RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 GAGE5Q13069 117 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 GAGE6Q13070 117 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 ZFP2Q6ZN57 461 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 DAND5Q8N907 189 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 OPRPNQ99935 248 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-223ENST00000557005 ADAMTS20P59510 1910 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 GRNP28799 593 aaKnown RBP3.85□□□□□ -1.79
SYNE2-223ENST00000557005 MYCNOSP40205 109 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 ZNF415Q09FC8 603 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 CR1LQ2VPA4 569 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 CFAP161Q6P656 301 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 NFE4Q86UQ8 179 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 CITED1Q99966 193 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 LY6G5BQ8NDX9 201 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 ATP6V0E2Q8NHE4 81 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 GAS8-AS1O95177 125 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 IGKV1-17P01599 117 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 SYNJ2BPP57105 145 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 MORN3Q6PF18 240 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-223ENST00000557005 Q6ZUT4 128 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 UBE2E2Q96LR5 201 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 BPESC1Q9GZL8 116 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 DKK4Q9UBT3 224 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 CEP192Q8TEP8 1941 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 C11orf44Q8N8P7 122 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 DAZ1Q9NQZ3 744 aaKnown RBP3.85□□□□□ -1.79
SYNE2-223ENST00000557005 SMAD5-AS1Q9Y6J3 95 aa3.85□□□□□ -1.79
SYNE2-223ENST00000557005 VWC2LB2RUY7 222 aa3.84□□□□□ -1.79
SYNE2-223ENST00000557005 RPL35AP18077 110 aaKnown RBP3.84□□□□□ -1.79
SYNE2-223ENST00000557005 SRSF2Q01130 221 aaKnown RBP3.84□□□□□ -1.79
SYNE2-223ENST00000557005 Q6ZS92 163 aa3.84□□□□□ -1.79
SYNE2-223ENST00000557005 NDUFA11Q86Y39 141 aa3.84□□□□□ -1.79
SYNE2-223ENST00000557005 C20orf173Q96LM9 149 aa3.84□□□□□ -1.79
SYNE2-223ENST00000557005 MLST8Q9BVC4 326 aa3.84□□□□□ -1.79
SYNE2-223ENST00000557005 NDUFA12Q9UI09 145 aa3.84□□□□□ -1.79
SYNE2-223ENST00000557005 EXPH5Q8NEV8 1989 aa3.84□□□□□ -1.79
SYNE2-223ENST00000557005 IGHV1OR15-1A0A075B7D0 117 aa3.84□□□□□ -1.79
SYNE2-223ENST00000557005 OOSP1A8MZH6 123 aa3.84□□□□□ -1.79
SYNE2-223ENST00000557005 INS-IGF2F8WCM5 200 aa3.84□□□□□ -1.79
SYNE2-223ENST00000557005 TRACP01848 142 aa3.84□□□□□ -1.79
SYNE2-223ENST00000557005 CTSGP08311 255 aa3.84□□□□□ -1.79
SYNE2-223ENST00000557005 UBE2E1P51965 193 aa3.84□□□□□ -1.79
SYNE2-223ENST00000557005 LY6DQ14210 128 aa3.84□□□□□ -1.79
SYNE2-223ENST00000557005 IGHV7-4-1A0A0J9YVY3 117 aa3.84□□□□□ -1.79
SYNE2-223ENST00000557005 USMG5Q96IX5 58 aa3.84□□□□□ -1.79
SYNE2-223ENST00000557005 A4D1N5 150 aa3.84□□□□□ -1.8
SYNE2-223ENST00000557005 COX6B1P14854 86 aa3.84□□□□□ -1.8
SYNE2-223ENST00000557005 IGHV7-81A0A0B4J1V7 117 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 C11orf86A6NJI1 115 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 E9PLD3 99 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 NDUFA4O00483 81 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 PAX4O43316 350 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 INSL3P51460 131 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 TCTEX1D4Q5JR98 221 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 SMIM20Q8N5G0 67 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 CLUHP3Q96NS8 147 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 YLPM1P49750 1951 aaKnown RBP3.83□□□□□ -1.8
SYNE2-223ENST00000557005 TRGV4A0A0C4DH28 118 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 GAGE12JA6NER3 117 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 GAGE7O76087 117 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 GAGE12FP0CL80 117 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 GAGE12GP0CL81 117 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 GAGE12IP0CL82 117 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 GAGE4Q13068 117 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 NSUN5P1Q3KNT7 163 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 ARHGAP21Q5T5U3 1957 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 IGHG4P01861 327 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 PRIMA1Q86XR5 153 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 JPT2Q9H910 190 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 TRBV12-3P01733 135 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 IGF1P05019 195 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 CRYGBP07316 175 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 PLA2G2CQ5R387 149 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 PIP4P2Q8N4L2 257 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 NEXN-AS1Q8NBZ9 246 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 KAAG1Q9UBP8 84 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 EML5Q05BV3 1969 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 PCNX3Q9H6A9 2034 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 PRRC2BQ5JSZ5 2229 aaKnown RBP3.83□□□□□ -1.8
SYNE2-223ENST00000557005 TINCRA0A1B0GVN0 87 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 INSP01308 110 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 CRYGCP07315 174 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 TEN1Q86WV5 123 aa3.83□□□□□ -1.8
SYNE2-223ENST00000557005 MRPL53Q96EL3 112 aaKnown RBP3.83□□□□□ -1.8
SYNE2-223ENST00000557005 EML6Q6ZMW3 1958 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 DEFB131AP59861 70 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 UFSP1Q6NVU6 142 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 C16orf54Q6UWD8 224 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 C9orf47Q6ZRZ4 202 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 SPATA25Q9BR10 227 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 IGHV1-69DA0A0B4J2H0 117 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 IGHV1-69P01742 117 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 IGLC6P0CF74 106 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 GNLYP22749 145 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 C22orf34Q6ZV56 151 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 TMEM126AQ9H061 195 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 TEX49A0A1B0GTD5 131 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 Q6ZQT7 251 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 FER1L5A0AVI2 2057 aa3.82□□□□□ -1.8
SYNE2-223ENST00000557005 CACNA1IQ9P0X4 2223 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms