RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 IGHV3-7P01780 117 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 CPMP14384 443 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 RPS24P62847 133 aaKnown RBP2.49□□□□□ -2.01
PRPF39-210ENST00000556718 EDDM3AQ14507 147 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 KISS1Q15726 138 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 Q6ZUT4 128 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 C6orf201Q7Z4U5 140 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 LYPD6Q86Y78 171 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 FAM19A2Q8N3H0 131 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 RPP25LQ8N5L8 163 aaKnown RBP2.49□□□□□ -2.01
PRPF39-210ENST00000556718 H1FXQ92522 213 aaKnown RBP2.49□□□□□ -2.01
PRPF39-210ENST00000556718 MRPL32Q9BYC8 188 aaKnown RBP2.49□□□□□ -2.01
PRPF39-210ENST00000556718 TMEM133Q9H2Q1 129 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 TMEM167BQ9NRX6 74 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 PLXNA3P51805 1871 aa2.49□□□□□ -2.01
PRPF39-210ENST00000556718 DYSFO75923 2080 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 NUP205Q92621 2012 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 A0A087WX48 190 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 IGHV1-45A0A0A0MS14 117 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 IGHV1-24A0A0C4DH33 117 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 UBE2L5PA0A1B0GUS4 154 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 A0A1B0GX51 115 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 A0A1W2PRE2 83 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 C5orf49A4QMS7 147 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 A8MWV9 139 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 GGTLC3B5MD39 225 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 PPYP01298 95 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 SLC25A5P05141 298 aaKnown RBP2.48□□□□□ -2.01
PRPF39-210ENST00000556718 ATP5G1P05496 136 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 ORM2P19652 201 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 ATP5G3P48201 142 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 RPL18Q07020 188 aaKnown RBP2.48□□□□□ -2.01
PRPF39-210ENST00000556718 WFDC2Q14508 124 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 TBC1D28Q2M2D7 210 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 ETDBQ3ZM63 59 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 NMSQ5H8A3 153 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 SPANXN5Q5MJ07 72 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 IBA57Q5T440 356 aaKnown RBP2.48□□□□□ -2.01
PRPF39-210ENST00000556718 TMEM78Q5T7P6 136 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 LINC01545Q5VT33 79 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 SPATA31B1PQ5VZV4 182 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 Q6AWC8 147 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 EBLN2Q6P2I7 272 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 Q6ZS49 121 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 SSX8Q7RTT4 187 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 MARCH3Q86UD3 253 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 OOSP2Q86WS3 158 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 C2orf73Q8N5S3 287 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-210ENST00000556718 ZNF721Q8TF20 911 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 PRELID3AQ96N28 172 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 LINC00312Q9Y6C7 94 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 MYLKQ15746 1914 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 NINQ8N4C6 2090 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 ANK1P16157 1881 aa2.48□□□□□ -2.01
PRPF39-210ENST00000556718 IGHV3-43A0A0B4J1X8 118 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 TRAV5A0A0B4J249 113 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 SPAARA0A1B0GVQ0 90 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 C16orf90A8MZG2 172 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 PGLYRP1O75594 196 aaPredicted RBP2.47□□□□□ -2.01
PRPF39-210ENST00000556718 NAPSAO96009 420 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 IGHMP01871 453 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 CNTFRP26992 372 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 MP68P56378 58 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 RPL30P62888 115 aaKnown RBP2.47□□□□□ -2.01
PRPF39-210ENST00000556718 HBBP68871 147 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 PSG4Q00888 419 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 LY6EQ16553 131 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 LGALS9BQ3B8N2 356 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 LGALS9CQ6DKI2 356 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 RPRMLQ8N4K4 120 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 C10orf126Q8N4M7 172 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 NUP35Q8NFH5 326 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 OR4C13Q8NGP0 309 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 CT55Q8WUE5 264 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 SPTSSAQ969W0 71 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 VSIRQ9H7M9 311 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 HILPDAQ9Y5L2 63 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 V9GYV3 84 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 TRPM7Q96QT4 1865 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 ZNF106Q9H2Y7 1883 aaKnown RBP2.47□□□□□ -2.01
PRPF39-210ENST00000556718 CHD3Q12873 2000 aaKnown RBP2.47□□□□□ -2.01
PRPF39-210ENST00000556718 ARID1AO14497 2285 aa2.47□□□□□ -2.01
PRPF39-210ENST00000556718 C21orf140B9A014 251 aa2.46□□□□□ -2.02
PRPF39-210ENST00000556718 C9JAW5 83 aa2.46□□□□□ -2.02
PRPF39-210ENST00000556718 C8orf87E5RJ46 101 aa2.46□□□□□ -2.02
PRPF39-210ENST00000556718 F2Z2F3 143 aa2.46□□□□□ -2.02
PRPF39-210ENST00000556718 SPINK4O60575 86 aa2.46□□□□□ -2.02
PRPF39-210ENST00000556718 OR2H2O95918 312 aa2.46□□□□□ -2.02
PRPF39-210ENST00000556718 MT-ATP8P03928 68 aa2.46□□□□□ -2.02
PRPF39-210ENST00000556718 IAPPP10997 89 aa2.46□□□□□ -2.02
PRPF39-210ENST00000556718 HLA-DRB4P13762 266 aa2.46□□□□□ -2.02
PRPF39-210ENST00000556718 CCL1P22362 96 aa2.46□□□□□ -2.02
PRPF39-210ENST00000556718 NPPCP23582 126 aa2.46□□□□□ -2.02
PRPF39-210ENST00000556718 GCHFRP30047 84 aa2.46□□□□□ -2.02
PRPF39-210ENST00000556718 RRN3P1Q2M238 152 aa2.46□□□□□ -2.02
PRPF39-210ENST00000556718 CENPWQ5EE01 88 aa2.46□□□□□ -2.02
PRPF39-210ENST00000556718 C22orf39Q6P5X5 142 aa2.46□□□□□ -2.02
PRPF39-210ENST00000556718 IGFL1Q6UW32 110 aa2.46□□□□□ -2.02
PRPF39-210ENST00000556718 TMEM14EPQ6UXP3 125 aa2.46□□□□□ -2.02
PRPF39-210ENST00000556718 C2orf91Q6ZV80 131 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms