RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 COL1A1P02452 1464 aaPredicted RBP1.74□□□□□ -2.13
TRAV28-201ENST00000557548 ANKRD36BQ8N2N9 1353 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 CITO14578 2027 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 TRBV20-1A0A075B6N2 111 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 A0A0D9SG52 128 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 A0A0J9YW62 118 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 OR51F1A6NGY5 319 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 APOC4-APOC2K7ER74 178 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 M0R129 80 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 SDCBPO00560 298 aaPredicted RBP1.73□□□□□ -2.13
TRAV28-201ENST00000557548 GEMIN2O14893 280 aaKnown RBP1.73□□□□□ -2.13
TRAV28-201ENST00000557548 RTL8CO15255 209 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 CREBL2O60519 120 aaPredicted RBP1.73□□□□□ -2.13
TRAV28-201ENST00000557548 KLF7O75840 302 aaPredicted RBP1.73□□□□□ -2.13
TRAV28-201ENST00000557548 MPC2O95563 127 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 CPSF4O95639 269 aaKnown RBP1.73□□□□□ -2.13
TRAV28-201ENST00000557548 APOC2P02655 101 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 CD2P06729 351 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 TPT1P13693 172 aaKnown RBP1.73□□□□□ -2.13
TRAV28-201ENST00000557548 HRES1P13985 223 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 NFYAP23511 347 aaPredicted RBP1.73□□□□□ -2.13
TRAV28-201ENST00000557548 ZNF90Q03938 601 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 KLRD1Q13241 179 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 DEFB134Q4QY38 66 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 Q56UQ5 140 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 CLLU1Q5K131 121 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 PRR9Q5T870 116 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 C9orf153Q5TBE3 101 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 IGFL1Q6UW32 110 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 DPPA3Q6W0C5 159 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 SOSTDC1Q6X4U4 206 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 FOXI2Q6ZQN5 318 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 C10orf111Q8N326 155 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 PLPP5Q8NEB5 264 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 PFN4Q8NHR9 129 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 MUC7Q8TAX7 377 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 SMCR5Q8TEV8 140 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 LCN9Q8WX39 176 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 DIRC1Q969H9 104 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 OR8B2Q96RD0 313 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 SLC35B3Q9H1N7 401 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 SMDT1Q9H4I9 107 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 C16orf95Q9H693 158 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 AP4S1Q9Y587 144 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 CHCHD2Q9Y6H1 151 aaPredicted RBP1.73□□□□□ -2.13
TRAV28-201ENST00000557548 ARAP2Q8WZ64 1704 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 PDE4DIPQ5VU43 2346 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 RIC1Q4ADV7 1423 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 PARP14Q460N5 1801 aa1.73□□□□□ -2.13
TRAV28-201ENST00000557548 ANAPC1Q9H1A4 1944 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 POLEQ07864 2286 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 MRC1P22897 1456 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 IGHV3-73A0A0B4J1V6 119 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 C3orf85A0A1B0GTC6 90 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 LOC107986453A0A1B0GWG9 222 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 TCRBV3S1A0A5B6 114 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 C17orf98A8MV24 154 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 PRB2P02812 416 aaPredicted RBP1.72□□□□□ -2.13
TRAV28-201ENST00000557548 CTSDP07339 412 aaPredicted RBP1.72□□□□□ -2.13
TRAV28-201ENST00000557548 CCL5P13501 91 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 PCBD1P61457 104 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 UBA52P62987 128 aaKnown RBP1.72□□□□□ -2.13
TRAV28-201ENST00000557548 DYNLT1P63172 113 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 MRPS36P82909 103 aaKnown RBP1.72□□□□□ -2.13
TRAV28-201ENST00000557548 ZNF846Q147U1 533 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 KISS1Q15726 138 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 PYDC2Q56P42 97 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 Q6ZUT4 128 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 FAM216BQ8N7L0 139 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 FGF13Q92913 245 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 LINC00467Q9BRT7 94 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 SEC11CQ9BY50 192 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 NHP2Q9NX24 153 aaKnown RBP1.72□□□□□ -2.13
TRAV28-201ENST00000557548 FKBP11Q9NYL4 201 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 TAS2R4Q9NYW5 299 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 DNAJC15Q9Y5T4 150 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 PLXNB2O15031 1838 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 PTPRBP23467 1997 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 DUOX1Q9NRD9 1551 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 MYH8P13535 1937 aa1.72□□□□□ -2.13
TRAV28-201ENST00000557548 MDFIC2A0A1B0GVS7 189 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 H3BQF6 201 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 H3BT86 120 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 LYRM1O43325 122 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 TIMM17BO60830 172 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 HYPMO75409 117 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 LINC00032P0C843 101 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 ZNF705BP0CI00 300 aaPredicted RBP1.71□□□□□ -2.14
TRAV28-201ENST00000557548 SAA1P0DJI8 122 aaPredicted RBP1.71□□□□□ -2.14
TRAV28-201ENST00000557548 COX6A1P12074 109 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 FABP4P15090 132 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 CD24P25063 80 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 FUSP35637 526 aaKnown RBP eCLIP1.71□□□□□ -2.14
TRAV28-201ENST00000557548 XCL1P47992 114 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 ZNF117Q03924 483 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 CDK5R1Q15078 307 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 C6orf52Q5T4I8 152 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 PATE2Q6UY27 113 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 C2orf91Q6ZV80 131 aa1.71□□□□□ -2.14
TRAV28-201ENST00000557548 OR5AS1Q8N127 324 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms