RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 POLR2GP62487 172 aaKnown RBP eCLIP2.93□□□□□ -1.94
SCFD1-223ENST00000557076 MXD1Q05195 221 aa2.93□□□□□ -1.94
SCFD1-223ENST00000557076 BTN1A1Q13410 526 aa2.93□□□□□ -1.94
SCFD1-223ENST00000557076 SMCO1Q147U7 214 aa2.93□□□□□ -1.94
SCFD1-223ENST00000557076 GUK1Q16774 197 aa2.93□□□□□ -1.94
SCFD1-223ENST00000557076 LBHQ53QV2 105 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-223ENST00000557076 CYP2G1PQ6ZSU1 146 aa2.93□□□□□ -1.94
SCFD1-223ENST00000557076 BPIFA4PQ86YQ2 179 aa2.93□□□□□ -1.94
SCFD1-223ENST00000557076 CROCCP3Q8IVE0 287 aa2.93□□□□□ -1.94
SCFD1-223ENST00000557076 SLC25A29Q8N8R3 303 aa2.93□□□□□ -1.94
SCFD1-223ENST00000557076 OR4D10Q8NGI6 311 aa2.93□□□□□ -1.94
SCFD1-223ENST00000557076 OR10G9Q8NGN4 311 aa2.93□□□□□ -1.94
SCFD1-223ENST00000557076 MRPL53Q96EL3 112 aaKnown RBP2.93□□□□□ -1.94
SCFD1-223ENST00000557076 PRADC1Q9BSG0 188 aa2.93□□□□□ -1.94
SCFD1-223ENST00000557076 RTBDNQ9BSG5 229 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-223ENST00000557076 AGPAT4-IT1Q9H0P7 198 aa2.93□□□□□ -1.94
SCFD1-223ENST00000557076 VAX2Q9UIW0 290 aa2.93□□□□□ -1.94
SCFD1-223ENST00000557076 A0A087WWC5 75 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 A0A0B4J2A0 478 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 TRBV7-9A0A0J9YWB2 115 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 TRBV6-4A0A1B0GX49 114 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 A4D1N5 150 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 ANKRD65E5RJM6 399 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 H3BQ15 152 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 M0R2P5 195 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 PHOX2AO14813 284 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 ZNF253O75346 499 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 PRSS1P07477 247 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 OR10J4P0C629 311 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 OR4E1P0C645 316 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 LINC00869P0C866 280 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 IGLC2P0DOY2 106 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 AKR1C4P17516 323 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 TBPP20226 339 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 RPL19P84098 196 aaKnown RBP2.92□□□□□ -1.94
SCFD1-223ENST00000557076 Q0VG73 95 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 ERCC8Q13216 396 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 ELOBQ15370 118 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 UBE2NLQ5JXB2 153 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 Q6ZQT7 251 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 ZFAND2AQ8N6M9 145 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 OR51S1Q8NGJ8 323 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 OR13C8Q8NGS7 320 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 C7orf33Q8WU49 177 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 ARL6Q9H0F7 186 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 NAA60Q9H7X0 242 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 PLAC8Q9NZF1 115 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 SHPKQ9UHJ6 478 aa2.92□□□□□ -1.94
SCFD1-223ENST00000557076 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
SCFD1-223ENST00000557076 IGHV3-16A0A0C4DH30 117 aa2.91□□□□□ -1.94
SCFD1-223ENST00000557076 SMIM31A0A1B0GVY4 71 aa2.91□□□□□ -1.94
SCFD1-223ENST00000557076 K7EPK0 472 aa2.91□□□□□ -1.94
SCFD1-223ENST00000557076 SLC17A3O00476 420 aa2.91□□□□□ -1.94
SCFD1-223ENST00000557076 TSC22D2O75157 780 aa2.91□□□□□ -1.94
SCFD1-223ENST00000557076 TNFAIP8O95379 198 aa2.91□□□□□ -1.94
SCFD1-223ENST00000557076 SNRPCP09234 159 aaKnown RBP2.91□□□□□ -1.94
SCFD1-223ENST00000557076 PRR3P79522 188 aaKnown RBP2.91□□□□□ -1.94
SCFD1-223ENST00000557076 RPL24P83731 157 aaKnown RBP2.91□□□□□ -1.94
SCFD1-223ENST00000557076 RAB31Q13636 194 aa2.91□□□□□ -1.94
SCFD1-223ENST00000557076 SURF2Q15527 256 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-223ENST00000557076 RHOHQ15669 191 aa2.91□□□□□ -1.94
SCFD1-223ENST00000557076 RNASE10Q5GAN6 216 aaKnown RBP2.91□□□□□ -1.94
SCFD1-223ENST00000557076 LINC00305Q7Z4B0 112 aa2.91□□□□□ -1.94
SCFD1-223ENST00000557076 NIT1Q86X76 327 aa2.91□□□□□ -1.94
SCFD1-223ENST00000557076 OCC1Q8TAD7 63 aa2.91□□□□□ -1.94
SCFD1-223ENST00000557076 MARCH1Q8TCQ1 289 aa2.91□□□□□ -1.94
SCFD1-223ENST00000557076 DNAJC30Q96LL9 226 aa2.91□□□□□ -1.94
SCFD1-223ENST00000557076 CIB3Q96Q77 187 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-223ENST00000557076 ARV1Q9H2C2 271 aa2.91□□□□□ -1.94
SCFD1-223ENST00000557076 OR51M1Q9H341 326 aa2.91□□□□□ -1.94
SCFD1-223ENST00000557076 KLK12Q9UKR0 248 aa2.91□□□□□ -1.94
SCFD1-223ENST00000557076 PRELID1Q9Y255 219 aa2.91□□□□□ -1.94
SCFD1-223ENST00000557076 KCNIP3Q9Y2W7 256 aa2.91□□□□□ -1.94
SCFD1-223ENST00000557076 KIF25-AS1Q9Y6Z4 181 aa2.91□□□□□ -1.94
SCFD1-223ENST00000557076 PIGBOS1A0A0B4J2F0 54 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 FAM231BA6NCW3 169 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 FBLL1A6NHQ2 334 aaKnown RBP2.9□□□□□ -1.95
SCFD1-223ENST00000557076 H3BTX0 84 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 WRBO00258 174 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 CCSO14618 274 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 MED6O75586 246 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 CD3DP04234 171 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 UBE2MP61081 183 aaKnown RBP2.9□□□□□ -1.95
SCFD1-223ENST00000557076 CNBPP62633 177 aaKnown RBP2.9□□□□□ -1.95
SCFD1-223ENST00000557076 AKR1C1Q04828 323 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 LYZL2Q7Z4W2 148 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 ZNF546Q86UE3 836 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 SAMD12Q8N8I0 201 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 CYB561D1Q8N8Q1 229 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 OR11H4Q8NGC9 324 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 UBE2WQ96B02 151 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 YIPF6Q96EC8 236 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 CHCHD7Q9BUK0 85 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 SRRQ9GZT4 340 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 VCXQ9H320 206 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 ZNF492Q9P255 531 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 MTFP1Q9UDX5 166 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 PSORS1C2Q9UIG4 136 aa2.9□□□□□ -1.95
SCFD1-223ENST00000557076 PAIP2BQ9ULR5 123 aaKnown RBP2.9□□□□□ -1.95
SCFD1-223ENST00000557076 GPR132Q9UNW8 380 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms