-212ENST00000557845 HMSDA8MTL9 139 aa11.45□□□□□ -0.58
NEDD4-212ENST00000557845 C9JCJ5 164 aa11.45□□□□□ -0.58
NEDD4-212ENST00000557845 PEX7O00628 323 aa11.45□□□□□ -0.58
NEDD4-212ENST00000557845 ORM1P02763 201 aa11.45□□□□□ -0.58
NEDD4-212ENST00000557845 MED14OSP0DP75 135 aa11.45□□□□□ -0.58
NEDD4-212ENST00000557845 GYPEP15421 78 aa11.45□□□□□ -0.58
NEDD4-212ENST00000557845 PPT1P50897 306 aa11.45□□□□□ -0.58
NEDD4-212ENST00000557845 HIST1H2BAQ96A08 127 aa11.45□□□□□ -0.58
NEDD4-212ENST00000557845 ARL2-SNX15V9GYD0 113 aa11.45□□□□□ -0.58
NEDD4-212ENST00000557845 NXPH4O95158 308 aa11.44□□□□□ -0.58
NEDD4-212ENST00000557845 BTF3P20290 206 aaKnown RBP11.44□□□□□ -0.58
NEDD4-212ENST00000557845 SRIP30626 198 aa11.44□□□□□ -0.58
NEDD4-212ENST00000557845 ZNF876PQ49A33 203 aa11.44□□□□□ -0.58
NEDD4-212ENST00000557845 PCNPQ8WW12 178 aaKnown RBP11.44□□□□□ -0.58
NEDD4-212ENST00000557845 C9orf85Q96MD7 179 aa11.44□□□□□ -0.58
NEDD4-212ENST00000557845 A0A0D9SG52 128 aa11.43□□□□□ -0.58
NEDD4-212ENST00000557845 FABP5P3A8MUU1 101 aa11.43□□□□□ -0.58
NEDD4-212ENST00000557845 SEC11BP0C7V7 166 aa11.43□□□□□ -0.58
NEDD4-212ENST00000557845 FHITP49789 147 aa11.43□□□□□ -0.58
NEDD4-212ENST00000557845 STOML3Q8TAV4 291 aa11.43□□□□□ -0.58
NEDD4-212ENST00000557845 IGKV3D-20A0A0C4DH25 116 aa11.42□□□□□ -0.58
NEDD4-212ENST00000557845 PGPEP1LA6NFU8 196 aa11.42□□□□□ -0.58
NEDD4-212ENST00000557845 RS1O15537 224 aa11.42□□□□□ -0.58
NEDD4-212ENST00000557845 RNASE3P12724 160 aaKnown RBP11.42□□□□□ -0.58
NEDD4-212ENST00000557845 GATA1P15976 413 aaPredicted RBP11.42□□□□□ -0.58
NEDD4-212ENST00000557845 DPPA3Q6W0C5 159 aa11.42□□□□□ -0.58
NEDD4-212ENST00000557845 ZNF575Q86XF7 245 aa11.42□□□□□ -0.58
NEDD4-212ENST00000557845 PTH2Q96A98 100 aa11.42□□□□□ -0.58
NEDD4-212ENST00000557845 LOC100131303A0A0U1RQF7 123 aa11.41□□□□□ -0.58
NEDD4-212ENST00000557845 CIDEAO60543 219 aa11.41□□□□□ -0.58
NEDD4-212ENST00000557845 CFAP126Q5VTH2 177 aa11.41□□□□□ -0.58
NEDD4-212ENST00000557845 Q86TA4 180 aa11.41□□□□□ -0.58
NEDD4-212ENST00000557845 TXNDC17Q9BRA2 123 aa11.41□□□□□ -0.58
NEDD4-212ENST00000557845 ZFP30Q9Y2G7 519 aa11.41□□□□□ -0.58
NEDD4-212ENST00000557845 KANTRA0A1W2PQU2 76 aa11.4□□□□□ -0.58
NEDD4-212ENST00000557845 UMAD1C9J7I0 102 aa11.4□□□□□ -0.58
NEDD4-212ENST00000557845 BCL2L11O43521 198 aa11.4□□□□□ -0.58
NEDD4-212ENST00000557845 CRIP1P50238 77 aa11.4□□□□□ -0.58
NEDD4-212ENST00000557845 CST9LP1Q5W188 147 aa11.4□□□□□ -0.58
NEDD4-212ENST00000557845 MBD3L1Q8WWY6 194 aa11.4□□□□□ -0.58
NEDD4-212ENST00000557845 ZNF471Q9BX82 626 aaPredicted RBP11.4□□□□□ -0.58
NEDD4-212ENST00000557845 S100A4P26447 101 aaKnown RBP11.39□□□□□ -0.59
NEDD4-212ENST00000557845 LINC00315P59091 139 aa11.39□□□□□ -0.59
NEDD4-212ENST00000557845 ZNF506Q5JVG8 444 aa11.39□□□□□ -0.59
NEDD4-212ENST00000557845 COX8CQ7Z4L0 72 aa11.39□□□□□ -0.59
NEDD4-212ENST00000557845 SH2D6Q7Z4S9 175 aa11.39□□□□□ -0.59
NEDD4-212ENST00000557845 SLC25A29Q8N8R3 303 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms