RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 SMIM15Q7Z3B0 74 aa0.13□□□□□ -2.39
SCFD1-218ENST00000556256 TMEM35BQ8NCS4 154 aa0.13□□□□□ -2.39
SCFD1-218ENST00000556256 OR4S1Q8NGB4 309 aa0.13□□□□□ -2.39
SCFD1-218ENST00000556256 CPDO75976 1380 aa0.13□□□□□ -2.39
SCFD1-218ENST00000556256 FER1L6Q2WGJ9 1857 aa0.13□□□□□ -2.39
SCFD1-218ENST00000556256 NAV2Q8IVL1 2488 aa0.13□□□□□ -2.39
SCFD1-218ENST00000556256 TNCP24821 2201 aa0.13□□□□□ -2.39
SCFD1-218ENST00000556256 ASH1LQ9NR48 2969 aaKnown RBP0.12□□□□□ -2.39
SCFD1-218ENST00000556256 ANK1P16157 1881 aa0.12□□□□□ -2.39
SCFD1-218ENST00000556256 LOC285556D6RIA3 1793 aa0.12□□□□□ -2.39
SCFD1-218ENST00000556256 KNTC1P50748 2209 aa0.12□□□□□ -2.39
SCFD1-218ENST00000556256 IGHV1-24A0A0C4DH33 117 aa0.12□□□□□ -2.39
SCFD1-218ENST00000556256 TCRAP04437 139 aa0.12□□□□□ -2.39
SCFD1-218ENST00000556256 NEFHP12036 1026 aa0.12□□□□□ -2.39
SCFD1-218ENST00000556256 S100GP29377 79 aa0.12□□□□□ -2.39
SCFD1-218ENST00000556256 TSKUQ8WUA8 353 aa0.12□□□□□ -2.39
SCFD1-218ENST00000556256 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.12□□□□□ -2.39
SCFD1-218ENST00000556256 ARHGAP31Q2M1Z3 1444 aa0.12□□□□□ -2.39
SCFD1-218ENST00000556256 FAT4Q6V0I7 4981 aa0.11□□□□□ -2.39
SCFD1-218ENST00000556256 ZCCHC6Q5VYS8 1495 aaKnown RBP0.11□□□□□ -2.39
SCFD1-218ENST00000556256 ARAP1Q96P48 1450 aa0.11□□□□□ -2.39
SCFD1-218ENST00000556256 A0A1B0GX51 115 aa0.11□□□□□ -2.39
SCFD1-218ENST00000556256 J3KT08 172 aa0.11□□□□□ -2.39
SCFD1-218ENST00000556256 IL7P13232 177 aa0.11□□□□□ -2.39
SCFD1-218ENST00000556256 ADCYAP1P18509 176 aa0.11□□□□□ -2.39
SCFD1-218ENST00000556256 KLKP1Q107X0 134 aa0.11□□□□□ -2.39
SCFD1-218ENST00000556256 SKA2Q8WVK7 121 aaPredicted RBP0.11□□□□□ -2.39
SCFD1-218ENST00000556256 ATG5Q9H1Y0 275 aa0.11□□□□□ -2.39
SCFD1-218ENST00000556256 METTL1Q9UBP6 276 aaKnown RBP0.11□□□□□ -2.39
SCFD1-218ENST00000556256 GINS2Q9Y248 185 aa0.11□□□□□ -2.39
SCFD1-218ENST00000556256 SYNE1Q8NF91 8797 aaKnown RBP0.11□□□□□ -2.39
SCFD1-218ENST00000556256 OVOS2A0A0G2JMS6 1433 aa0.11□□□□□ -2.39
SCFD1-218ENST00000556256 TRAV36DV7A0A075B6V5 113 aa0.1□□□□□ -2.39
SCFD1-218ENST00000556256 PNMA8CA0A1B0GUJ8 204 aa0.1□□□□□ -2.39
SCFD1-218ENST00000556256 CD3DP04234 171 aa0.1□□□□□ -2.39
SCFD1-218ENST00000556256 B2MP61769 119 aa0.1□□□□□ -2.39
SCFD1-218ENST00000556256 HSD17B12Q53GQ0 312 aa0.1□□□□□ -2.39
SCFD1-218ENST00000556256 SPINK6Q6UWN8 80 aa0.1□□□□□ -2.39
SCFD1-218ENST00000556256 SELENOSQ9BQE4 189 aa0.1□□□□□ -2.39
SCFD1-218ENST00000556256 BLMP54132 1417 aaPredicted RBP0.1□□□□□ -2.39
SCFD1-218ENST00000556256 CDK12Q9NYV4 1490 aaPredicted RBP0.1□□□□□ -2.39
SCFD1-218ENST00000556256 KIDINS220Q9ULH0 1771 aa0.09□□□□□ -2.39
SCFD1-218ENST00000556256 TRBV10-1A0A0K0K1A3 114 aa0.09□□□□□ -2.4
SCFD1-218ENST00000556256 CXorf51AA0A1B0GTR3 108 aa0.09□□□□□ -2.4
SCFD1-218ENST00000556256 TSTD3H0UI37 97 aa0.09□□□□□ -2.4
SCFD1-218ENST00000556256 H0YJX3 145 aa0.09□□□□□ -2.4
SCFD1-218ENST00000556256 FXYD1O00168 92 aa0.09□□□□□ -2.4
SCFD1-218ENST00000556256 DPM2O94777 84 aa0.09□□□□□ -2.4
SCFD1-218ENST00000556256 CCKP06307 115 aa0.09□□□□□ -2.4
SCFD1-218ENST00000556256 SCTP09683 121 aa0.09□□□□□ -2.4
SCFD1-218ENST00000556256 SDC4P31431 198 aa0.09□□□□□ -2.4
SCFD1-218ENST00000556256 PCBD1P61457 104 aa0.09□□□□□ -2.4
SCFD1-218ENST00000556256 PSPHP78330 225 aa0.09□□□□□ -2.4
SCFD1-218ENST00000556256 TMEM91Q6ZNR0 172 aa0.09□□□□□ -2.4
SCFD1-218ENST00000556256 TMEM14BQ9NUH8 114 aa0.09□□□□□ -2.4
SCFD1-218ENST00000556256 HSPB11Q9Y547 144 aa0.09□□□□□ -2.4
SCFD1-218ENST00000556256 DNAJC15Q9Y5T4 150 aa0.09□□□□□ -2.4
SCFD1-218ENST00000556256 BCORL1Q5H9F3 1711 aa0.08□□□□□ -2.4
SCFD1-218ENST00000556256 GNG14A0A1W2PPG7 69 aa0.08□□□□□ -2.4
SCFD1-218ENST00000556256 OR2H2O95918 312 aa0.08□□□□□ -2.4
SCFD1-218ENST00000556256 MT-ND4LP03901 98 aa0.08□□□□□ -2.4
SCFD1-218ENST00000556256 HIST1H1BP16401 226 aaKnown RBP0.08□□□□□ -2.4
SCFD1-218ENST00000556256 PLGLB1Q02325 96 aa0.08□□□□□ -2.4
SCFD1-218ENST00000556256 OR8B8Q15620 311 aa0.08□□□□□ -2.4
SCFD1-218ENST00000556256 IQCJQ1A5X6 159 aa0.08□□□□□ -2.4
SCFD1-218ENST00000556256 OR8I2Q8N0Y5 310 aa0.08□□□□□ -2.4
SCFD1-218ENST00000556256 LRP5O75197 1615 aa0.08□□□□□ -2.4
SCFD1-218ENST00000556256 TRPM7Q96QT4 1865 aa0.07□□□□□ -2.4
SCFD1-218ENST00000556256 MAST4O15021 2626 aa0.07□□□□□ -2.4
SCFD1-218ENST00000556256 A0A1B0GW64 132 aa0.07□□□□□ -2.4
SCFD1-218ENST00000556256 DEGS1O15121 323 aa0.07□□□□□ -2.4
SCFD1-218ENST00000556256 TNFSF15O95150 251 aa0.07□□□□□ -2.4
SCFD1-218ENST00000556256 PAEPP09466 180 aa0.07□□□□□ -2.4
SCFD1-218ENST00000556256 MPC1LP0DKB6 136 aa0.07□□□□□ -2.4
SCFD1-218ENST00000556256 POLR2JP52435 117 aaKnown RBP0.07□□□□□ -2.4
SCFD1-218ENST00000556256 TAC4Q86UU9 113 aa0.07□□□□□ -2.4
SCFD1-218ENST00000556256 PPDPFLQ8WWR9 84 aa0.07□□□□□ -2.4
SCFD1-218ENST00000556256 TEX49A0A1B0GTD5 131 aa0.06□□□□□ -2.4
SCFD1-218ENST00000556256 C9JAW5 83 aa0.06□□□□□ -2.4
SCFD1-218ENST00000556256 HLA-DRB4P13762 266 aa0.06□□□□□ -2.4
SCFD1-218ENST00000556256 TMEM244Q5VVB8 128 aa0.06□□□□□ -2.4
SCFD1-218ENST00000556256 UNQ5815/PRO19632Q6UWF5 114 aa0.06□□□□□ -2.4
SCFD1-218ENST00000556256 SLC25A26Q70HW3 274 aa0.06□□□□□ -2.4
SCFD1-218ENST00000556256 TAS2R8Q9NYW2 309 aa0.06□□□□□ -2.4
SCFD1-218ENST00000556256 HIGD1AQ9Y241 93 aa0.06□□□□□ -2.4
SCFD1-218ENST00000556256 HLA-DRB4X5D2U9 266 aa0.06□□□□□ -2.4
SCFD1-218ENST00000556256 ATG2AQ2TAZ0 1938 aa0.05□□□□□ -2.4
SCFD1-218ENST00000556256 DLEC1Q9Y238 1755 aa0.05□□□□□ -2.4
SCFD1-218ENST00000556256 TRAV2A0A0B4J234 112 aa0.05□□□□□ -2.4
SCFD1-218ENST00000556256 AKR1D1P51857 326 aa0.05□□□□□ -2.4
SCFD1-218ENST00000556256 EMX2Q04743 252 aa0.05□□□□□ -2.4
SCFD1-218ENST00000556256 SLC35B3Q9H1N7 401 aa0.05□□□□□ -2.4
SCFD1-218ENST00000556256 PROK2Q9HC23 129 aa0.05□□□□□ -2.4
SCFD1-218ENST00000556256 MEGF8Q7Z7M0 2845 aa0.05□□□□□ -2.4
SCFD1-218ENST00000556256 IGF2RP11717 2491 aa0.05□□□□□ -2.4
SCFD1-218ENST00000556256 TTC28Q96AY4 2481 aa0.05□□□□□ -2.4
SCFD1-218ENST00000556256 RREB1Q92766 1687 aa0.05□□□□□ -2.4
SCFD1-218ENST00000556256 UHRF1BP1LA0JNW5 1464 aa0.04□□□□□ -2.4
SCFD1-218ENST00000556256 NINQ8N4C6 2090 aa0.04□□□□□ -2.4
SCFD1-218ENST00000556256 XIRP1Q702N8 1843 aaKnown RBP0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms