RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 RPL36ALQ969Q0 106 aaKnown RBP4.33□□□□□ -1.72
FOXN3-218ENST00000557718 ODF3Q96PU9 254 aa4.33□□□□□ -1.72
FOXN3-218ENST00000557718 SEC11CQ9BY50 192 aa4.33□□□□□ -1.72
FOXN3-218ENST00000557718 SDF2L1Q9HCN8 221 aa4.33□□□□□ -1.72
FOXN3-218ENST00000557718 TRAV12-2A0A075B6T6 113 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 C19orf71A6NCJ1 209 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 K7EIL1 84 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 M0R2Z0 102 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 GCGP01275 180 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 IGKV2-30P06310 120 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 S100A9P06702 114 aaKnown RBP4.32□□□□□ -1.72
FOXN3-218ENST00000557718 GNG4P50150 75 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 UBE2G1P62253 170 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 BTN1A1Q13410 526 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 SPINK13Q1W4C9 94 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 TMEM78Q5T7P6 136 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 GFI1BQ5VTD9 330 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 EBLN2Q6P2I7 272 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 BAGE2Q86Y30 109 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 OR4B1Q8NGF8 309 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 ISOC2Q96AB3 205 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 LINC00477Q96M19 166 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 SRD5A3Q9H8P0 318 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 NAT8Q9UHE5 227 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 LY96Q9Y6Y9 160 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 STAB2Q8WWQ8 2551 aa4.32□□□□□ -1.72
FOXN3-218ENST00000557718 TRBV7-9A0A0J9YWB2 115 aa4.31□□□□□ -1.72
FOXN3-218ENST00000557718 FBLL1A6NHQ2 334 aaKnown RBP4.31□□□□□ -1.72
FOXN3-218ENST00000557718 KRBOX1C9JBD0 128 aa4.31□□□□□ -1.72
FOXN3-218ENST00000557718 J3KRW8 73 aa4.31□□□□□ -1.72
FOXN3-218ENST00000557718 K7EQM0 130 aa4.31□□□□□ -1.72
FOXN3-218ENST00000557718 SH2D1AO60880 128 aa4.31□□□□□ -1.72
FOXN3-218ENST00000557718 DUSP14O95147 198 aaKnown RBP4.31□□□□□ -1.72
FOXN3-218ENST00000557718 RPL35AP18077 110 aaKnown RBP4.31□□□□□ -1.72
FOXN3-218ENST00000557718 CMC4P56277 68 aaPredicted RBP4.31□□□□□ -1.72
FOXN3-218ENST00000557718 TMEM241Q24JQ0 296 aa4.31□□□□□ -1.72
FOXN3-218ENST00000557718 FAM74A3Q4VXF1 159 aa4.31□□□□□ -1.72
FOXN3-218ENST00000557718 GTSCR1Q86UQ5 136 aa4.31□□□□□ -1.72
FOXN3-218ENST00000557718 CSNK1G2-AS1Q8NCQ2 148 aa4.31□□□□□ -1.72
FOXN3-218ENST00000557718 RNASE7Q9H1E1 156 aaKnown RBP4.31□□□□□ -1.72
FOXN3-218ENST00000557718 ZFP30Q9Y2G7 519 aa4.31□□□□□ -1.72
FOXN3-218ENST00000557718 LENEPQ9Y5L5 61 aa4.31□□□□□ -1.72
FOXN3-218ENST00000557718 DNAH7Q8WXX0 4024 aa4.3□□□□□ -1.72
FOXN3-218ENST00000557718 IGKV3D-20A0A0C4DH25 116 aa4.3□□□□□ -1.72
FOXN3-218ENST00000557718 A8MZ25 164 aa4.3□□□□□ -1.72
FOXN3-218ENST00000557718 ZNF324O75467 553 aaPredicted RBP4.3□□□□□ -1.72
FOXN3-218ENST00000557718 APOC3P02656 99 aa4.3□□□□□ -1.72
FOXN3-218ENST00000557718 PRM2P04554 102 aa4.3□□□□□ -1.72
FOXN3-218ENST00000557718 NHLRC4P0CG21 123 aaPredicted RBP4.3□□□□□ -1.72
FOXN3-218ENST00000557718 IGHV4-30-4P0DP06 118 aa4.3□□□□□ -1.72
FOXN3-218ENST00000557718 MGST1P10620 155 aaKnown RBP4.3□□□□□ -1.72
FOXN3-218ENST00000557718 RNASE4P34096 147 aaKnown RBP4.3□□□□□ -1.72
FOXN3-218ENST00000557718 CDKN1BP46527 198 aa4.3□□□□□ -1.72
FOXN3-218ENST00000557718 RPL19P84098 196 aaKnown RBP4.3□□□□□ -1.72
FOXN3-218ENST00000557718 ADIRFQ15847 76 aa4.3□□□□□ -1.72
FOXN3-218ENST00000557718 SMUG1Q53HV7 270 aa4.3□□□□□ -1.72
FOXN3-218ENST00000557718 SAPCD1Q5SSQ6 148 aa4.3□□□□□ -1.72
FOXN3-218ENST00000557718 Q6AWC8 147 aa4.3□□□□□ -1.72
FOXN3-218ENST00000557718 PRR27Q6MZM9 219 aa4.3□□□□□ -1.72
FOXN3-218ENST00000557718 FAM231DQ6ZW35 169 aa4.3□□□□□ -1.72
FOXN3-218ENST00000557718 STHQ8IWL8 128 aa4.3□□□□□ -1.72
FOXN3-218ENST00000557718 C1orf158Q8N1D5 194 aa4.3□□□□□ -1.72
FOXN3-218ENST00000557718 SMIM12Q96EX1 92 aa4.3□□□□□ -1.72
FOXN3-218ENST00000557718 NIPSNAP3BQ9BS92 247 aa4.3□□□□□ -1.72
FOXN3-218ENST00000557718 XCL2Q9UBD3 114 aa4.3□□□□□ -1.72
FOXN3-218ENST00000557718 V9GYV3 84 aa4.3□□□□□ -1.72
FOXN3-218ENST00000557718 TRAV12-3A0A0B4J271 114 aa4.29□□□□□ -1.72
FOXN3-218ENST00000557718 C7orf77A4D0Y5 90 aa4.29□□□□□ -1.72
FOXN3-218ENST00000557718 C7orf71A4D174 169 aa4.29□□□□□ -1.72
FOXN3-218ENST00000557718 CA1P00915 261 aaPredicted RBP4.29□□□□□ -1.72
FOXN3-218ENST00000557718 GPX1P07203 203 aa4.29□□□□□ -1.72
FOXN3-218ENST00000557718 MALP21145 153 aa4.29□□□□□ -1.72
FOXN3-218ENST00000557718 LEPP41159 167 aa4.29□□□□□ -1.72
FOXN3-218ENST00000557718 RNF212Q495C1 297 aa4.29□□□□□ -1.72
FOXN3-218ENST00000557718 OSTCQ9NRP0 149 aa4.29□□□□□ -1.72
FOXN3-218ENST00000557718 DYNC2H1Q8NCM8 4307 aaKnown RBP4.29□□□□□ -1.72
FOXN3-218ENST00000557718 FBN3Q75N90 2809 aa4.29□□□□□ -1.72
FOXN3-218ENST00000557718 LOC102724200A0A096LPH7 203 aaPredicted RBP4.28□□□□□ -1.72
FOXN3-218ENST00000557718 PRSS29PA6NIE9 313 aa4.28□□□□□ -1.72
FOXN3-218ENST00000557718 M0R036 132 aa4.28□□□□□ -1.72
FOXN3-218ENST00000557718 SCO1O75880 301 aa4.28□□□□□ -1.72
FOXN3-218ENST00000557718 TYMSP04818 313 aa4.28□□□□□ -1.72
FOXN3-218ENST00000557718 PFN1P07737 140 aaKnown RBP4.28□□□□□ -1.72
FOXN3-218ENST00000557718 FRMD6-AS1P0C7T7 363 aa4.28□□□□□ -1.72
FOXN3-218ENST00000557718 GZMBP10144 247 aa4.28□□□□□ -1.72
FOXN3-218ENST00000557718 PNRC1Q12796 327 aaPredicted RBP4.28□□□□□ -1.72
FOXN3-218ENST00000557718 ANXA2RQ3ZCQ2 193 aa4.28□□□□□ -1.72
FOXN3-218ENST00000557718 MUC21Q5SSG8 566 aa4.28□□□□□ -1.72
FOXN3-218ENST00000557718 IBA57Q5T440 356 aaKnown RBP4.28□□□□□ -1.72
FOXN3-218ENST00000557718 FAM162BQ5T6X4 162 aa4.28□□□□□ -1.72
FOXN3-218ENST00000557718 MORN3Q6PF18 240 aaPredicted RBP4.28□□□□□ -1.72
FOXN3-218ENST00000557718 ZNF705AQ6ZN79 300 aaPredicted RBP4.28□□□□□ -1.72
FOXN3-218ENST00000557718 GTSF1Q8WW33 167 aa4.28□□□□□ -1.72
FOXN3-218ENST00000557718 SFRP2Q96HF1 295 aa4.28□□□□□ -1.72
FOXN3-218ENST00000557718 NDFIP1Q9BT67 221 aa4.28□□□□□ -1.72
FOXN3-218ENST00000557718 TP53TG3Q9ULZ0 132 aa4.28□□□□□ -1.72
FOXN3-218ENST00000557718 TGP01266 2768 aa4.28□□□□□ -1.72
FOXN3-218ENST00000557718 TMSB15BA0A087X1C1 80 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 TRAV21A0A0B4J279 112 aa4.27□□□□□ -1.73
FOXN3-218ENST00000557718 KIR2DL5BA0A0G2JN68 375 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 269.5 ms