RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 APOHP02749 345 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-214ENST00000554604 RPL35AP18077 110 aaKnown RBP9.17□□□□□ -0.94
SHMT2-214ENST00000554604 Q6ZWC4 215 aa9.17□□□□□ -0.94
SHMT2-214ENST00000554604 WFDC3Q8IUB2 231 aa9.17□□□□□ -0.94
SHMT2-214ENST00000554604 APRG1Q8IVJ8 170 aa9.17□□□□□ -0.94
SHMT2-214ENST00000554604 GLMPQ8WWB7 406 aa9.17□□□□□ -0.94
SHMT2-214ENST00000554604 OVOL2Q9BRP0 275 aa9.17□□□□□ -0.94
SHMT2-214ENST00000554604 KIR2DL5BA0A0G2JN68 375 aa9.16□□□□□ -0.94
SHMT2-214ENST00000554604 KIR2DL5BA0A0G2JPC4 375 aa9.16□□□□□ -0.94
SHMT2-214ENST00000554604 A0A1B0GXF2 115 aa9.16□□□□□ -0.94
SHMT2-214ENST00000554604 HIGD1CA8MV81 97 aa9.16□□□□□ -0.94
SHMT2-214ENST00000554604 SPINK4O60575 86 aa9.16□□□□□ -0.94
SHMT2-214ENST00000554604 CT45A10P0DMU9 189 aa9.16□□□□□ -0.94
SHMT2-214ENST00000554604 FOXA3P55318 350 aaPredicted RBP9.16□□□□□ -0.94
SHMT2-214ENST00000554604 Q0VG73 95 aa9.16□□□□□ -0.94
SHMT2-214ENST00000554604 DEFB135Q30KP9 77 aa9.16□□□□□ -0.94
SHMT2-214ENST00000554604 MRPL54Q6P161 138 aaKnown RBP9.16□□□□□ -0.94
SHMT2-214ENST00000554604 KIR2DL5AQ8N109 375 aa9.16□□□□□ -0.94
SHMT2-214ENST00000554604 KIR2DL5BQ8NHK3 375 aa9.16□□□□□ -0.94
SHMT2-214ENST00000554604 HIST1H2BLQ99880 126 aa9.16□□□□□ -0.94
SHMT2-214ENST00000554604 MS4A6AQ9H2W1 248 aa9.16□□□□□ -0.94
SHMT2-214ENST00000554604 IGKV2-40A0A087WW87 121 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-214ENST00000554604 SPRY2O43597 315 aa9.15□□□□□ -0.94
SHMT2-214ENST00000554604 IGKV2D-40P01614 121 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-214ENST00000554604 CRISP2P16562 243 aa9.15□□□□□ -0.94
SHMT2-214ENST00000554604 OR2D3Q8NGH3 330 aa9.15□□□□□ -0.94
SHMT2-214ENST00000554604 GTSF1Q8WW33 167 aa9.15□□□□□ -0.94
SHMT2-214ENST00000554604 MAP6D1Q9H9H5 199 aa9.15□□□□□ -0.94
SHMT2-214ENST00000554604 TP53TG1Q9Y2A0 90 aa9.15□□□□□ -0.94
SHMT2-214ENST00000554604 TRAV8-2A0A0B4J237 113 aa9.14□□□□□ -0.95
SHMT2-214ENST00000554604 AMBPP02760 352 aa9.14□□□□□ -0.95
SHMT2-214ENST00000554604 ESDP10768 282 aa9.14□□□□□ -0.95
SHMT2-214ENST00000554604 FABP4P15090 132 aa9.14□□□□□ -0.95
SHMT2-214ENST00000554604 HLA-DMBP28068 263 aa9.14□□□□□ -0.95
SHMT2-214ENST00000554604 CRIP1P50238 77 aa9.14□□□□□ -0.95
SHMT2-214ENST00000554604 RAB4BP61018 213 aa9.14□□□□□ -0.95
SHMT2-214ENST00000554604 ZNF124Q15973 351 aa9.14□□□□□ -0.95
SHMT2-214ENST00000554604 PDZD11Q5EBL8 140 aa9.14□□□□□ -0.95
SHMT2-214ENST00000554604 OR10J3Q5JRS4 329 aa9.14□□□□□ -0.95
SHMT2-214ENST00000554604 DNLZQ5SXM8 178 aa9.14□□□□□ -0.95
SHMT2-214ENST00000554604 Q6AWC8 147 aa9.14□□□□□ -0.95
SHMT2-214ENST00000554604 OR10D4PQ8NGN7 298 aa9.14□□□□□ -0.95
SHMT2-214ENST00000554604 TMEM18Q96B42 140 aa9.14□□□□□ -0.95
SHMT2-214ENST00000554604 C8orf49Q96NF6 230 aa9.14□□□□□ -0.95
SHMT2-214ENST00000554604 NDFIP1Q9BT67 221 aa9.14□□□□□ -0.95
SHMT2-214ENST00000554604 TRAV2A0A0B4J234 112 aa9.13□□□□□ -0.95
SHMT2-214ENST00000554604 APCSP02743 223 aa9.13□□□□□ -0.95
SHMT2-214ENST00000554604 DEFB131AP59861 70 aa9.13□□□□□ -0.95
SHMT2-214ENST00000554604 HBBP68871 147 aa9.13□□□□□ -0.95
SHMT2-214ENST00000554604 PACRGQ96M98 296 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-214ENST00000554604 VGLL1Q99990 258 aa9.13□□□□□ -0.95
SHMT2-214ENST00000554604 CSTL1Q9H114 145 aa9.13□□□□□ -0.95
SHMT2-214ENST00000554604 PPP1R14DQ9NXH3 145 aa9.13□□□□□ -0.95
SHMT2-214ENST00000554604 ZNF705FA8MVS1 300 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-214ENST00000554604 RPS20P60866 119 aaKnown RBP9.12□□□□□ -0.95
SHMT2-214ENST00000554604 FAM162BQ5T6X4 162 aa9.12□□□□□ -0.95
SHMT2-214ENST00000554604 GDF5OSQ5U4N7 250 aa9.12□□□□□ -0.95
SHMT2-214ENST00000554604 IGFL4Q6B9Z1 124 aa9.12□□□□□ -0.95
SHMT2-214ENST00000554604 GATD1Q8NB37 220 aa9.12□□□□□ -0.95
SHMT2-214ENST00000554604 RNF183Q96D59 192 aa9.12□□□□□ -0.95
SHMT2-214ENST00000554604 PGLYRP4Q96LB8 373 aa9.12□□□□□ -0.95
SHMT2-214ENST00000554604 TP53TG3Q9ULZ0 132 aa9.12□□□□□ -0.95
SHMT2-214ENST00000554604 A0A0J9YWU9 116 aa9.11□□□□□ -0.95
SHMT2-214ENST00000554604 LCE6AA0A183 80 aa9.11□□□□□ -0.95
SHMT2-214ENST00000554604 A0A1B0GW15 77 aa9.11□□□□□ -0.95
SHMT2-214ENST00000554604 GRIFINA4D1Z8 144 aa9.11□□□□□ -0.95
SHMT2-214ENST00000554604 PRAC2D3DTV9 90 aa9.11□□□□□ -0.95
SHMT2-214ENST00000554604 SH2D1AO60880 128 aa9.11□□□□□ -0.95
SHMT2-214ENST00000554604 PYY3Q5JQD4 70 aa9.11□□□□□ -0.95
SHMT2-214ENST00000554604 C9orf47Q6ZRZ4 202 aa9.11□□□□□ -0.95
SHMT2-214ENST00000554604 STHQ8IWL8 128 aa9.11□□□□□ -0.95
SHMT2-214ENST00000554604 TMEM256Q8N2U0 113 aa9.11□□□□□ -0.95
SHMT2-214ENST00000554604 RNF182Q8N6D2 247 aa9.11□□□□□ -0.95
SHMT2-214ENST00000554604 C16orf92Q96LL3 132 aa9.11□□□□□ -0.95
SHMT2-214ENST00000554604 A0A1B0GUT8 65 aa9.1□□□□□ -0.95
SHMT2-214ENST00000554604 TMEM189A5PLL7 270 aa9.1□□□□□ -0.95
SHMT2-214ENST00000554604 K7EQG2 157 aa9.1□□□□□ -0.95
SHMT2-214ENST00000554604 SOCS3O14543 225 aa9.1□□□□□ -0.95
SHMT2-214ENST00000554604 ZNF688P0C7X2 276 aa9.1□□□□□ -0.95
SHMT2-214ENST00000554604 S100A12P80511 92 aa9.1□□□□□ -0.95
SHMT2-214ENST00000554604 SLAQ13239 276 aa9.1□□□□□ -0.95
SHMT2-214ENST00000554604 RIGQ13278 110 aa9.1□□□□□ -0.95
SHMT2-214ENST00000554604 Q8TAT8 98 aa9.1□□□□□ -0.95
SHMT2-214ENST00000554604 LENEPQ9Y5L5 61 aa9.1□□□□□ -0.95
SHMT2-214ENST00000554604 FABP5P3A8MUU1 101 aa9.09□□□□□ -0.95
SHMT2-214ENST00000554604 SERF1AO75920 110 aa9.09□□□□□ -0.95
SHMT2-214ENST00000554604 GZMBP10144 247 aa9.09□□□□□ -0.95
SHMT2-214ENST00000554604 SRIP30626 198 aa9.09□□□□□ -0.95
SHMT2-214ENST00000554604 CAMPP49913 170 aa9.09□□□□□ -0.95
SHMT2-214ENST00000554604 ZNF138P52744 262 aa9.09□□□□□ -0.95
SHMT2-214ENST00000554604 LINC00310P59036 64 aa9.09□□□□□ -0.95
SHMT2-214ENST00000554604 ERCC8Q13216 396 aa9.09□□□□□ -0.95
SHMT2-214ENST00000554604 KIAA1644Q3SXP7 199 aa9.09□□□□□ -0.95
SHMT2-214ENST00000554604 TMEM78Q5T7P6 136 aa9.09□□□□□ -0.95
SHMT2-214ENST00000554604 SAMD13Q5VXD3 122 aa9.09□□□□□ -0.95
SHMT2-214ENST00000554604 BAGE3Q86Y29 109 aa9.09□□□□□ -0.95
SHMT2-214ENST00000554604 AGPAT4-IT1Q9H0P7 198 aa9.09□□□□□ -0.95
SHMT2-214ENST00000554604 NRN1Q9NPD7 142 aa9.09□□□□□ -0.95
SHMT2-214ENST00000554604 NIT2Q9NQR4 276 aa9.09□□□□□ -0.95
SHMT2-214ENST00000554604 STARD9Q9P2P6 4700 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms