RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 PLEKHA3Q9HB20 300 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 TMSB15BA0A087X1C1 80 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 BUB3O43684 328 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 ARL14EPLP0DKL9 152 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 ASIPP42127 132 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 ATP5G3P48201 142 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 YPEL3P61236 119 aaPredicted RBP4□□□□□ -1.77
TMEM260-210ENST00000556422 WT1-ASQ06250 92 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 C2orf83Q53S99 150 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 C11orf71Q6IPW1 123 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 TEPPQ6URK8 271 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 PDPNQ86YL7 162 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 OR9G1Q8NH87 305 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 ATP6V0E2Q8NHE4 81 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 C10orf105Q8TEF2 133 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 TMEM133Q9H2Q1 129 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 TP73-AS1Q9UF72 201 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 NAV2Q8IVL1 2488 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 ABCA2Q9BZC7 2435 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 SPTAN1Q13813 2472 aaKnown RBP4□□□□□ -1.77
TMEM260-210ENST00000556422 INS-IGF2F8WCM5 200 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 SYS1-DBNDD2H3BUS1 97 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 HLA-DRB1P01911 266 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 RPL23P62829 140 aaKnown RBP3.99□□□□□ -1.77
TMEM260-210ENST00000556422 C15orf53Q8NAA6 179 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 OR2T6Q8NHC8 308 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 TMEM167AQ8TBQ9 72 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 USP9XQ93008 2570 aaPredicted RBP3.99□□□□□ -1.77
TMEM260-210ENST00000556422 TRBV20OR9-2A0A075B6H5 130 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 RBAKDNA6NC62 111 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 OXTP01178 125 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 APOC4P55056 127 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 TMEM258P61165 79 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 GNB1P62873 340 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 KLF5Q13887 457 aaPredicted RBP3.99□□□□□ -1.77
TMEM260-210ENST00000556422 RUSC1-AS1Q66K80 236 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 IGFBPL1Q8WX77 278 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 DPH3Q96FX2 82 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 MDFIC2A0A1B0GVS7 189 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 KNCNA6PVL3 124 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 SNURFLB1AK76 121 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 C11orf94C9JXX5 98 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 F6UB75 175 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 FOXA3P55318 350 aaPredicted RBP3.99□□□□□ -1.77
TMEM260-210ENST00000556422 LINC00482Q8N8I6 264 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 LY6G5BQ8NDX9 201 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 AJUBAQ96IF1 538 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 KRTAP3-3Q9BYR6 98 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 KRTAP3-2Q9BYR7 98 aa3.99□□□□□ -1.77
TMEM260-210ENST00000556422 IGHV3-72A0A0B4J1Y9 119 aa3.98□□□□□ -1.77
TMEM260-210ENST00000556422 TRAV2A0A0B4J234 112 aa3.98□□□□□ -1.77
TMEM260-210ENST00000556422 PYYP10082 97 aa3.98□□□□□ -1.77
TMEM260-210ENST00000556422 THAP8Q8NA92 274 aa3.98□□□□□ -1.77
TMEM260-210ENST00000556422 ZNF503Q96F45 646 aa3.98□□□□□ -1.77
TMEM260-210ENST00000556422 OTORQ9NRC9 128 aa3.98□□□□□ -1.77
TMEM260-210ENST00000556422 MRPL36Q9P0J6 103 aaKnown RBP3.98□□□□□ -1.77
TMEM260-210ENST00000556422 SCGB1C2P0DMR2 95 aa3.98□□□□□ -1.77
TMEM260-210ENST00000556422 DLX4Q92988 240 aaPredicted RBP3.98□□□□□ -1.77
TMEM260-210ENST00000556422 LY6LH3BQJ8 138 aa3.98□□□□□ -1.77
TMEM260-210ENST00000556422 BUB1B-PAK6H3BSN5 160 aa3.98□□□□□ -1.77
TMEM260-210ENST00000556422 CD7P09564 240 aa3.98□□□□□ -1.77
TMEM260-210ENST00000556422 Q8N976 141 aa3.98□□□□□ -1.77
TMEM260-210ENST00000556422 NHP2Q9NX24 153 aaKnown RBP3.98□□□□□ -1.77
TMEM260-210ENST00000556422 RABAC1Q9UI14 185 aa3.98□□□□□ -1.77
TMEM260-210ENST00000556422 ZNF462Q96JM2 2506 aa3.98□□□□□ -1.77
TMEM260-210ENST00000556422 IGKV1D-37A0A075B6S9 117 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 IGHV1-3A0A0C4DH29 117 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 APOHP02749 345 aaPredicted RBP3.97□□□□□ -1.77
TMEM260-210ENST00000556422 RBP4P02753 201 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 TCRAP04437 139 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 GCHFRP30047 84 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 NMUP48645 174 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 MFAP2P55001 183 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 MORN5Q5VZ52 161 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 PVRIGQ6DKI7 326 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 MIR17HGQ75NE6 70 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 LINC00526Q96FQ7 95 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 OR8B2Q96RD0 313 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 TRAV26-2A0A0B4J265 109 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 SCO2A0A1W2PP80 73 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 PRB1P04280 392 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 ECSCRQ19T08 205 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 ZC2HC1BQ5TFG8 222 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 Q5XG85 94 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 Q6ZQT7 251 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 GNB4Q9HAV0 340 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 A0A1W2PS18 150 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 hADV29S1A0JD25 119 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 IGHV3-48P01763 117 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 FCER1GP30273 86 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 RNF114Q9Y508 228 aa3.97□□□□□ -1.77
TMEM260-210ENST00000556422 TRAV8-4A0A0B4J246 113 aa3.96□□□□□ -1.77
TMEM260-210ENST00000556422 DAZ2Q13117 558 aaKnown RBP3.96□□□□□ -1.77
TMEM260-210ENST00000556422 HCP5Q6MZN7 132 aa3.96□□□□□ -1.77
TMEM260-210ENST00000556422 DAZ4Q86SG3 579 aaKnown RBP3.96□□□□□ -1.77
TMEM260-210ENST00000556422 PRIMA1Q86XR5 153 aa3.96□□□□□ -1.77
TMEM260-210ENST00000556422 SPANXDQ9BXN6 97 aa3.96□□□□□ -1.77
TMEM260-210ENST00000556422 NXT2Q9NPJ8 142 aaKnown RBP3.96□□□□□ -1.77
TMEM260-210ENST00000556422 DAZ1Q9NQZ3 744 aaKnown RBP3.96□□□□□ -1.77
TMEM260-210ENST00000556422 DAZ3Q9NR90 486 aaKnown RBP3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms