RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 DEFB127Q9H1M4 99 aa11.24□□□□□ -0.61
SIX1-205ENST00000555955 SIGLEC9Q9Y336 463 aa11.24□□□□□ -0.61
SIX1-205ENST00000555955 FAM236AA0A1B0GUQ0 79 aa11.24□□□□□ -0.61
SIX1-205ENST00000555955 FAM236BA0A1B0GV22 79 aa11.24□□□□□ -0.61
SIX1-205ENST00000555955 CCL3L1P16619 93 aa11.24□□□□□ -0.61
SIX1-205ENST00000555955 CEMP1Q6PRD7 247 aaPredicted RBP11.24□□□□□ -0.61
SIX1-205ENST00000555955 SLC25A29Q8N8R3 303 aa11.24□□□□□ -0.61
SIX1-205ENST00000555955 BEX4Q9NWD9 120 aaPredicted RBP11.24□□□□□ -0.61
SIX1-205ENST00000555955 J3KT08 172 aa11.23□□□□□ -0.61
SIX1-205ENST00000555955 TCF15Q12870 199 aa11.23□□□□□ -0.61
SIX1-205ENST00000555955 MSMPQ1L6U9 139 aa11.23□□□□□ -0.61
SIX1-205ENST00000555955 TOMM6Q96B49 74 aa11.23□□□□□ -0.61
SIX1-205ENST00000555955 TRGV11A0A075B6L2 103 aa11.23□□□□□ -0.61
SIX1-205ENST00000555955 WIPF1O43516 503 aa11.23□□□□□ -0.61
SIX1-205ENST00000555955 TMEM101Q96IK0 257 aa11.23□□□□□ -0.61
SIX1-205ENST00000555955 SMIM2Q9BVW6 85 aa11.23□□□□□ -0.61
SIX1-205ENST00000555955 TRBV10-2A0A0K0K1G8 114 aa11.22□□□□□ -0.61
SIX1-205ENST00000555955 I3L2K1 104 aa11.22□□□□□ -0.61
SIX1-205ENST00000555955 P0DMU3 169 aa11.22□□□□□ -0.61
SIX1-205ENST00000555955 FAM231AP0DMU4 169 aa11.22□□□□□ -0.61
SIX1-205ENST00000555955 FAM231CP0DMU5 169 aa11.22□□□□□ -0.61
SIX1-205ENST00000555955 Q1RN00 199 aa11.22□□□□□ -0.61
SIX1-205ENST00000555955 IGFL4Q6B9Z1 124 aa11.22□□□□□ -0.61
SIX1-205ENST00000555955 TRBV7-7A0A0K0K1E9 115 aa11.22□□□□□ -0.61
SIX1-205ENST00000555955 CFIP05156 583 aa11.22□□□□□ -0.61
SIX1-205ENST00000555955 SRSF2Q01130 221 aaKnown RBP11.22□□□□□ -0.61
SIX1-205ENST00000555955 ORMDL2Q53FV1 153 aa11.22□□□□□ -0.61
SIX1-205ENST00000555955 LRRC75A-AS1Q8N1F1 130 aa11.22□□□□□ -0.61
SIX1-205ENST00000555955 PSMG3-AS1Q96PY0 264 aa11.22□□□□□ -0.61
SIX1-205ENST00000555955 ERCC8Q13216 396 aa11.22□□□□□ -0.61
SIX1-205ENST00000555955 Q6ZT83 130 aa11.22□□□□□ -0.61
SIX1-205ENST00000555955 IL17RELQ6ZVW7 336 aa11.22□□□□□ -0.61
SIX1-205ENST00000555955 C2orf82Q6UX34 121 aa11.21□□□□□ -0.61
SIX1-205ENST00000555955 C3orf22Q8N5N4 141 aa11.21□□□□□ -0.61
SIX1-205ENST00000555955 DUX3Q96PT4 197 aa11.21□□□□□ -0.61
SIX1-205ENST00000555955 RNF7Q9UBF6 113 aa11.21□□□□□ -0.61
SIX1-205ENST00000555955 CNTFRP26992 372 aa11.21□□□□□ -0.62
SIX1-205ENST00000555955 HERVK_113P61574 105 aa11.21□□□□□ -0.62
SIX1-205ENST00000555955 PMVKQ15126 192 aa11.21□□□□□ -0.62
SIX1-205ENST00000555955 CNEP1R1Q8N9A8 125 aa11.21□□□□□ -0.62
SIX1-205ENST00000555955 RAI1Q7Z5J4 1906 aaPredicted RBP11.2□□□□□ -0.62
SIX1-205ENST00000555955 RBAKDNA6NC62 111 aa11.2□□□□□ -0.62
SIX1-205ENST00000555955 CD3EP07766 207 aa11.2□□□□□ -0.62
SIX1-205ENST00000555955 C2orf66Q6UXQ4 117 aa11.2□□□□□ -0.62
SIX1-205ENST00000555955 EIF4EBP3O60516 100 aaPredicted RBP11.2□□□□□ -0.62
SIX1-205ENST00000555955 TMEM263Q8WUH6 116 aaKnown RBP11.2□□□□□ -0.62
SIX1-205ENST00000555955 IGHV1-18A0A0C4DH31 117 aa11.19□□□□□ -0.62
SIX1-205ENST00000555955 C11orf86A6NJI1 115 aa11.19□□□□□ -0.62
SIX1-205ENST00000555955 CFHR4Q92496 578 aa11.19□□□□□ -0.62
SIX1-205ENST00000555955 LINC01600Q96MT4 127 aa11.19□□□□□ -0.62
SIX1-205ENST00000555955 BDP1A6H8Y1 2624 aa11.19□□□□□ -0.62
SIX1-205ENST00000555955 TEX22C9J3V5 150 aa11.18□□□□□ -0.62
SIX1-205ENST00000555955 TSPEAR-AS2P59090 65 aa11.18□□□□□ -0.62
SIX1-205ENST00000555955 EBI3Q14213 229 aa11.18□□□□□ -0.62
SIX1-205ENST00000555955 ZNF672Q499Z4 452 aaPredicted RBP11.18□□□□□ -0.62
SIX1-205ENST00000555955 C1orf162Q8NEQ5 155 aaPredicted RBP11.18□□□□□ -0.62
SIX1-205ENST00000555955 SPRR3Q9UBC9 169 aa11.18□□□□□ -0.62
SIX1-205ENST00000555955 IGKV3D-20A0A0C4DH25 116 aa11.18□□□□□ -0.62
SIX1-205ENST00000555955 UQCRQO14949 82 aa11.18□□□□□ -0.62
SIX1-205ENST00000555955 POM121L12Q8N7R1 296 aa11.18□□□□□ -0.62
SIX1-205ENST00000555955 FAM240AA0A1B0GVK7 77 aa11.17□□□□□ -0.62
SIX1-205ENST00000555955 C14orf178Q8N769 122 aaPredicted RBP11.17□□□□□ -0.62
SIX1-205ENST00000555955 S4R3C0 116 aa11.17□□□□□ -0.62
SIX1-205ENST00000555955 A0A1B0GX51 115 aa11.17□□□□□ -0.62
SIX1-205ENST00000555955 ZNF22P17026 224 aaPredicted RBP11.17□□□□□ -0.62
SIX1-205ENST00000555955 SPANXN1Q5VSR9 72 aa11.17□□□□□ -0.62
SIX1-205ENST00000555955 OR13C6PQ8NH95 151 aa11.17□□□□□ -0.62
SIX1-205ENST00000555955 MED13Q9UHV7 2174 aa11.17□□□□□ -0.62
SIX1-205ENST00000555955 SUMO2P61956 95 aaKnown RBP11.17□□□□□ -0.62
SIX1-205ENST00000555955 KALRNO60229 2985 aa11.16□□□□□ -0.62
SIX1-205ENST00000555955 TRGV5A0A0B4J1U4 118 aa11.16□□□□□ -0.62
SIX1-205ENST00000555955 K7EIM0 57 aa11.16□□□□□ -0.62
SIX1-205ENST00000555955 LINC00526Q96FQ7 95 aa11.16□□□□□ -0.62
SIX1-205ENST00000555955 A0A0B4J2C4 111 aa11.16□□□□□ -0.62
SIX1-205ENST00000555955 H7C423 109 aa11.16□□□□□ -0.62
SIX1-205ENST00000555955 IGLV1-44P01699 117 aa11.16□□□□□ -0.62
SIX1-205ENST00000555955 CRYGDP07320 174 aa11.16□□□□□ -0.62
SIX1-205ENST00000555955 SAP25Q8TEE9 199 aa11.16□□□□□ -0.62
SIX1-205ENST00000555955 DEFB104AQ8WTQ1 72 aa11.16□□□□□ -0.62
SIX1-205ENST00000555955 C11orf21Q9P2W6 132 aa11.16□□□□□ -0.62
SIX1-205ENST00000555955 ZFHX4Q86UP3 3567 aa11.15□□□□□ -0.62
SIX1-205ENST00000555955 F5H768 121 aa11.15□□□□□ -0.62
SIX1-205ENST00000555955 TMEM170BQ5T4T1 132 aa11.15□□□□□ -0.62
SIX1-205ENST00000555955 TMEM200BQ69YZ2 307 aa11.15□□□□□ -0.62
SIX1-205ENST00000555955 IGLV4-69A0A075B6H9 119 aa11.15□□□□□ -0.62
SIX1-205ENST00000555955 ZNF883P0CG24 379 aa11.15□□□□□ -0.62
SIX1-205ENST00000555955 PLA2G2CQ5R387 149 aa11.15□□□□□ -0.62
SIX1-205ENST00000555955 DYNAPQ8N1N2 210 aa11.15□□□□□ -0.62
SIX1-205ENST00000555955 CDX4O14627 284 aaPredicted RBP11.14□□□□□ -0.63
SIX1-205ENST00000555955 MFAP4P55083 255 aa11.14□□□□□ -0.63
SIX1-205ENST00000555955 IMUPQ9GZP8 106 aa11.14□□□□□ -0.63
SIX1-205ENST00000555955 LINC00527Q9UJ94 153 aa11.14□□□□□ -0.63
SIX1-205ENST00000555955 TRIAP1O43715 76 aa11.14□□□□□ -0.63
SIX1-205ENST00000555955 PAPPA-AS1Q5QFB9 102 aa11.14□□□□□ -0.63
SIX1-205ENST00000555955 MUSTN1Q8IVN3 82 aa11.14□□□□□ -0.63
SIX1-205ENST00000555955 IGHV7-4-1A0A0J9YVY3 117 aa11.13□□□□□ -0.63
SIX1-205ENST00000555955 CRYGBP07316 175 aa11.13□□□□□ -0.63
SIX1-205ENST00000555955 TNFAIP6P98066 277 aaPredicted RBP11.13□□□□□ -0.63
SIX1-205ENST00000555955 DKK4Q9UBT3 224 aa11.13□□□□□ -0.63
SIX1-205ENST00000555955 COL27A1Q8IZC6 1860 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms