RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 TXNDC17Q9BRA2 123 aa11.77□□□□□ -0.53
NEK9-211ENST00000557673 KLF12Q9Y4X4 402 aa11.77□□□□□ -0.53
NEK9-211ENST00000557673 MEF2BQ02080 365 aaPredicted RBP11.76□□□□□ -0.53
NEK9-211ENST00000557673 TMEM263Q8WUH6 116 aaKnown RBP11.76□□□□□ -0.53
NEK9-211ENST00000557673 C16orf74Q96GX8 76 aa11.76□□□□□ -0.53
NEK9-211ENST00000557673 C8orf49Q96NF6 230 aa11.76□□□□□ -0.53
NEK9-211ENST00000557673 LINC00467Q9BRT7 94 aa11.76□□□□□ -0.53
NEK9-211ENST00000557673 IGLV2-18A0A075B6J9 118 aa11.75□□□□□ -0.53
NEK9-211ENST00000557673 TRBV6-1A0A0K0K1D8 114 aa11.75□□□□□ -0.53
NEK9-211ENST00000557673 PLAC8L1A1L4L8 177 aa11.75□□□□□ -0.53
NEK9-211ENST00000557673 AZU1P20160 251 aa11.75□□□□□ -0.53
NEK9-211ENST00000557673 TAGLN2P37802 199 aaKnown RBP11.75□□□□□ -0.53
NEK9-211ENST00000557673 UBE2G1P62253 170 aa11.75□□□□□ -0.53
NEK9-211ENST00000557673 TMEM183BQ1AE95 376 aa11.75□□□□□ -0.53
NEK9-211ENST00000557673 HTN1P15515 57 aa11.74□□□□□ -0.53
NEK9-211ENST00000557673 SAPCD1Q5SSQ6 148 aa11.74□□□□□ -0.53
NEK9-211ENST00000557673 C1orf134Q5TEV5 83 aa11.74□□□□□ -0.53
NEK9-211ENST00000557673 ZNF493Q6ZR52 646 aa11.74□□□□□ -0.53
NEK9-211ENST00000557673 VAX2Q9UIW0 290 aa11.74□□□□□ -0.53
NEK9-211ENST00000557673 DYNC1H1Q14204 4646 aaKnown RBP11.74□□□□□ -0.53
NEK9-211ENST00000557673 TRAV21A0A0B4J279 112 aa11.73□□□□□ -0.53
NEK9-211ENST00000557673 RGS13O14921 159 aa11.73□□□□□ -0.53
NEK9-211ENST00000557673 PDE6DO43924 150 aa11.73□□□□□ -0.53
NEK9-211ENST00000557673 GCGP01275 180 aa11.73□□□□□ -0.53
NEK9-211ENST00000557673 LTAP01374 205 aa11.73□□□□□ -0.53
NEK9-211ENST00000557673 HTN3P15516 51 aa11.73□□□□□ -0.53
NEK9-211ENST00000557673 ZNF80P51504 273 aaPredicted RBP11.73□□□□□ -0.53
NEK9-211ENST00000557673 SMUG1Q53HV7 270 aa11.73□□□□□ -0.53
NEK9-211ENST00000557673 EIF4E3Q8N5X7 224 aaKnown RBP11.73□□□□□ -0.53
NEK9-211ENST00000557673 KRTAP4-5Q9BYR2 181 aa11.73□□□□□ -0.53
NEK9-211ENST00000557673 PKD1P98161 4303 aa11.73□□□□□ -0.53
NEK9-211ENST00000557673 DNAH11Q96DT5 4516 aa11.72□□□□□ -0.53
NEK9-211ENST00000557673 IGHV1OR15-1A0A075B7D0 117 aa11.72□□□□□ -0.53
NEK9-211ENST00000557673 S100A9P06702 114 aaKnown RBP11.72□□□□□ -0.53
NEK9-211ENST00000557673 FAM3BP58499 235 aaPredicted RBP11.72□□□□□ -0.53
NEK9-211ENST00000557673 ANXA2RQ3ZCQ2 193 aa11.72□□□□□ -0.53
NEK9-211ENST00000557673 COX8CQ7Z4L0 72 aa11.72□□□□□ -0.53
NEK9-211ENST00000557673 PCNPQ8WW12 178 aaKnown RBP11.72□□□□□ -0.53
NEK9-211ENST00000557673 DERL1Q9BUN8 251 aa11.72□□□□□ -0.53
NEK9-211ENST00000557673 ZFP30Q9Y2G7 519 aa11.72□□□□□ -0.53
NEK9-211ENST00000557673 CBY3A6NI87 242 aa11.71□□□□□ -0.53
NEK9-211ENST00000557673 PFN1P07737 140 aaKnown RBP11.71□□□□□ -0.53
NEK9-211ENST00000557673 DAD1P61803 113 aa11.71□□□□□ -0.53
NEK9-211ENST00000557673 ZNF506Q5JVG8 444 aa11.71□□□□□ -0.53
NEK9-211ENST00000557673 MUC21Q5SSG8 566 aa11.71□□□□□ -0.53
NEK9-211ENST00000557673 ZNF575Q86XF7 245 aa11.71□□□□□ -0.53
NEK9-211ENST00000557673 C11orf72Q8NBR9 251 aa11.71□□□□□ -0.53
NEK9-211ENST00000557673 ZC2HC1AQ96GY0 325 aa11.71□□□□□ -0.53
NEK9-211ENST00000557673 NAGKQ9UJ70 344 aa11.71□□□□□ -0.53
NEK9-211ENST00000557673 RPL35P42766 123 aaKnown RBP11.7□□□□□ -0.54
NEK9-211ENST00000557673 TDRG1Q3Y452 100 aa11.7□□□□□ -0.54
NEK9-211ENST00000557673 TOR2AQ5JU69 321 aa11.7□□□□□ -0.54
NEK9-211ENST00000557673 TP53TG3Q9ULZ0 132 aa11.7□□□□□ -0.54
NEK9-211ENST00000557673 RBFOX3A6NFN3 312 aa11.69□□□□□ -0.54
NEK9-211ENST00000557673 LYRM9A8MSI8 78 aa11.69□□□□□ -0.54
NEK9-211ENST00000557673 IBA57Q5T440 356 aaKnown RBP11.69□□□□□ -0.54
NEK9-211ENST00000557673 FAM159AQ6UWV7 190 aa11.69□□□□□ -0.54
NEK9-211ENST00000557673 TMEM183AQ8IXX5 376 aa11.69□□□□□ -0.54
NEK9-211ENST00000557673 C15orf53Q8NAA6 179 aa11.69□□□□□ -0.54
NEK9-211ENST00000557673 FAM210AQ96ND0 272 aa11.69□□□□□ -0.54
NEK9-211ENST00000557673 C11orf21Q9P2W6 132 aa11.69□□□□□ -0.54
NEK9-211ENST00000557673 TIMM8BQ9Y5J9 83 aaPredicted RBP11.69□□□□□ -0.54
NEK9-211ENST00000557673 TCL1AP56279 114 aa11.68□□□□□ -0.54
NEK9-211ENST00000557673 NHLRC2Q8NBF2 726 aa11.68□□□□□ -0.54
NEK9-211ENST00000557673 MLST8Q9BVC4 326 aa11.68□□□□□ -0.54
NEK9-211ENST00000557673 GSN-AS1Q9NRJ2 163 aa11.68□□□□□ -0.54
NEK9-211ENST00000557673 TRGV11A0A075B6L2 103 aa11.67□□□□□ -0.54
NEK9-211ENST00000557673 SNURFLB1AK76 121 aa11.67□□□□□ -0.54
NEK9-211ENST00000557673 DEFB130BP0DP73 79 aa11.67□□□□□ -0.54
NEK9-211ENST00000557673 DEFB130AP0DP74 79 aa11.67□□□□□ -0.54
NEK9-211ENST00000557673 ZNF415Q09FC8 603 aa11.67□□□□□ -0.54
NEK9-211ENST00000557673 CENPWQ5EE01 88 aa11.67□□□□□ -0.54
NEK9-211ENST00000557673 TMEM88Q6PEY1 159 aa11.67□□□□□ -0.54
NEK9-211ENST00000557673 SDF2L1Q9HCN8 221 aa11.67□□□□□ -0.54
NEK9-211ENST00000557673 NOP10Q9NPE3 64 aaKnown RBP11.67□□□□□ -0.54
NEK9-211ENST00000557673 TRBV20OR9-2A0A075B6H5 130 aa11.66□□□□□ -0.54
NEK9-211ENST00000557673 TMEM250H0YL14 139 aa11.66□□□□□ -0.54
NEK9-211ENST00000557673 SH2D1AO60880 128 aa11.66□□□□□ -0.54
NEK9-211ENST00000557673 CDK2AP2O75956 126 aa11.66□□□□□ -0.54
NEK9-211ENST00000557673 TYMSP04818 313 aa11.66□□□□□ -0.54
NEK9-211ENST00000557673 CRIP1P50238 77 aa11.66□□□□□ -0.54
NEK9-211ENST00000557673 DAZ2Q13117 558 aaKnown RBP11.66□□□□□ -0.54
NEK9-211ENST00000557673 FAM162BQ5T6X4 162 aa11.66□□□□□ -0.54
NEK9-211ENST00000557673 BAGE2Q86Y30 109 aa11.66□□□□□ -0.54
NEK9-211ENST00000557673 LINC00612Q8N6U2 182 aa11.66□□□□□ -0.54
NEK9-211ENST00000557673 KCNS1Q96KK3 526 aa11.66□□□□□ -0.54
NEK9-211ENST00000557673 MED9Q9NWA0 146 aa11.66□□□□□ -0.54
NEK9-211ENST00000557673 C16orf90A8MZG2 172 aa11.65□□□□□ -0.54
NEK9-211ENST00000557673 NDUFS6O75380 124 aaKnown RBP11.65□□□□□ -0.54
NEK9-211ENST00000557673 ZNF674Q2M3X9 581 aa11.65□□□□□ -0.54
NEK9-211ENST00000557673 EIF5A2Q9GZV4 153 aaKnown RBP11.65□□□□□ -0.54
NEK9-211ENST00000557673 IGHV3-16A0A0C4DH30 117 aa11.64□□□□□ -0.55
NEK9-211ENST00000557673 FABP5P3A8MUU1 101 aa11.64□□□□□ -0.55
NEK9-211ENST00000557673 GNG4P50150 75 aa11.64□□□□□ -0.55
NEK9-211ENST00000557673 IFITM2Q01629 132 aa11.64□□□□□ -0.55
NEK9-211ENST00000557673 SMIM12Q96EX1 92 aa11.64□□□□□ -0.55
NEK9-211ENST00000557673 PARLQ9H300 379 aa11.64□□□□□ -0.55
NEK9-211ENST00000557673 MDFICQ9P1T7 246 aa11.64□□□□□ -0.55
NEK9-211ENST00000557673 RAB19A4D1S5 217 aa11.63□□□□□ -0.55
NEK9-211ENST00000557673 IGLV2-8P01709 118 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms