RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 DUX3Q96PT4 197 aa11.79□□□□□ -0.52
TMEM55B-207ENST00000557041 HECTD1Q9ULT8 2610 aa11.78□□□□□ -0.52
TMEM55B-207ENST00000557041 TRAV12-2A0A075B6T6 113 aa11.78□□□□□ -0.52
TMEM55B-207ENST00000557041 SYNJ2BPP57105 145 aa11.78□□□□□ -0.52
TMEM55B-207ENST00000557041 EBI3Q14213 229 aa11.78□□□□□ -0.52
TMEM55B-207ENST00000557041 ZNF747Q9BV97 191 aa11.78□□□□□ -0.52
TMEM55B-207ENST00000557041 TTTY13Q9BZ97 58 aa11.78□□□□□ -0.52
TMEM55B-207ENST00000557041 ZFAND3Q9H8U3 227 aa11.78□□□□□ -0.52
TMEM55B-207ENST00000557041 DLEU1O43261 78 aa11.78□□□□□ -0.52
TMEM55B-207ENST00000557041 DKK2Q9UBU2 259 aa11.78□□□□□ -0.52
TMEM55B-207ENST00000557041 CSMD2Q7Z408 3487 aa11.78□□□□□ -0.52
TMEM55B-207ENST00000557041 GNRH2O43555 120 aa11.77□□□□□ -0.52
TMEM55B-207ENST00000557041 EDN2P20800 178 aa11.77□□□□□ -0.52
TMEM55B-207ENST00000557041 A0A0G2JLM5 398 aa11.77□□□□□ -0.53
TMEM55B-207ENST00000557041 CD7P09564 240 aa11.77□□□□□ -0.53
TMEM55B-207ENST00000557041 FAM159AQ6UWV7 190 aa11.77□□□□□ -0.53
TMEM55B-207ENST00000557041 GCSHP23434 173 aa11.77□□□□□ -0.53
TMEM55B-207ENST00000557041 GTSCR1Q86UQ5 136 aa11.76□□□□□ -0.53
TMEM55B-207ENST00000557041 A0A087WWL8 130 aa11.76□□□□□ -0.53
TMEM55B-207ENST00000557041 ASIPP42127 132 aa11.76□□□□□ -0.53
TMEM55B-207ENST00000557041 DPF1Q92782 380 aa11.76□□□□□ -0.53
TMEM55B-207ENST00000557041 AJUBAQ96IF1 538 aa11.76□□□□□ -0.53
TMEM55B-207ENST00000557041 IGKV3D-20A0A0C4DH25 116 aa11.76□□□□□ -0.53
TMEM55B-207ENST00000557041 A0A1W2PRX2 142 aa11.76□□□□□ -0.53
TMEM55B-207ENST00000557041 PAX2Q02962 417 aa11.76□□□□□ -0.53
TMEM55B-207ENST00000557041 ZNF124Q15973 351 aa11.76□□□□□ -0.53
TMEM55B-207ENST00000557041 C11orf21Q9P2W6 132 aa11.76□□□□□ -0.53
TMEM55B-207ENST00000557041 EMP1P54849 157 aa11.75□□□□□ -0.53
TMEM55B-207ENST00000557041 DEFB136Q30KP8 78 aa11.75□□□□□ -0.53
TMEM55B-207ENST00000557041 ST20Q9HBF5 79 aa11.75□□□□□ -0.53
TMEM55B-207ENST00000557041 FLNAP21333 2647 aaKnown RBP11.75□□□□□ -0.53
TMEM55B-207ENST00000557041 CTRLP40313 264 aa11.75□□□□□ -0.53
TMEM55B-207ENST00000557041 ANXA2RQ3ZCQ2 193 aa11.75□□□□□ -0.53
TMEM55B-207ENST00000557041 NF1P21359 2839 aa11.75□□□□□ -0.53
TMEM55B-207ENST00000557041 CLPSL1A2RUU4 121 aa11.74□□□□□ -0.53
TMEM55B-207ENST00000557041 IGHV3OR16-12A0A075B7B8 117 aa11.74□□□□□ -0.53
TMEM55B-207ENST00000557041 FAM223BA6NKX1 122 aa11.74□□□□□ -0.53
TMEM55B-207ENST00000557041 ANKRD39Q53RE8 183 aa11.74□□□□□ -0.53
TMEM55B-207ENST00000557041 FAM223AQ8IWN6 122 aa11.74□□□□□ -0.53
TMEM55B-207ENST00000557041 C9orf139Q6ZV77 190 aa11.74□□□□□ -0.53
TMEM55B-207ENST00000557041 C20orf173Q96LM9 149 aa11.74□□□□□ -0.53
TMEM55B-207ENST00000557041 LINC00477Q96M19 166 aa11.74□□□□□ -0.53
TMEM55B-207ENST00000557041 TRAV21A0A0B4J279 112 aa11.73□□□□□ -0.53
TMEM55B-207ENST00000557041 IGHG4P01861 327 aa11.73□□□□□ -0.53
TMEM55B-207ENST00000557041 C12orf54Q6X4T0 127 aa11.73□□□□□ -0.53
TMEM55B-207ENST00000557041 OR2K2Q8NGT1 345 aa11.73□□□□□ -0.53
TMEM55B-207ENST00000557041 DAZ1Q9NQZ3 744 aaKnown RBP11.73□□□□□ -0.53
TMEM55B-207ENST00000557041 ZNF256Q9Y2P7 627 aaPredicted RBP11.73□□□□□ -0.53
TMEM55B-207ENST00000557041 ID1P41134 155 aa11.73□□□□□ -0.53
TMEM55B-207ENST00000557041 PEF1Q9UBV8 284 aaKnown RBP11.73□□□□□ -0.53
TMEM55B-207ENST00000557041 K7EMI3 77 aa11.73□□□□□ -0.53
TMEM55B-207ENST00000557041 C21orf62-AS1Q17RA5 79 aa11.73□□□□□ -0.53
TMEM55B-207ENST00000557041 VPS13CQ709C8 3753 aa11.72□□□□□ -0.53
TMEM55B-207ENST00000557041 IGHV3-73A0A0B4J1V6 119 aa11.72□□□□□ -0.53
TMEM55B-207ENST00000557041 PCP2Q8IVA1 136 aa11.72□□□□□ -0.53
TMEM55B-207ENST00000557041 TRAV8-2A0A0B4J237 113 aa11.72□□□□□ -0.53
TMEM55B-207ENST00000557041 ZNF48Q96MX3 618 aaPredicted RBP11.72□□□□□ -0.53
TMEM55B-207ENST00000557041 KLK9Q9UKQ9 250 aa11.72□□□□□ -0.53
TMEM55B-207ENST00000557041 ITPR3Q14573 2671 aa11.72□□□□□ -0.53
TMEM55B-207ENST00000557041 SPINK13Q1W4C9 94 aa11.71□□□□□ -0.53
TMEM55B-207ENST00000557041 ZNF56Q15929 161 aa11.71□□□□□ -0.54
TMEM55B-207ENST00000557041 HIST2H2BCQ6DN03 193 aa11.71□□□□□ -0.54
TMEM55B-207ENST00000557041 PRR9Q5T870 116 aa11.7□□□□□ -0.54
TMEM55B-207ENST00000557041 ZC2HC1BQ5TFG8 222 aa11.7□□□□□ -0.54
TMEM55B-207ENST00000557041 PIFOQ8TCI5 191 aa11.7□□□□□ -0.54
TMEM55B-207ENST00000557041 USMG5Q96IX5 58 aa11.7□□□□□ -0.54
TMEM55B-207ENST00000557041 SCGB3A1Q96QR1 104 aa11.7□□□□□ -0.54
TMEM55B-207ENST00000557041 NXT2Q9NPJ8 142 aaKnown RBP11.7□□□□□ -0.54
TMEM55B-207ENST00000557041 FBN2P35556 2912 aa11.7□□□□□ -0.54
TMEM55B-207ENST00000557041 PPBPP02775 128 aa11.7□□□□□ -0.54
TMEM55B-207ENST00000557041 AMMECR1LQ6DCA0 310 aa11.7□□□□□ -0.54
TMEM55B-207ENST00000557041 NDUFA4O00483 81 aa11.7□□□□□ -0.54
TMEM55B-207ENST00000557041 RPL39LQ96EH5 51 aaKnown RBP11.7□□□□□ -0.54
TMEM55B-207ENST00000557041 C16orf54Q6UWD8 224 aa11.69□□□□□ -0.54
TMEM55B-207ENST00000557041 JPT2Q9H910 190 aa11.69□□□□□ -0.54
TMEM55B-207ENST00000557041 NDUFS8O00217 210 aa11.69□□□□□ -0.54
TMEM55B-207ENST00000557041 SNRPD3P62318 126 aaKnown RBP11.69□□□□□ -0.54
TMEM55B-207ENST00000557041 MRPS16Q9Y3D3 137 aaKnown RBP11.69□□□□□ -0.54
TMEM55B-207ENST00000557041 CHD6Q8TD26 2715 aa11.69□□□□□ -0.54
TMEM55B-207ENST00000557041 HELZ2Q9BYK8 2649 aaKnown RBP11.68□□□□□ -0.54
TMEM55B-207ENST00000557041 SFTA2Q6UW10 78 aa11.68□□□□□ -0.54
TMEM55B-207ENST00000557041 LINC01356Q8N9X3 169 aa11.68□□□□□ -0.54
TMEM55B-207ENST00000557041 OVOL1O14753 267 aa11.68□□□□□ -0.54
TMEM55B-207ENST00000557041 HOXA3O43365 443 aaPredicted RBP11.68□□□□□ -0.54
TMEM55B-207ENST00000557041 IGHG2P01859 326 aa11.68□□□□□ -0.54
TMEM55B-207ENST00000557041 H3BUT2 72 aa11.68□□□□□ -0.54
TMEM55B-207ENST00000557041 TMEM97Q5BJF2 176 aa11.68□□□□□ -0.54
TMEM55B-207ENST00000557041 TMEM8BA6NDV4 472 aa11.67□□□□□ -0.54
TMEM55B-207ENST00000557041 IGLC6P0CF74 106 aa11.67□□□□□ -0.54
TMEM55B-207ENST00000557041 SCGB1D4Q6XE38 83 aa11.67□□□□□ -0.54
TMEM55B-207ENST00000557041 IGHV7-4-1A0A0J9YVY3 117 aa11.67□□□□□ -0.54
TMEM55B-207ENST00000557041 LAGE3Q14657 143 aa11.67□□□□□ -0.54
TMEM55B-207ENST00000557041 DYNLRB2Q8TF09 96 aa11.67□□□□□ -0.54
TMEM55B-207ENST00000557041 JMJD8Q96S16 334 aa11.67□□□□□ -0.54
TMEM55B-207ENST00000557041 FLNBO75369 2602 aaKnown RBP11.67□□□□□ -0.54
TMEM55B-207ENST00000557041 TRBV6-1A0A0K0K1D8 114 aa11.66□□□□□ -0.54
TMEM55B-207ENST00000557041 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.66□□□□□ -0.54
TMEM55B-207ENST00000557041 KRTAP10-9P60411 292 aa11.66□□□□□ -0.54
TMEM55B-207ENST00000557041 LINC01545Q5VT33 79 aa11.66□□□□□ -0.54
TMEM55B-207ENST00000557041 MRPL35Q9NZE8 188 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms