RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 A0A087WX48 190 aa12.34□□□□□ -0.43
TUBB3-209ENST00000555609 IGF1P05019 195 aa12.34□□□□□ -0.43
TUBB3-209ENST00000555609 PLNP26678 52 aa12.34□□□□□ -0.43
TUBB3-209ENST00000555609 ARL3P36405 182 aa12.34□□□□□ -0.43
TUBB3-209ENST00000555609 ORMDL2Q53FV1 153 aa12.34□□□□□ -0.43
TUBB3-209ENST00000555609 OR10J6PQ8NGY7 276 aa12.34□□□□□ -0.43
TUBB3-209ENST00000555609 H3BUT2 72 aa12.34□□□□□ -0.43
TUBB3-209ENST00000555609 PPP1R17O96001 155 aa12.34□□□□□ -0.43
TUBB3-209ENST00000555609 ABCA4P78363 2273 aa12.33□□□□□ -0.44
TUBB3-209ENST00000555609 IGHV1-69DA0A0B4J2H0 117 aa12.33□□□□□ -0.44
TUBB3-209ENST00000555609 A0A1W2PPM0 123 aa12.33□□□□□ -0.44
TUBB3-209ENST00000555609 IGHV1-69P01742 117 aa12.33□□□□□ -0.44
TUBB3-209ENST00000555609 UFC1Q9Y3C8 167 aa12.33□□□□□ -0.44
TUBB3-209ENST00000555609 IGHV3OR16-13A0A075B7E8 117 aa12.32□□□□□ -0.44
TUBB3-209ENST00000555609 IGHV3-74A0A0B4J1X5 117 aa12.32□□□□□ -0.44
TUBB3-209ENST00000555609 M0R381 172 aa12.32□□□□□ -0.44
TUBB3-209ENST00000555609 ZNF207O43670 478 aaKnown RBP12.32□□□□□ -0.44
TUBB3-209ENST00000555609 CIDEAO60543 219 aa12.32□□□□□ -0.44
TUBB3-209ENST00000555609 CHAC1Q9BUX1 264 aa12.32□□□□□ -0.44
TUBB3-209ENST00000555609 SMIM2Q9BVW6 85 aa12.32□□□□□ -0.44
TUBB3-209ENST00000555609 TM2D2Q9BX73 214 aa12.32□□□□□ -0.44
TUBB3-209ENST00000555609 ZC2HC1BQ5TFG8 222 aa12.31□□□□□ -0.44
TUBB3-209ENST00000555609 APRG1Q8IVJ8 170 aa12.31□□□□□ -0.44
TUBB3-209ENST00000555609 IGKV2D-26A0A0A0MRZ7 120 aa12.31□□□□□ -0.44
TUBB3-209ENST00000555609 IGHV3-49A0A0A0MS15 119 aa12.31□□□□□ -0.44
TUBB3-209ENST00000555609 LINC01619G3V211 115 aa12.31□□□□□ -0.44
TUBB3-209ENST00000555609 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.31□□□□□ -0.44
TUBB3-209ENST00000555609 SOCS3O14543 225 aa12.31□□□□□ -0.44
TUBB3-209ENST00000555609 FABP2P12104 132 aa12.31□□□□□ -0.44
TUBB3-209ENST00000555609 ZFAND2AQ8N6M9 145 aa12.31□□□□□ -0.44
TUBB3-209ENST00000555609 FAM19A4Q96LR4 140 aa12.31□□□□□ -0.44
TUBB3-209ENST00000555609 JMJD8Q96S16 334 aa12.31□□□□□ -0.44
TUBB3-209ENST00000555609 DPH3P1Q9H4G8 78 aa12.31□□□□□ -0.44
TUBB3-209ENST00000555609 ADGRG4Q8IZF6 3080 aa12.31□□□□□ -0.44
TUBB3-209ENST00000555609 TRBV25-1A0A075B6N4 114 aa12.3□□□□□ -0.44
TUBB3-209ENST00000555609 LINC01549A6NIU2 74 aa12.3□□□□□ -0.44
TUBB3-209ENST00000555609 H3BVH4 76 aa12.3□□□□□ -0.44
TUBB3-209ENST00000555609 H7C1H1 209 aa12.3□□□□□ -0.44
TUBB3-209ENST00000555609 ASIPP42127 132 aa12.3□□□□□ -0.44
TUBB3-209ENST00000555609 RNF151Q2KHN1 245 aa12.3□□□□□ -0.44
TUBB3-209ENST00000555609 C20orf173Q96LM9 149 aa12.3□□□□□ -0.44
TUBB3-209ENST00000555609 SAMD13Q5VXD3 122 aa12.29□□□□□ -0.44
TUBB3-209ENST00000555609 GTSCR1Q86UQ5 136 aa12.29□□□□□ -0.44
TUBB3-209ENST00000555609 CEND1Q8N111 149 aa12.29□□□□□ -0.44
TUBB3-209ENST00000555609 VPS25Q9BRG1 176 aa12.29□□□□□ -0.44
TUBB3-209ENST00000555609 TMEM160Q9NX00 188 aa12.29□□□□□ -0.44
TUBB3-209ENST00000555609 MRPL35Q9NZE8 188 aaKnown RBP12.29□□□□□ -0.44
TUBB3-209ENST00000555609 MYO18BQ8IUG5 2567 aa12.29□□□□□ -0.44
TUBB3-209ENST00000555609 TRAV40A0A0B4J280 105 aa12.29□□□□□ -0.44
TUBB3-209ENST00000555609 NDUFS8O00217 210 aa12.29□□□□□ -0.44
TUBB3-209ENST00000555609 IGHG2P01859 326 aa12.29□□□□□ -0.44
TUBB3-209ENST00000555609 SAMD5Q5TGI4 173 aa12.29□□□□□ -0.44
TUBB3-209ENST00000555609 TOMM6Q96B49 74 aa12.29□□□□□ -0.44
TUBB3-209ENST00000555609 SPCS1Q9Y6A9 102 aa12.29□□□□□ -0.44
TUBB3-209ENST00000555609 F8VRH5 84 aa12.28□□□□□ -0.44
TUBB3-209ENST00000555609 GCSHP23434 173 aa12.28□□□□□ -0.44
TUBB3-209ENST00000555609 SUMO2P61956 95 aaKnown RBP12.28□□□□□ -0.44
TUBB3-209ENST00000555609 PRR9Q5T870 116 aa12.28□□□□□ -0.44
TUBB3-209ENST00000555609 TMEM219Q86XT9 240 aa12.28□□□□□ -0.44
TUBB3-209ENST00000555609 GPHB5Q86YW7 130 aa12.28□□□□□ -0.44
TUBB3-209ENST00000555609 POM121L12Q8N7R1 296 aa12.28□□□□□ -0.44
TUBB3-209ENST00000555609 S100A4P26447 101 aaKnown RBP12.27□□□□□ -0.44
TUBB3-209ENST00000555609 TCTAP57738 103 aa12.27□□□□□ -0.44
TUBB3-209ENST00000555609 RPL32P62910 135 aaKnown RBP12.27□□□□□ -0.44
TUBB3-209ENST00000555609 FLNCQ14315 2725 aa12.27□□□□□ -0.45
TUBB3-209ENST00000555609 TRAV26-2A0A0B4J265 109 aa12.27□□□□□ -0.45
TUBB3-209ENST00000555609 PIMREGQ9BSJ6 248 aa12.27□□□□□ -0.45
TUBB3-209ENST00000555609 CSTL1Q9H114 145 aa12.27□□□□□ -0.45
TUBB3-209ENST00000555609 PHLDA3Q9Y5J5 127 aa12.27□□□□□ -0.45
TUBB3-209ENST00000555609 FASNP49327 2511 aaKnown RBP12.27□□□□□ -0.45
TUBB3-209ENST00000555609 FXYD2P54710 66 aa12.26□□□□□ -0.45
TUBB3-209ENST00000555609 NEGR1Q7Z3B1 354 aa12.26□□□□□ -0.45
TUBB3-209ENST00000555609 RAB37Q96AX2 223 aa12.26□□□□□ -0.45
TUBB3-209ENST00000555609 HELZ2Q9BYK8 2649 aaKnown RBP12.26□□□□□ -0.45
TUBB3-209ENST00000555609 GCN1Q92616 2671 aaKnown RBP12.26□□□□□ -0.45
TUBB3-209ENST00000555609 A6NDX4 124 aa12.25□□□□□ -0.45
TUBB3-209ENST00000555609 NXPH4O95158 308 aa12.25□□□□□ -0.45
TUBB3-209ENST00000555609 IGHV4-39P01824 125 aa12.25□□□□□ -0.45
TUBB3-209ENST00000555609 UNQ9165/PRO28630Q6UXU0 137 aa12.25□□□□□ -0.45
TUBB3-209ENST00000555609 SVIPQ8NHG7 77 aa12.25□□□□□ -0.45
TUBB3-209ENST00000555609 RASL10AQ92737 203 aa12.25□□□□□ -0.45
TUBB3-209ENST00000555609 SCGB3A1Q96QR1 104 aa12.25□□□□□ -0.45
TUBB3-209ENST00000555609 ZNF580Q9UK33 172 aa12.25□□□□□ -0.45
TUBB3-209ENST00000555609 PHLDA1Q8WV24 401 aaPredicted RBP12.25□□□□□ -0.45
TUBB3-209ENST00000555609 COL12A1Q99715 3063 aa12.25□□□□□ -0.45
TUBB3-209ENST00000555609 TENM4Q6N022 2769 aa12.24□□□□□ -0.45
TUBB3-209ENST00000555609 K7EMT4 169 aa12.24□□□□□ -0.45
TUBB3-209ENST00000555609 NEXN-AS1Q8NBZ9 246 aa12.24□□□□□ -0.45
TUBB3-209ENST00000555609 G3V4G9 280 aa12.23□□□□□ -0.45
TUBB3-209ENST00000555609 ANXA2RQ3ZCQ2 193 aa12.23□□□□□ -0.45
TUBB3-209ENST00000555609 Q6ZQT7 251 aa12.23□□□□□ -0.45
TUBB3-209ENST00000555609 IGHV4OR15-8A0A075B7B6 117 aa12.22□□□□□ -0.45
TUBB3-209ENST00000555609 A0A087WW49 117 aa12.22□□□□□ -0.45
TUBB3-209ENST00000555609 ID1P41134 155 aa12.22□□□□□ -0.45
TUBB3-209ENST00000555609 LINC00527Q9UJ94 153 aa12.22□□□□□ -0.45
TUBB3-209ENST00000555609 OR11H12B2RN74 326 aa12.21□□□□□ -0.45
TUBB3-209ENST00000555609 E9PLD3 99 aa12.21□□□□□ -0.45
TUBB3-209ENST00000555609 IGLV1-40P01703 118 aa12.21□□□□□ -0.45
TUBB3-209ENST00000555609 TRBV12-3P01733 135 aa12.21□□□□□ -0.45
TUBB3-209ENST00000555609 RNASE4P34096 147 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms