RNA–Protein interactions for RNA: ENST00000556725.1

SYNE2-222, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 672 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-222ENST00000556725 CST7O76096 145 aa5.62□□□□□ -1.51
SYNE2-222ENST00000556725 MBPP02686 304 aaPredicted RBP5.62□□□□□ -1.51
SYNE2-222ENST00000556725 PFN1P07737 140 aaKnown RBP5.62□□□□□ -1.51
SYNE2-222ENST00000556725 RPL29P47914 159 aaKnown RBP5.62□□□□□ -1.51
SYNE2-222ENST00000556725 RAB31Q13636 194 aa5.62□□□□□ -1.51
SYNE2-222ENST00000556725 PDE6HQ13956 83 aa5.62□□□□□ -1.51
SYNE2-222ENST00000556725 ZNF266Q14584 549 aa5.62□□□□□ -1.51
SYNE2-222ENST00000556725 IAH1Q2TAA2 248 aaPredicted RBP5.62□□□□□ -1.51
SYNE2-222ENST00000556725 TDRG1Q3Y452 100 aa5.62□□□□□ -1.51
SYNE2-222ENST00000556725 GCSAMLQ5JQS6 135 aa5.62□□□□□ -1.51
SYNE2-222ENST00000556725 FAM159AQ6UWV7 190 aa5.62□□□□□ -1.51
SYNE2-222ENST00000556725 C12orf45Q8N5I9 185 aaPredicted RBP5.62□□□□□ -1.51
SYNE2-222ENST00000556725 PFDN5Q99471 154 aa5.62□□□□□ -1.51
SYNE2-222ENST00000556725 SLC25A2Q9BXI2 301 aa5.62□□□□□ -1.51
SYNE2-222ENST00000556725 AAMDCQ9H7C9 122 aa5.62□□□□□ -1.51
SYNE2-222ENST00000556725 WDR83OSQ9Y284 106 aa5.62□□□□□ -1.51
SYNE2-222ENST00000556725 TRGV11A0A075B6L2 103 aa5.61□□□□□ -1.51
SYNE2-222ENST00000556725 IGHV3-73A0A0B4J1V6 119 aa5.61□□□□□ -1.51
SYNE2-222ENST00000556725 FAM24AA6NFZ4 105 aa5.61□□□□□ -1.51
SYNE2-222ENST00000556725 NBEAP1P0C6P0 100 aa5.61□□□□□ -1.51
SYNE2-222ENST00000556725 ASIPP42127 132 aa5.61□□□□□ -1.51
SYNE2-222ENST00000556725 AP3S2P59780 193 aa5.61□□□□□ -1.51
SYNE2-222ENST00000556725 ASAH1Q13510 395 aa5.61□□□□□ -1.51
SYNE2-222ENST00000556725 BAK1Q16611 211 aa5.61□□□□□ -1.51
SYNE2-222ENST00000556725 PYDC2Q56P42 97 aa5.61□□□□□ -1.51
SYNE2-222ENST00000556725 Q6AWC8 147 aa5.61□□□□□ -1.51
SYNE2-222ENST00000556725 DPPA3Q6W0C5 159 aa5.61□□□□□ -1.51
SYNE2-222ENST00000556725 FAM167A-AS1Q96KT0 104 aa5.61□□□□□ -1.51
SYNE2-222ENST00000556725 SLIRPQ9GZT3 109 aaKnown RBP5.61□□□□□ -1.51
SYNE2-222ENST00000556725 GTSF1LQ9H1H1 148 aa5.61□□□□□ -1.51
SYNE2-222ENST00000556725 GPN1Q9HCN4 374 aaPredicted RBP5.61□□□□□ -1.51
SYNE2-222ENST00000556725 BATF3Q9NR55 127 aa5.61□□□□□ -1.51
SYNE2-222ENST00000556725 NAGKQ9UJ70 344 aa5.61□□□□□ -1.51
SYNE2-222ENST00000556725 TRAV8-3A0A0A6YYJ7 113 aa5.6□□□□□ -1.51
SYNE2-222ENST00000556725 TRBV7-9A0A0J9YWB2 115 aa5.6□□□□□ -1.51
SYNE2-222ENST00000556725 FBLL1A6NHQ2 334 aaKnown RBP5.6□□□□□ -1.51
SYNE2-222ENST00000556725 ACOT6Q3I5F7 207 aaPredicted RBP5.6□□□□□ -1.51
SYNE2-222ENST00000556725 MIR17HGQ75NE6 70 aa5.6□□□□□ -1.51
SYNE2-222ENST00000556725 Q8N976 141 aa5.6□□□□□ -1.51
SYNE2-222ENST00000556725 ATP6V0E2Q8NHE4 81 aa5.6□□□□□ -1.51
SYNE2-222ENST00000556725 PHYHIPLQ96FC7 376 aa5.6□□□□□ -1.51
SYNE2-222ENST00000556725 C11orf1Q9H5F2 150 aa5.6□□□□□ -1.51
SYNE2-222ENST00000556725 UQCC1Q9NVA1 299 aa5.6□□□□□ -1.51
SYNE2-222ENST00000556725 UBE2L5PA0A1B0GUS4 154 aa5.59□□□□□ -1.51
SYNE2-222ENST00000556725 L7N2F9 121 aa5.59□□□□□ -1.51
SYNE2-222ENST00000556725 CCSO14618 274 aa5.59□□□□□ -1.51
SYNE2-222ENST00000556725 IGLV2-11P01706 119 aa5.59□□□□□ -1.51
SYNE2-222ENST00000556725 TYMSP04818 313 aa5.59□□□□□ -1.51
SYNE2-222ENST00000556725 OR10J4P0C629 311 aa5.59□□□□□ -1.51
SYNE2-222ENST00000556725 BCAP31P51572 246 aa5.59□□□□□ -1.51
SYNE2-222ENST00000556725 CAV2P51636 162 aa5.59□□□□□ -1.51
SYNE2-222ENST00000556725 VAMP2P63027 116 aa5.59□□□□□ -1.51
SYNE2-222ENST00000556725 BAXQ07812 192 aa5.59□□□□□ -1.51
SYNE2-222ENST00000556725 ODF1Q14990 250 aa5.59□□□□□ -1.51
SYNE2-222ENST00000556725 VWC2Q2TAL6 325 aa5.59□□□□□ -1.51
SYNE2-222ENST00000556725 CFAP126Q5VTH2 177 aa5.59□□□□□ -1.51
SYNE2-222ENST00000556725 FXYD5Q96DB9 178 aa5.59□□□□□ -1.51
SYNE2-222ENST00000556725 PRADC1Q9BSG0 188 aa5.59□□□□□ -1.51
SYNE2-222ENST00000556725 C20orf85Q9H1P6 137 aa5.59□□□□□ -1.51
SYNE2-222ENST00000556725 Q9UF83 564 aa5.59□□□□□ -1.51
SYNE2-222ENST00000556725 LSM5Q9Y4Y9 91 aaKnown RBP5.59□□□□□ -1.51
SYNE2-222ENST00000556725 IGKV2D-24A0A075B6R9 120 aa5.58□□□□□ -1.52
SYNE2-222ENST00000556725 TRBV6-4A0A1B0GX49 114 aa5.58□□□□□ -1.52
SYNE2-222ENST00000556725 C5orf51A6NDU8 294 aa5.58□□□□□ -1.52
SYNE2-222ENST00000556725 GGTLC3B5MD39 225 aa5.58□□□□□ -1.52
SYNE2-222ENST00000556725 FGF7P21781 194 aa5.58□□□□□ -1.52
SYNE2-222ENST00000556725 RANP62826 216 aaKnown RBP5.58□□□□□ -1.52
SYNE2-222ENST00000556725 RHOHQ15669 191 aa5.58□□□□□ -1.52
SYNE2-222ENST00000556725 OR51M1Q9H341 326 aa5.58□□□□□ -1.52
SYNE2-222ENST00000556725 V9GYH0 126 aa5.58□□□□□ -1.52
SYNE2-222ENST00000556725 IGSF23A1L1A6 192 aa5.57□□□□□ -1.52
SYNE2-222ENST00000556725 RBAKDNA6NC62 111 aa5.57□□□□□ -1.52
SYNE2-222ENST00000556725 GAGE12JA6NER3 117 aa5.57□□□□□ -1.52
SYNE2-222ENST00000556725 NDUFB6O95139 128 aa5.57□□□□□ -1.52
SYNE2-222ENST00000556725 CSN1S1P47710 185 aa5.57□□□□□ -1.52
SYNE2-222ENST00000556725 GAGE1Q13065 139 aa5.57□□□□□ -1.52
SYNE2-222ENST00000556725 GAGE4Q13068 117 aa5.57□□□□□ -1.52
SYNE2-222ENST00000556725 GAGE5Q13069 117 aa5.57□□□□□ -1.52
SYNE2-222ENST00000556725 ZNF876PQ49A33 203 aa5.57□□□□□ -1.52
SYNE2-222ENST00000556725 GAGE13Q4V321 117 aa5.57□□□□□ -1.52
SYNE2-222ENST00000556725 TVP23CQ96ET8 276 aa5.57□□□□□ -1.52
SYNE2-222ENST00000556725 PAXXQ9BUH6 204 aa5.57□□□□□ -1.52
SYNE2-222ENST00000556725 LENEPQ9Y5L5 61 aa5.57□□□□□ -1.52
SYNE2-222ENST00000556725 COX11Q9Y6N1 276 aa5.57□□□□□ -1.52
SYNE2-222ENST00000556725 PGPEP1LA6NFU8 196 aa5.56□□□□□ -1.52
SYNE2-222ENST00000556725 DIRC3C9JPN6 131 aa5.56□□□□□ -1.52
SYNE2-222ENST00000556725 F6UZH7 168 aa5.56□□□□□ -1.52
SYNE2-222ENST00000556725 PANO1I0J062 215 aa5.56□□□□□ -1.52
SYNE2-222ENST00000556725 S100A11P31949 105 aa5.56□□□□□ -1.52
SYNE2-222ENST00000556725 TOR2AQ5JU69 321 aa5.56□□□□□ -1.52
SYNE2-222ENST00000556725 Q6ZRU5 148 aa5.56□□□□□ -1.52
SYNE2-222ENST00000556725 CLRN3Q8NCR9 226 aa5.56□□□□□ -1.52
SYNE2-222ENST00000556725 NUDT10Q8NFP7 164 aa5.56□□□□□ -1.52
SYNE2-222ENST00000556725 MITD1Q8WV92 249 aa5.56□□□□□ -1.52
SYNE2-222ENST00000556725 NUDT11Q96G61 164 aa5.56□□□□□ -1.52
SYNE2-222ENST00000556725 NPCDR1Q9BY65 106 aa5.56□□□□□ -1.52
SYNE2-222ENST00000556725 KLK12Q9UKR0 248 aa5.56□□□□□ -1.52
SYNE2-222ENST00000556725 RPH3ALQ9UNE2 315 aa5.56□□□□□ -1.52
SYNE2-222ENST00000556725 TRAV21A0A0B4J279 112 aa5.55□□□□□ -1.52
SYNE2-222ENST00000556725 FAM25EA8MYX2 175 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms