RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 HIST1H2BBP33778 126 aa3.53□□□□□ -1.84
PPP4R3A-204ENST00000554574 MEOX2P50222 304 aa3.53□□□□□ -1.84
PPP4R3A-204ENST00000554574 HIST1H2BDP58876 126 aa3.53□□□□□ -1.84
PPP4R3A-204ENST00000554574 HIST1H2BCP62807 126 aa3.53□□□□□ -1.84
PPP4R3A-204ENST00000554574 HIST2H2BEQ16778 126 aa3.53□□□□□ -1.84
PPP4R3A-204ENST00000554574 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.53□□□□□ -1.84
PPP4R3A-204ENST00000554574 GOLT1AQ6ZVE7 132 aa3.53□□□□□ -1.84
PPP4R3A-204ENST00000554574 Q86TA4 180 aa3.53□□□□□ -1.84
PPP4R3A-204ENST00000554574 TMEM183AQ8IXX5 376 aa3.53□□□□□ -1.84
PPP4R3A-204ENST00000554574 HIST1H2BHQ93079 126 aa3.53□□□□□ -1.84
PPP4R3A-204ENST00000554574 HIST1H2BNQ99877 126 aa3.53□□□□□ -1.84
PPP4R3A-204ENST00000554574 HIST1H2BMQ99879 126 aa3.53□□□□□ -1.84
PPP4R3A-204ENST00000554574 Q9HAA7 133 aa3.53□□□□□ -1.84
PPP4R3A-204ENST00000554574 RPH3ALQ9UNE2 315 aa3.53□□□□□ -1.84
PPP4R3A-204ENST00000554574 SMAD5-AS1Q9Y6J3 95 aa3.53□□□□□ -1.84
PPP4R3A-204ENST00000554574 SMIM27A0A1W2PRY6 76 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 ZNF705GA8MUZ8 300 aaPredicted RBP3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 CSN1S1P47710 185 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 RPL19P84098 196 aaKnown RBP3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 PSG3Q16557 428 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 ACTL10Q5JWF8 245 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 OR4X2Q8NGF9 303 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 FRZBQ92765 325 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 RCHY1Q96PM5 261 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 LITAFQ99732 161 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 SLC50A1Q9BRV3 221 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 SAV1Q9H4B6 383 aaPredicted RBP3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 ZNF331Q9NQX6 463 aaPredicted RBP3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 ZNF492Q9P255 531 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 ZFP30Q9Y2G7 519 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 SETD2Q9BYW2 2564 aaPredicted RBP3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 NOTCH2Q04721 2471 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 WNK1Q9H4A3 2382 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 TRAV8-1A0A0A6YYK1 113 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 C19orf71A6NCJ1 209 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 M0R3E3 92 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 GATCO43716 136 aaKnown RBP3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 TRBV12-3P01733 135 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 TRGC1P0CF51 173 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 SLC35B1P78383 322 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 FABP9Q0Z7S8 132 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 COX19Q49B96 90 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 LINC01620Q4KN68 170 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 Q8N2B8 174 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 TMEM86BQ8N661 226 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 MYOZ3Q8TDC0 251 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 TSKUQ8WUA8 353 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 ZNF702PQ9H963 129 aa3.52□□□□□ -1.85
PPP4R3A-204ENST00000554574 SORL1Q92673 2214 aa3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 HIVEP2P31629 2446 aa3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 RBAKDNA6NC62 111 aa3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 FAM231BA6NCW3 169 aa3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 A8MWL6 223 aa3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 CD5LO43866 347 aa3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 P01737 135 aa3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 IGHV3-11P01762 117 aa3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 MT-ND6P03923 174 aa3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 RASL11AQ6T310 242 aa3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 UNQ9165/PRO28630Q6UXU0 137 aa3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 PRNTQ86SH4 94 aa3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 OR4B1Q8NGF8 309 aa3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 GNB1LQ9BYB4 327 aa3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 GFRA4Q9GZZ7 299 aa3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 RPP21Q9H633 154 aaKnown RBP3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 DAZ1Q9NQZ3 744 aaKnown RBP3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 CLEC5AQ9NY25 188 aa3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 PEF1Q9UBV8 284 aaKnown RBP3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 PSG8Q9UQ74 426 aa3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 NSD1Q96L73 2696 aaPredicted RBP3.51□□□□□ -1.85
PPP4R3A-204ENST00000554574 OTOGQ6ZRI0 2925 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 IZUMO1RA6ND01 250 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 KRTAP29-1A8MX34 341 aaPredicted RBP3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 K7EMT4 169 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 ZNF207O43670 478 aaKnown RBP3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 CA1P00915 261 aaPredicted RBP3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 S100A8P05109 93 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 CFC1BP0CG36 223 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 CFC1P0CG37 223 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 NDUFA6P56556 154 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 COA6Q5JTJ3 125 aaKnown RBP3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 SAPCD1Q5SSQ6 148 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 LCN12Q6JVE5 192 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 ADAMTSL5Q6ZMM2 481 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 LINC00322Q6ZN03 302 aaPredicted RBP3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 C18orf65Q6ZTR6 163 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 GPHB5Q86YW7 130 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 SIGLECL1Q8N7X8 197 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 DLX4Q92988 240 aaPredicted RBP3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 ZC2HC1AQ96GY0 325 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 UBE2E2Q96LR5 201 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 NAT8BQ9UHF3 227 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 TRAPPC1Q9Y5R8 145 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 SETXQ7Z333 2677 aaKnown RBP3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 IGHV3OR16-13A0A075B7E8 117 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 IGKV2-40A0A087WW87 121 aaPredicted RBP3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 IGHV3-49A0A0A0MS15 119 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 IGHV3-74A0A0B4J1X5 117 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 IGHV3-66A0A0C4DH42 116 aa3.5□□□□□ -1.85
PPP4R3A-204ENST00000554574 IGHV7-4-1A0A0J9YVY3 117 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms