RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 TM4SF20Q53R12 229 aa11.09□□□□□ -0.63
ACTN1-211ENST00000553882 Q6ZS46 218 aa11.09□□□□□ -0.63
ACTN1-211ENST00000553882 FOXC2Q99958 501 aa11.09□□□□□ -0.63
ACTN1-211ENST00000553882 F6UB75 175 aa11.08□□□□□ -0.64
ACTN1-211ENST00000553882 PF4V1P10720 104 aa11.08□□□□□ -0.64
ACTN1-211ENST00000553882 BLCAPP62952 87 aa11.08□□□□□ -0.64
ACTN1-211ENST00000553882 M0R381 172 aa11.08□□□□□ -0.64
ACTN1-211ENST00000553882 C9orf139Q6ZV77 190 aa11.08□□□□□ -0.64
ACTN1-211ENST00000553882 Q8N8P6 123 aa11.08□□□□□ -0.64
ACTN1-211ENST00000553882 NRACQ8N912 160 aa11.08□□□□□ -0.64
ACTN1-211ENST00000553882 CACNA1AO00555 2505 aa11.08□□□□□ -0.64
ACTN1-211ENST00000553882 IGLV2-18A0A075B6J9 118 aa11.07□□□□□ -0.64
ACTN1-211ENST00000553882 SMIM17P0DL12 118 aa11.07□□□□□ -0.64
ACTN1-211ENST00000553882 KIR3DS1Q14943 382 aa11.07□□□□□ -0.64
ACTN1-211ENST00000553882 PIMREGQ9BSJ6 248 aa11.07□□□□□ -0.64
ACTN1-211ENST00000553882 HIF1ANQ9NWT6 349 aa11.07□□□□□ -0.64
ACTN1-211ENST00000553882 POLQO75417 2590 aa11.07□□□□□ -0.64
ACTN1-211ENST00000553882 LINC01546A6NGU7 62 aa11.07□□□□□ -0.64
ACTN1-211ENST00000553882 SEC11AP67812 179 aa11.07□□□□□ -0.64
ACTN1-211ENST00000553882 CCL19Q99731 98 aa11.07□□□□□ -0.64
ACTN1-211ENST00000553882 DOPEY2Q9Y3R5 2298 aa11.07□□□□□ -0.64
ACTN1-211ENST00000553882 SRD5A1P18405 259 aa11.06□□□□□ -0.64
ACTN1-211ENST00000553882 IGSF10Q6WRI0 2623 aa11.06□□□□□ -0.64
ACTN1-211ENST00000553882 ADAMTSL5Q6ZMM2 481 aa11.06□□□□□ -0.64
ACTN1-211ENST00000553882 PRORYQ9H606 182 aa11.06□□□□□ -0.64
ACTN1-211ENST00000553882 PEF1Q9UBV8 284 aaKnown RBP11.06□□□□□ -0.64
ACTN1-211ENST00000553882 HHLA3Q9XRX5 114 aa11.06□□□□□ -0.64
ACTN1-211ENST00000553882 GTSCR1Q86UQ5 136 aa11.06□□□□□ -0.64
ACTN1-211ENST00000553882 RAB37Q96AX2 223 aa11.06□□□□□ -0.64
ACTN1-211ENST00000553882 DOPEY1Q5JWR5 2465 aa11.06□□□□□ -0.64
ACTN1-211ENST00000553882 ZFAND2AQ8N6M9 145 aa11.05□□□□□ -0.64
ACTN1-211ENST00000553882 OR9G4Q8NGQ1 327 aa11.05□□□□□ -0.64
ACTN1-211ENST00000553882 OR10J6PQ8NGY7 276 aa11.05□□□□□ -0.64
ACTN1-211ENST00000553882 TMEM160Q9NX00 188 aa11.05□□□□□ -0.64
ACTN1-211ENST00000553882 IGHV4-30-2A0A087WSY4 118 aa11.05□□□□□ -0.64
ACTN1-211ENST00000553882 TMEM8BA6NDV4 472 aa11.05□□□□□ -0.64
ACTN1-211ENST00000553882 K7EP13 123 aa11.05□□□□□ -0.64
ACTN1-211ENST00000553882 NDUFA4O00483 81 aa11.05□□□□□ -0.64
ACTN1-211ENST00000553882 IGKCP01834 107 aa11.05□□□□□ -0.64
ACTN1-211ENST00000553882 S100A4P26447 101 aaKnown RBP11.05□□□□□ -0.64
ACTN1-211ENST00000553882 LAGE3Q14657 143 aa11.05□□□□□ -0.64
ACTN1-211ENST00000553882 NPFFR1Q9GZQ6 430 aa11.05□□□□□ -0.64
ACTN1-211ENST00000553882 ATP5J2P56134 94 aa11.05□□□□□ -0.64
ACTN1-211ENST00000553882 RBX1P62877 108 aa11.05□□□□□ -0.64
ACTN1-211ENST00000553882 HSD52Q0P140 79 aa11.05□□□□□ -0.64
ACTN1-211ENST00000553882 ZC2HC1BQ5TFG8 222 aa11.05□□□□□ -0.64
ACTN1-211ENST00000553882 OR4X2Q8NGF9 303 aa11.05□□□□□ -0.64
ACTN1-211ENST00000553882 EDN2P20800 178 aa11.04□□□□□ -0.64
ACTN1-211ENST00000553882 RNASE4P34096 147 aaKnown RBP11.04□□□□□ -0.64
ACTN1-211ENST00000553882 C10orf105Q8TEF2 133 aa11.04□□□□□ -0.64
ACTN1-211ENST00000553882 MEGF9Q9H1U4 602 aa11.04□□□□□ -0.64
ACTN1-211ENST00000553882 A6NDN8 102 aa11.04□□□□□ -0.64
ACTN1-211ENST00000553882 H3BUT2 72 aa11.04□□□□□ -0.64
ACTN1-211ENST00000553882 NDUFS8O00217 210 aa11.04□□□□□ -0.64
ACTN1-211ENST00000553882 CRIP2P52943 208 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-211ENST00000553882 RNF151Q2KHN1 245 aa11.04□□□□□ -0.64
ACTN1-211ENST00000553882 C14orf178Q8N769 122 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-211ENST00000553882 ZMAT4Q9H898 229 aa11.04□□□□□ -0.64
ACTN1-211ENST00000553882 MRPL35Q9NZE8 188 aaKnown RBP11.04□□□□□ -0.64
ACTN1-211ENST00000553882 CREBBPQ92793 2442 aa11.03□□□□□ -0.64
ACTN1-211ENST00000553882 ACACBO00763 2458 aa11.03□□□□□ -0.64
ACTN1-211ENST00000553882 SOCS3O14543 225 aa11.03□□□□□ -0.64
ACTN1-211ENST00000553882 IGHG2P01859 326 aa11.03□□□□□ -0.64
ACTN1-211ENST00000553882 AP1S3Q96PC3 154 aa11.03□□□□□ -0.64
ACTN1-211ENST00000553882 JMJD8Q96S16 334 aa11.03□□□□□ -0.64
ACTN1-211ENST00000553882 IGHV4-4A0A075B6R2 117 aa11.03□□□□□ -0.64
ACTN1-211ENST00000553882 ANXA2RQ3ZCQ2 193 aa11.03□□□□□ -0.64
ACTN1-211ENST00000553882 MYOZ3Q8TDC0 251 aa11.03□□□□□ -0.64
ACTN1-211ENST00000553882 WFDC12Q8WWY7 111 aa11.03□□□□□ -0.64
ACTN1-211ENST00000553882 LINC00477Q96M19 166 aa11.03□□□□□ -0.64
ACTN1-211ENST00000553882 TRAV21A0A0B4J279 112 aa11.02□□□□□ -0.65
ACTN1-211ENST00000553882 DPM2O94777 84 aa11.02□□□□□ -0.65
ACTN1-211ENST00000553882 CLUHP3Q96NS8 147 aa11.02□□□□□ -0.65
ACTN1-211ENST00000553882 ATP6V0BQ99437 205 aa11.02□□□□□ -0.65
ACTN1-211ENST00000553882 RHPN1-AS1Q9BWJ2 59 aa11.02□□□□□ -0.65
ACTN1-211ENST00000553882 PHLDA3Q9Y5J5 127 aa11.02□□□□□ -0.65
ACTN1-211ENST00000553882 ZFYVE26Q68DK2 2539 aa11.02□□□□□ -0.65
ACTN1-211ENST00000553882 GAGE12BA1L429 117 aa11.02□□□□□ -0.65
ACTN1-211ENST00000553882 SIVA1O15304 175 aa11.02□□□□□ -0.65
ACTN1-211ENST00000553882 GNRH2O43555 120 aa11.02□□□□□ -0.65
ACTN1-211ENST00000553882 GCSHP23434 173 aa11.02□□□□□ -0.65
ACTN1-211ENST00000553882 RPL39LQ96EH5 51 aaKnown RBP11.02□□□□□ -0.65
ACTN1-211ENST00000553882 CST9LQ9H4G1 147 aa11.02□□□□□ -0.65
ACTN1-211ENST00000553882 FAM208BQ5VWN6 2430 aa11.01□□□□□ -0.65
ACTN1-211ENST00000553882 SORL1Q92673 2214 aa11.01□□□□□ -0.65
ACTN1-211ENST00000553882 GAGE10A6NGK3 116 aa11.01□□□□□ -0.65
ACTN1-211ENST00000553882 ATP5LO75964 103 aa11.01□□□□□ -0.65
ACTN1-211ENST00000553882 AVPP01185 164 aa11.01□□□□□ -0.65
ACTN1-211ENST00000553882 MGPP08493 103 aa11.01□□□□□ -0.65
ACTN1-211ENST00000553882 USMG5Q96IX5 58 aa11.01□□□□□ -0.65
ACTN1-211ENST00000553882 LENEPQ9Y5L5 61 aa11.01□□□□□ -0.65
ACTN1-211ENST00000553882 CUBNO60494 3623 aa11.01□□□□□ -0.65
ACTN1-211ENST00000553882 A6NDX4 124 aa11.01□□□□□ -0.65
ACTN1-211ENST00000553882 OVOL1O14753 267 aa11.01□□□□□ -0.65
ACTN1-211ENST00000553882 ASIPP42127 132 aa11.01□□□□□ -0.65
ACTN1-211ENST00000553882 SRSF1Q07955 248 aaKnown RBP eCLIP11.01□□□□□ -0.65
ACTN1-211ENST00000553882 NRGNQ92686 78 aa11.01□□□□□ -0.65
ACTN1-211ENST00000553882 SMIM2Q9BVW6 85 aa11.01□□□□□ -0.65
ACTN1-211ENST00000553882 C9orf118A6NHY6 69 aa11□□□□□ -0.65
ACTN1-211ENST00000553882 H3BRM9 83 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms