RNA–Protein interactions for RNA: ENST00000555958.5

ATXN3-234, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-234ENST00000555958 ZNF90Q03938 601 aa2.31□□□□□ -2.04
ATXN3-234ENST00000555958 CATR1Q13166 79 aa2.31□□□□□ -2.04
ATXN3-234ENST00000555958 OR2F1Q13607 317 aa2.31□□□□□ -2.04
ATXN3-234ENST00000555958 DNAL1Q4LDG9 190 aa2.31□□□□□ -2.04
ATXN3-234ENST00000555958 PRR9Q5T870 116 aa2.31□□□□□ -2.04
ATXN3-234ENST00000555958 THOC7Q6I9Y2 204 aaKnown RBP2.31□□□□□ -2.04
ATXN3-234ENST00000555958 PRSS54Q6PEW0 395 aa2.31□□□□□ -2.04
ATXN3-234ENST00000555958 LYPD5Q6UWN5 251 aa2.31□□□□□ -2.04
ATXN3-234ENST00000555958 NEGR1Q7Z3B1 354 aa2.31□□□□□ -2.04
ATXN3-234ENST00000555958 TMEM144Q7Z5S9 345 aa2.31□□□□□ -2.04
ATXN3-234ENST00000555958 HSD17B11Q8NBQ5 300 aa2.31□□□□□ -2.04
ATXN3-234ENST00000555958 ZNF555Q8NEP9 628 aa2.31□□□□□ -2.04
ATXN3-234ENST00000555958 OR4X1Q8NH49 305 aa2.31□□□□□ -2.04
ATXN3-234ENST00000555958 Q8WTZ3 238 aa2.31□□□□□ -2.04
ATXN3-234ENST00000555958 ACY3Q96HD9 319 aa2.31□□□□□ -2.04
ATXN3-234ENST00000555958 BCL7BQ9BQE9 202 aa2.31□□□□□ -2.04
ATXN3-234ENST00000555958 ACTR3CQ9C0K3 210 aaPredicted RBP2.31□□□□□ -2.04
ATXN3-234ENST00000555958 FXYD6Q9H0Q3 95 aa2.31□□□□□ -2.04
ATXN3-234ENST00000555958 PRNDQ9UKY0 176 aa2.31□□□□□ -2.04
ATXN3-234ENST00000555958 LSM2Q9Y333 95 aaKnown RBP2.31□□□□□ -2.04
ATXN3-234ENST00000555958 CHTOPQ9Y3Y2 248 aaKnown RBP2.31□□□□□ -2.04
ATXN3-234ENST00000555958 TIMM8BQ9Y5J9 83 aaPredicted RBP2.31□□□□□ -2.04
ATXN3-234ENST00000555958 LY96Q9Y6Y9 160 aa2.31□□□□□ -2.04
ATXN3-234ENST00000555958 ERICH4A6NGS2 130 aa2.3□□□□□ -2.04
ATXN3-234ENST00000555958 IFITM5A6NNB3 132 aa2.3□□□□□ -2.04
ATXN3-234ENST00000555958 CRYGDP07320 174 aa2.3□□□□□ -2.04
ATXN3-234ENST00000555958 RD3LP0DJH9 198 aa2.3□□□□□ -2.04
ATXN3-234ENST00000555958 PSMB3P49720 205 aa2.3□□□□□ -2.04
ATXN3-234ENST00000555958 AP2S1P53680 142 aaPredicted RBP2.3□□□□□ -2.04
ATXN3-234ENST00000555958 HSPE1P61604 102 aaKnown RBP2.3□□□□□ -2.04
ATXN3-234ENST00000555958 HIST1H1AQ02539 215 aaPredicted RBP2.3□□□□□ -2.04
ATXN3-234ENST00000555958 Q6ZQT7 251 aa2.3□□□□□ -2.04
ATXN3-234ENST00000555958 SLC35G3Q8N808 338 aa2.3□□□□□ -2.04
ATXN3-234ENST00000555958 INO80EQ8NBZ0 244 aaPredicted RBP2.3□□□□□ -2.04
ATXN3-234ENST00000555958 OR5H6Q8NGV6 325 aa2.3□□□□□ -2.04
ATXN3-234ENST00000555958 DNAJC30Q96LL9 226 aa2.3□□□□□ -2.04
ATXN3-234ENST00000555958 RSG1Q9BU20 258 aa2.3□□□□□ -2.04
ATXN3-234ENST00000555958 FKBP11Q9NYL4 201 aa2.3□□□□□ -2.04
ATXN3-234ENST00000555958 RCL1Q9Y2P8 373 aaKnown RBP2.3□□□□□ -2.04
ATXN3-234ENST00000555958 TRGV2A0A075B6R0 118 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 TRGV1A0A0A0MS02 117 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 IRGMA1A4Y4 181 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 ZNF98A6NK75 572 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 A8MTW9 85 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 FAM25EA8MYX2 175 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 RAB3DO95716 219 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 IGHV3-30P01768 117 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 IGHV3-33P01772 117 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 MBP02144 154 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 RLN2P04090 185 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 IGHV3-30-3P0DP02 117 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 IGHV3-30-5P0DP03 117 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 PSMA1P25786 263 aaKnown RBP2.29□□□□□ -2.04
ATXN3-234ENST00000555958 TSPOP30536 169 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 FGF8P55075 233 aaPredicted RBP2.29□□□□□ -2.04
ATXN3-234ENST00000555958 TAS2R60P59551 318 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 SP6Q3SY56 376 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 COX19Q49B96 90 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 MRPL55Q7Z7F7 128 aaKnown RBP2.29□□□□□ -2.04
ATXN3-234ENST00000555958 C15orf56Q8N910 161 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 ZNF738Q8NE65 137 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 OR10J6PQ8NGY7 276 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 BAALCQ8WXS3 180 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 PPP1R14BQ96C90 147 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 LINC00467Q9BRT7 94 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 C9orf16Q9BUW7 83 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 CHAC1Q9BUX1 264 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 MND1Q9BWT6 205 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 MED4Q9NPJ6 270 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 RPRMQ9NS64 109 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 MRPL16Q9NX20 251 aaKnown RBP2.29□□□□□ -2.04
ATXN3-234ENST00000555958 KLF12Q9Y4X4 402 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 ICOSQ9Y6W8 199 aa2.29□□□□□ -2.04
ATXN3-234ENST00000555958 IGKV1D-37A0A075B6S9 117 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 TRAV12-3A0A0B4J271 114 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 LINC00854A0A1B0GVQ3 168 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 C7orf66A4D0T2 115 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 GPR31O00270 319 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 ISLRO14498 428 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 ARL6IP5O75915 188 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 IGKV4-1P06312 121 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 OR5AC1P0C628 307 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 SFTA3P0C7M3 94 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 RAB3BP20337 219 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 EVI2AP22794 236 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 HLA-DMAP28067 261 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 HSPA13P48723 471 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 TAS2R20P59543 309 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 YPEL3P61236 119 aaPredicted RBP2.28□□□□□ -2.04
ATXN3-234ENST00000555958 CACNG7P62955 275 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 SSX1Q16384 188 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 C10orf67Q8IYJ2 551 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 OR8I2Q8N0Y5 310 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 TMEM263Q8WUH6 116 aaKnown RBP2.28□□□□□ -2.04
ATXN3-234ENST00000555958 TP53RKQ96S44 253 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 TSC22D3Q99576 134 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 FKBP14Q9NWM8 211 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 MCUBQ9NWR8 336 aa2.28□□□□□ -2.04
ATXN3-234ENST00000555958 FUT9Q9Y231 359 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms