RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 OR10J6PQ8NGY7 276 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 MARCH1Q8TCQ1 289 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 PPP1R1CQ8WVI7 109 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 PCNPQ8WW12 178 aaKnown RBP3.28□□□□□ -1.88
ATXN3-228ENST00000554592 MRGPRFQ96AM1 343 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 AQP10Q96PS8 301 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 LINC01587Q99440 93 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 SEC11CQ9BY50 192 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 NKX6-2Q9C056 277 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-228ENST00000554592 GFRA4Q9GZZ7 299 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 SMDT1Q9H4I9 107 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 RPRMQ9NS64 109 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 DOK5Q9P104 306 aa3.28□□□□□ -1.88
ATXN3-228ENST00000554592 TIMM8BQ9Y5J9 83 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-228ENST00000554592 TRAV9-2A0A087WT02 112 aa3.27□□□□□ -1.89
ATXN3-228ENST00000554592 A0A0J9YY99 117 aa3.27□□□□□ -1.89
ATXN3-228ENST00000554592 CRXO43186 299 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-228ENST00000554592 SIX6O95475 246 aa3.27□□□□□ -1.89
ATXN3-228ENST00000554592 OXTP01178 125 aa3.27□□□□□ -1.89
ATXN3-228ENST00000554592 APOC3P02656 99 aa3.27□□□□□ -1.89
ATXN3-228ENST00000554592 RLN2P04090 185 aa3.27□□□□□ -1.89
ATXN3-228ENST00000554592 P0C879 139 aa3.27□□□□□ -1.89
ATXN3-228ENST00000554592 AKR1C4P17516 323 aa3.27□□□□□ -1.89
ATXN3-228ENST00000554592 RAB5CP51148 216 aa3.27□□□□□ -1.89
ATXN3-228ENST00000554592 NDUFV3P56181 108 aaKnown RBP3.27□□□□□ -1.89
ATXN3-228ENST00000554592 TAS2R60P59551 318 aa3.27□□□□□ -1.89
ATXN3-228ENST00000554592 SSTP61278 116 aa3.27□□□□□ -1.89
ATXN3-228ENST00000554592 BSXQ3C1V8 233 aa3.27□□□□□ -1.89
ATXN3-228ENST00000554592 OR8G2PQ6IF36 304 aa3.27□□□□□ -1.89
ATXN3-228ENST00000554592 ZNF493Q6ZR52 646 aa3.27□□□□□ -1.89
ATXN3-228ENST00000554592 TMEM144Q7Z5S9 345 aa3.27□□□□□ -1.89
ATXN3-228ENST00000554592 OR51G1Q8NGK1 321 aa3.27□□□□□ -1.89
ATXN3-228ENST00000554592 RNASEH2CQ8TDP1 164 aaKnown RBP3.27□□□□□ -1.89
ATXN3-228ENST00000554592 GPR146Q96CH1 333 aa3.27□□□□□ -1.89
ATXN3-228ENST00000554592 C2orf50Q96LR7 162 aa3.27□□□□□ -1.89
ATXN3-228ENST00000554592 ZNF471Q9BX82 626 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-228ENST00000554592 NOP10Q9NPE3 64 aaKnown RBP3.27□□□□□ -1.89
ATXN3-228ENST00000554592 KCNIP3Q9Y2W7 256 aa3.27□□□□□ -1.89
ATXN3-228ENST00000554592 IGLV4-3A0A075B6K6 122 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 DUXBA0A1W2PPF3 345 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 CRYM-AS1A6NIL9 109 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 SCO1O75880 301 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 IGKV1-5P01602 117 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 HTN1P15515 57 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 UCP1P25874 307 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 MEOX2P50222 304 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 CAV2P51636 162 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 PIGPP57054 158 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 SPCS3P61009 180 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 RND3P61587 244 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 SUPT4H1P63272 117 aaKnown RBP3.26□□□□□ -1.89
ATXN3-228ENST00000554592 HAMPP81172 84 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 IL15RAQ13261 267 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 SMCO1Q147U7 214 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 SPINK13Q1W4C9 94 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 C2orf83Q53S99 150 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 OR8I2Q8N0Y5 310 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 TMEM256Q8N2U0 113 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 LINC00612Q8N6U2 182 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 BPIFCQ8NFQ6 507 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 OR52E5Q8NH55 327 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 LYPD6BQ8NI32 183 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 C16orf74Q96GX8 76 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 SMIM8Q96KF7 97 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 PBDC1Q9BVG4 233 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 BIN3Q9NQY0 253 aa3.26□□□□□ -1.89
ATXN3-228ENST00000554592 A0A096LPF7 62 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 BORCS7-ASMTA0A0B4J1R7 106 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 KRTAP16-1A8MUX0 517 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 FAM25EA8MYX2 175 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 F8W036 122 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 K7EP13 123 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 M0R2Z0 102 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 S100A8P05109 93 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 SEC11BP0C7V7 166 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 DNAH10OSP0CZ25 163 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 PVALBP20472 110 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-228ENST00000554592 GALR1P47211 349 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 SULT1A2P50226 295 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 AKR1C2P52895 323 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 PEA15Q15121 130 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 LINC00518Q8N0U6 118 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 LGI3Q8N145 548 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 C15orf54Q8N8G6 183 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-228ENST00000554592 TMEM263Q8WUH6 116 aaKnown RBP3.25□□□□□ -1.89
ATXN3-228ENST00000554592 ACY3Q96HD9 319 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 VGLL1Q99990 258 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 TCEAL7Q9BRU2 100 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 RTBDNQ9BSG5 229 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-228ENST00000554592 RSG1Q9BU20 258 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 ARV1Q9H2C2 271 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 NAA60Q9H7X0 242 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 SMCO4Q9NRQ5 59 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 CYTL1Q9NRR1 136 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-228ENST00000554592 UQCC1Q9NVA1 299 aa3.25□□□□□ -1.89
ATXN3-228ENST00000554592 TRAV12-2A0A075B6T6 113 aa3.24□□□□□ -1.89
ATXN3-228ENST00000554592 C3orf85A0A1B0GTC6 90 aa3.24□□□□□ -1.89
ATXN3-228ENST00000554592 ZNF98A6NK75 572 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms