RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 ZFHX2Q9C0A1 2572 aaPredicted RBP1.9□□□□□ -2.11
TDP1-217ENST00000557782 MROH2AA6NES4 1674 aa1.9□□□□□ -2.11
TDP1-217ENST00000557782 KDM5AP29375 1690 aaKnown RBP1.9□□□□□ -2.11
TDP1-217ENST00000557782 USP54Q70EL1 1684 aa1.9□□□□□ -2.11
TDP1-217ENST00000557782 PTPRFP10586 1907 aa1.89□□□□□ -2.11
TDP1-217ENST00000557782 TTC37Q6PGP7 1564 aa1.89□□□□□ -2.11
TDP1-217ENST00000557782 FREM1Q5H8C1 2179 aa1.89□□□□□ -2.11
TDP1-217ENST00000557782 MAGI2Q86UL8 1455 aa1.89□□□□□ -2.11
TDP1-217ENST00000557782 COL24A1Q17RW2 1714 aa1.89□□□□□ -2.11
TDP1-217ENST00000557782 ANKRD26Q9UPS8 1709 aa1.89□□□□□ -2.11
TDP1-217ENST00000557782 A0A1W2PNU3 283 aaPredicted RBP1.89□□□□□ -2.11
TDP1-217ENST00000557782 C9orf170A2RU37 121 aa1.89□□□□□ -2.11
TDP1-217ENST00000557782 EDF1O60869 148 aaKnown RBP1.89□□□□□ -2.11
TDP1-217ENST00000557782 ZNF833PQ6ZTB9 187 aa1.89□□□□□ -2.11
TDP1-217ENST00000557782 KCNRGQ8N5I3 272 aa1.89□□□□□ -2.11
TDP1-217ENST00000557782 TCTEX1D1Q8N7M0 179 aa1.89□□□□□ -2.11
TDP1-217ENST00000557782 SDF2Q99470 211 aa1.89□□□□□ -2.11
TDP1-217ENST00000557782 NAA38Q9BRA0 125 aaKnown RBP1.89□□□□□ -2.11
TDP1-217ENST00000557782 TCEAL7Q9BRU2 100 aa1.89□□□□□ -2.11
TDP1-217ENST00000557782 LSM2Q9Y333 95 aaKnown RBP1.89□□□□□ -2.11
TDP1-217ENST00000557782 ABCC2Q92887 1545 aa1.89□□□□□ -2.11
TDP1-217ENST00000557782 RGS12O14924 1447 aa1.89□□□□□ -2.11
TDP1-217ENST00000557782 BLMP54132 1417 aaPredicted RBP1.89□□□□□ -2.11
TDP1-217ENST00000557782 TROQ12816 1431 aaPredicted RBP1.89□□□□□ -2.11
TDP1-217ENST00000557782 PPRC1Q5VV67 1664 aaKnown RBP1.89□□□□□ -2.11
TDP1-217ENST00000557782 MUC4Q99102 2169 aa1.89□□□□□ -2.11
TDP1-217ENST00000557782 BRWD1Q9NSI6 2320 aa1.89□□□□□ -2.11
TDP1-217ENST00000557782 UHRF1BP1LA0JNW5 1464 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 PLEKHH2Q8IVE3 1493 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 MRC2Q9UBG0 1479 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 TRPM7Q96QT4 1865 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 CLTCL1P53675 1640 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 ABCA6Q8N139 1617 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 USP32Q8NFA0 1604 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 ADGRB3O60242 1522 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 DUOX2Q9NRD8 1548 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 COL4A5P29400 1685 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 F6UZH7 168 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 M0R2P5 195 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 HYPMO75409 117 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 FGF7P21781 194 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 CNBPP62633 177 aaKnown RBP1.88□□□□□ -2.11
TDP1-217ENST00000557782 MIR22HGQ0VDD5 57 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 KRTAP13-3Q3SY46 172 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 CCSMST1Q4G0I0 132 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 LINC01545Q5VT33 79 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 TEX261Q6UWH6 196 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 BRD3OSQ6XYD6 125 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 COA5Q86WW8 74 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 FAM19A2Q8N3H0 131 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 OR10AG1Q8NH19 301 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 Q8TAT8 98 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 COPS9Q8WXC6 57 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 PSMG3Q9BT73 122 aaPredicted RBP1.88□□□□□ -2.11
TDP1-217ENST00000557782 PDCD10Q9BUL8 212 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 FN1P02751 2386 aaKnown RBP1.88□□□□□ -2.11
TDP1-217ENST00000557782 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.88□□□□□ -2.11
TDP1-217ENST00000557782 ZNF518AQ6AHZ1 1483 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 CCDC141Q6ZP82 1450 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 NLRP1Q9C000 1473 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 MROH1Q8NDA8 1641 aa1.88□□□□□ -2.11
TDP1-217ENST00000557782 PPLO60437 1756 aa1.87□□□□□ -2.11
TDP1-217ENST00000557782 SYCP2Q9BX26 1530 aa1.87□□□□□ -2.11
TDP1-217ENST00000557782 TET3O43151 1660 aa1.87□□□□□ -2.11
TDP1-217ENST00000557782 QRICH2Q9H0J4 1663 aa1.87□□□□□ -2.11
TDP1-217ENST00000557782 TRBV6-8A0A0A6YYG3 113 aa1.87□□□□□ -2.11
TDP1-217ENST00000557782 ATP6V1G2-DDX39BF2Z307 99 aa1.87□□□□□ -2.11
TDP1-217ENST00000557782 J3QRE1 110 aa1.87□□□□□ -2.11
TDP1-217ENST00000557782 M0R129 80 aa1.87□□□□□ -2.11
TDP1-217ENST00000557782 CHD3Q12873 2000 aaKnown RBP1.87□□□□□ -2.11
TDP1-217ENST00000557782 OCIAD2Q56VL3 154 aa1.87□□□□□ -2.11
TDP1-217ENST00000557782 MEIG1Q5JSS6 88 aa1.87□□□□□ -2.11
TDP1-217ENST00000557782 KRTAP5-3Q6L8H2 238 aa1.87□□□□□ -2.11
TDP1-217ENST00000557782 ATP11AUNQ6ZP68 121 aa1.87□□□□□ -2.11
TDP1-217ENST00000557782 FOXI2Q6ZQN5 318 aa1.87□□□□□ -2.11
TDP1-217ENST00000557782 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.87□□□□□ -2.11
TDP1-217ENST00000557782 C12orf57Q99622 126 aa1.87□□□□□ -2.11
TDP1-217ENST00000557782 RERGLQ9H628 205 aa1.87□□□□□ -2.11
TDP1-217ENST00000557782 ORMDL1Q9P0S3 153 aa1.87□□□□□ -2.11
TDP1-217ENST00000557782 BAZ2BQ9UIF8 2168 aaKnown RBP1.87□□□□□ -2.11
TDP1-217ENST00000557782 LAMB4A4D0S4 1761 aa1.87□□□□□ -2.11
TDP1-217ENST00000557782 STRCP1A6NGW2 1772 aa1.87□□□□□ -2.11
TDP1-217ENST00000557782 MAGI1Q96QZ7 1491 aaPredicted RBP1.87□□□□□ -2.11
TDP1-217ENST00000557782 IFT140Q96RY7 1462 aa1.87□□□□□ -2.11
TDP1-217ENST00000557782 TRPM2O94759 1503 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 ALPK2Q86TB3 2170 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 ADGRB2O60241 1585 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 ATG2AQ2TAZ0 1938 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 ANKRD50Q9ULJ7 1429 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 ICE1Q9Y2F5 2266 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 A6NN06 94 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 F8W1H4 67 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 AKAIN1P0CW23 69 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 KRTAP1-1Q07627 177 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 FAM74A1Q5RGS3 127 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 C10orf55Q5SWW7 151 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 KRTAP26-1Q6PEX3 210 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 Q6ZUT4 128 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 Q8N2B8 174 aa1.86□□□□□ -2.11
TDP1-217ENST00000557782 ATP6V0E2Q8NHE4 81 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms