RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 C11orf72Q8NBR9 251 aa12.96□□□□□ -0.33
PSEN1-208ENST00000553719 IL17DQ8TAD2 202 aa12.96□□□□□ -0.33
PSEN1-208ENST00000553719 TMEM263Q8WUH6 116 aaKnown RBP12.96□□□□□ -0.33
PSEN1-208ENST00000553719 TP53TG3Q9ULZ0 132 aa12.96□□□□□ -0.33
PSEN1-208ENST00000553719 ADCYAP1P18509 176 aa12.95□□□□□ -0.34
PSEN1-208ENST00000553719 ZNF493Q6ZR52 646 aa12.95□□□□□ -0.34
PSEN1-208ENST00000553719 TYMSP04818 313 aa12.94□□□□□ -0.34
PSEN1-208ENST00000553719 MGST1P10620 155 aaKnown RBP12.94□□□□□ -0.34
PSEN1-208ENST00000553719 OR5I1Q13606 314 aa12.94□□□□□ -0.34
PSEN1-208ENST00000553719 PRR27Q6MZM9 219 aa12.94□□□□□ -0.34
PSEN1-208ENST00000553719 FAM159AQ6UWV7 190 aa12.94□□□□□ -0.34
PSEN1-208ENST00000553719 C16orf74Q96GX8 76 aa12.94□□□□□ -0.34
PSEN1-208ENST00000553719 KCNS1Q96KK3 526 aa12.94□□□□□ -0.34
PSEN1-208ENST00000553719 NAT8Q9UHE5 227 aa12.94□□□□□ -0.34
PSEN1-208ENST00000553719 U3KQK5 164 aa12.94□□□□□ -0.34
PSEN1-208ENST00000553719 TMEM218A2RU14 115 aa12.93□□□□□ -0.34
PSEN1-208ENST00000553719 CBY3A6NI87 242 aa12.93□□□□□ -0.34
PSEN1-208ENST00000553719 KRBOX1C9JBD0 128 aa12.93□□□□□ -0.34
PSEN1-208ENST00000553719 HTN1P15515 57 aa12.93□□□□□ -0.34
PSEN1-208ENST00000553719 RPL23P62829 140 aaKnown RBP12.93□□□□□ -0.34
PSEN1-208ENST00000553719 TMEM241Q24JQ0 296 aa12.93□□□□□ -0.34
PSEN1-208ENST00000553719 IBA57Q5T440 356 aaKnown RBP12.93□□□□□ -0.34
PSEN1-208ENST00000553719 EDA2RQ9HAV5 297 aa12.93□□□□□ -0.34
PSEN1-208ENST00000553719 SDF2L1Q9HCN8 221 aa12.93□□□□□ -0.34
PSEN1-208ENST00000553719 BIN3Q9NQY0 253 aa12.93□□□□□ -0.34
PSEN1-208ENST00000553719 NAGKQ9UJ70 344 aa12.93□□□□□ -0.34
PSEN1-208ENST00000553719 IGHV3-16A0A0C4DH30 117 aa12.92□□□□□ -0.34
PSEN1-208ENST00000553719 A0A0J9YWU9 116 aa12.92□□□□□ -0.34
PSEN1-208ENST00000553719 DNLZQ5SXM8 178 aa12.92□□□□□ -0.34
PSEN1-208ENST00000553719 FAM231DQ6ZW35 169 aa12.92□□□□□ -0.34
PSEN1-208ENST00000553719 DYNC2H1Q8NCM8 4307 aaKnown RBP12.91□□□□□ -0.34
PSEN1-208ENST00000553719 TRGV11A0A075B6L2 103 aa12.91□□□□□ -0.34
PSEN1-208ENST00000553719 TMEM189A5PLL7 270 aa12.91□□□□□ -0.34
PSEN1-208ENST00000553719 DEFB4AO15263 64 aa12.91□□□□□ -0.34
PSEN1-208ENST00000553719 GNRH2O43555 120 aa12.91□□□□□ -0.34
PSEN1-208ENST00000553719 MDFICQ9P1T7 246 aa12.91□□□□□ -0.34
PSEN1-208ENST00000553719 B4DEV8 164 aa12.9□□□□□ -0.34
PSEN1-208ENST00000553719 M0R036 132 aa12.9□□□□□ -0.34
PSEN1-208ENST00000553719 ORM1P02763 201 aa12.9□□□□□ -0.34
PSEN1-208ENST00000553719 CXCL1P09341 107 aa12.9□□□□□ -0.34
PSEN1-208ENST00000553719 TCL1AP56279 114 aa12.9□□□□□ -0.34
PSEN1-208ENST00000553719 RPL19P84098 196 aaKnown RBP12.9□□□□□ -0.34
PSEN1-208ENST00000553719 NUDT10Q8NFP7 164 aa12.9□□□□□ -0.34
PSEN1-208ENST00000553719 ISOC2Q96AB3 205 aa12.9□□□□□ -0.34
PSEN1-208ENST00000553719 NUDT11Q96G61 164 aa12.9□□□□□ -0.34
PSEN1-208ENST00000553719 RNASE7Q9H1E1 156 aaKnown RBP12.9□□□□□ -0.34
PSEN1-208ENST00000553719 RNASE3P12724 160 aaKnown RBP12.89□□□□□ -0.35
PSEN1-208ENST00000553719 DAZ2Q13117 558 aaKnown RBP12.89□□□□□ -0.35
PSEN1-208ENST00000553719 C10orf91Q5T1B1 145 aa12.89□□□□□ -0.35
PSEN1-208ENST00000553719 C9orf85Q96MD7 179 aa12.89□□□□□ -0.35
PSEN1-208ENST00000553719 SEC11CQ9BY50 192 aa12.89□□□□□ -0.35
PSEN1-208ENST00000553719 GSN-AS1Q9NRJ2 163 aa12.89□□□□□ -0.35
PSEN1-208ENST00000553719 CELA1Q9UNI1 258 aa12.89□□□□□ -0.35
PSEN1-208ENST00000553719 P01737 135 aa12.88□□□□□ -0.35
PSEN1-208ENST00000553719 ZNF415Q09FC8 603 aa12.88□□□□□ -0.35
PSEN1-208ENST00000553719 DKK2Q9UBU2 259 aa12.88□□□□□ -0.35
PSEN1-208ENST00000553719 ADIRFQ15847 76 aa12.87□□□□□ -0.35
PSEN1-208ENST00000553719 LINC00612Q8N6U2 182 aa12.87□□□□□ -0.35
PSEN1-208ENST00000553719 DAZAP1Q96EP5 407 aaKnown RBP12.87□□□□□ -0.35
PSEN1-208ENST00000553719 OSTCQ9NRP0 149 aa12.87□□□□□ -0.35
PSEN1-208ENST00000553719 TMSB15BA0A087X1C1 80 aa12.86□□□□□ -0.35
PSEN1-208ENST00000553719 LYRM9A8MSI8 78 aa12.86□□□□□ -0.35
PSEN1-208ENST00000553719 F8W036 122 aa12.86□□□□□ -0.35
PSEN1-208ENST00000553719 SPINK4O60575 86 aa12.86□□□□□ -0.35
PSEN1-208ENST00000553719 EMP1P54849 157 aa12.86□□□□□ -0.35
PSEN1-208ENST00000553719 FAM222AQ5U5X8 452 aa12.86□□□□□ -0.35
PSEN1-208ENST00000553719 RPP21Q9H633 154 aaKnown RBP12.86□□□□□ -0.35
PSEN1-208ENST00000553719 NOP10Q9NPE3 64 aaKnown RBP12.86□□□□□ -0.35
PSEN1-208ENST00000553719 SCRT2Q9NQ03 307 aa12.86□□□□□ -0.35
PSEN1-208ENST00000553719 IL36BQ9NZH7 164 aa12.86□□□□□ -0.35
PSEN1-208ENST00000553719 TIMM8BQ9Y5J9 83 aaPredicted RBP12.86□□□□□ -0.35
PSEN1-208ENST00000553719 MUC4Q99102 2169 aa12.86□□□□□ -0.35
PSEN1-208ENST00000553719 STARD9Q9P2P6 4700 aa12.86□□□□□ -0.35
PSEN1-208ENST00000553719 GRIFINA4D1Z8 144 aa12.85□□□□□ -0.35
PSEN1-208ENST00000553719 SNURFLB1AK76 121 aa12.85□□□□□ -0.35
PSEN1-208ENST00000553719 ASIPP42127 132 aa12.85□□□□□ -0.35
PSEN1-208ENST00000553719 PNRC1Q12796 327 aaPredicted RBP12.85□□□□□ -0.35
PSEN1-208ENST00000553719 CT83Q5H943 113 aa12.85□□□□□ -0.35
PSEN1-208ENST00000553719 OR2D3Q8NGH3 330 aa12.85□□□□□ -0.35
PSEN1-208ENST00000553719 SFRP2Q96HF1 295 aa12.85□□□□□ -0.35
PSEN1-208ENST00000553719 SPXQ9BT56 116 aa12.85□□□□□ -0.35
PSEN1-208ENST00000553719 CARHSP1Q9Y2V2 147 aaKnown RBP12.85□□□□□ -0.35
PSEN1-208ENST00000553719 CSMD3Q7Z407 3707 aa12.85□□□□□ -0.35
PSEN1-208ENST00000553719 IGLC6P0CF74 106 aa12.84□□□□□ -0.35
PSEN1-208ENST00000553719 MED14OSP0DP75 135 aa12.84□□□□□ -0.35
PSEN1-208ENST00000553719 ERVFC1-1P60608 527 aa12.84□□□□□ -0.35
PSEN1-208ENST00000553719 SLC7A5P1Q8MH63 180 aa12.84□□□□□ -0.35
PSEN1-208ENST00000553719 SSBP4Q9BWG4 385 aaPredicted RBP12.84□□□□□ -0.35
PSEN1-208ENST00000553719 V9GYV3 84 aa12.84□□□□□ -0.35
PSEN1-208ENST00000553719 TEX48A0A1B0GUV7 120 aa12.83□□□□□ -0.36
PSEN1-208ENST00000553719 H3BVH4 76 aa12.83□□□□□ -0.36
PSEN1-208ENST00000553719 SNAI2O43623 268 aa12.83□□□□□ -0.36
PSEN1-208ENST00000553719 GATCO43716 136 aaKnown RBP12.83□□□□□ -0.36
PSEN1-208ENST00000553719 SPART-AS1P0CW21 52 aa12.83□□□□□ -0.36
PSEN1-208ENST00000553719 RPS20P60866 119 aaKnown RBP12.83□□□□□ -0.36
PSEN1-208ENST00000553719 NDUFA5Q16718 116 aa12.83□□□□□ -0.36
PSEN1-208ENST00000553719 LGALS9BQ3B8N2 356 aa12.83□□□□□ -0.36
PSEN1-208ENST00000553719 PTH2Q96A98 100 aa12.83□□□□□ -0.36
PSEN1-208ENST00000553719 PLECQ15149 4684 aaKnown RBP12.82□□□□□ -0.36
PSEN1-208ENST00000553719 OR5AL1P0C617 328 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms