RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 TEX37Q96LM6 180 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 HIST1H2BNQ99877 126 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 HIST1H2BMQ99879 126 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 DPY30Q9C005 99 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 EFCAB1Q9HAE3 211 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 MRPL27Q9P0M9 148 aaKnown RBP1.54□□□□□ -2.16
SCFD1-210ENST00000553693 PSORS1C2Q9UIG4 136 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 ALMS1Q8TCU4 4167 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 UBR4Q5T4S7 5183 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 TRAV36DV7A0A075B6V5 113 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 A0A096LPI6 279 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 IGKV1D-43A0A0B4J1Z2 117 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 TRAV38-1A0A0B4J264 116 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 TRAV26-2A0A0B4J265 109 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 TRAV41A0A0B4J266 112 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 EXOC1LA0A1B0GW35 172 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 A0A1B0GWA3 101 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 hADV38S2A0JD32 116 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 A8MUN3 132 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 ZNF73O43830 326 aaPredicted RBP1.53□□□□□ -2.16
SCFD1-210ENST00000553693 OR2T1O43869 369 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 IGF2P01344 180 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 GYPAP02724 150 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 TFF1P04155 84 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 PRM2P04554 102 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 DBIP07108 87 aaKnown RBP1.53□□□□□ -2.16
SCFD1-210ENST00000553693 SULT1A3P0DMM9 295 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 SULT1A4P0DMN0 295 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 PPIBP23284 216 aaKnown RBP1.53□□□□□ -2.16
SCFD1-210ENST00000553693 ERP29P30040 261 aaKnown RBP1.53□□□□□ -2.16
SCFD1-210ENST00000553693 SRP9P49458 86 aaKnown RBP1.53□□□□□ -2.16
SCFD1-210ENST00000553693 DEFA1P59665 94 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 COPZ1P61923 177 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 RPL18Q07020 188 aaKnown RBP1.53□□□□□ -2.16
SCFD1-210ENST00000553693 OR8B8Q15620 311 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 NDUFA5Q16718 116 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 ZNF181Q2M3W8 571 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 IAH1Q2TAA2 248 aaPredicted RBP1.53□□□□□ -2.16
SCFD1-210ENST00000553693 LYRM7Q5U5X0 104 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 OR2T2Q6IF00 324 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 LYZL1Q6UWQ5 148 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 RPP25LQ8N5L8 163 aaKnown RBP1.53□□□□□ -2.16
SCFD1-210ENST00000553693 PXT1Q8NFP0 134 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 ISOC1Q96CN7 298 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 IMMP2LQ96T52 175 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 TTTY13Q9BZ97 58 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 OR2H1Q9GZK4 316 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 IL36BQ9NZH7 164 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 SAMHD1Q9Y3Z3 626 aaKnown RBP1.53□□□□□ -2.16
SCFD1-210ENST00000553693 DNAJC15Q9Y5T4 150 aa1.53□□□□□ -2.16
SCFD1-210ENST00000553693 HECTD4Q9Y4D8 3996 aa1.53□□□□□ -2.17
SCFD1-210ENST00000553693 DYNC1H1Q14204 4646 aaKnown RBP1.52□□□□□ -2.17
SCFD1-210ENST00000553693 H3BT86 120 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 LEPROTO15243 131 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 TPST1O60507 370 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 LY6G6CO95867 125 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 SERPINE1P05121 402 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 ZNF728P0DKX0 622 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 HLA-DMBP28068 263 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 SERPINB9P50453 376 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 CCL20P78556 96 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 ZNF90Q03938 601 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 LGALS9BQ3B8N2 356 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 IBA57Q5T440 356 aaKnown RBP1.52□□□□□ -2.17
SCFD1-210ENST00000553693 FAM27BQ5VT28 67 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 AADACL3Q5VUY0 350 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 TEX36Q5VZQ5 186 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 LGALS9CQ6DKI2 356 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 DPPA3Q6W0C5 159 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 ZNF826PQ6ZT77 177 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 S100A7AQ86SG5 101 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 TRAPPC6BQ86SZ2 158 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 LINC00471Q8N535 108 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 FAM216BQ8N7L0 139 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 OR8B12Q8NGG6 310 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 OR10X1Q8NGY0 326 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 TOMM6Q96B49 74 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 PPP3R2Q96LZ3 170 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 NIPSNAP1Q9BPW8 284 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 WFDC6Q9BQY6 131 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 SLC39A9Q9NUM3 307 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 UQCC1Q9NVA1 299 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 TVP23BQ9NYZ1 205 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 KAAG1Q9UBP8 84 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 ATPIF1Q9UII2 106 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 HHLA3Q9XRX5 114 aa1.52□□□□□ -2.17
SCFD1-210ENST00000553693 FAM236DA0A1B0GTK5 79 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 SDHAF1A6NFY7 115 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 IQCF6A8MYZ5 107 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 H3BQF6 201 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 J3QQQ9 107 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 M0R1W7 72 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 HMGB3O15347 200 aaKnown RBP1.51□□□□□ -2.17
SCFD1-210ENST00000553693 NDUFB3O43676 98 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 NDUFA2O43678 99 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 ATG12O94817 140 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 CST2P09228 141 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 SMIM17P0DL12 118 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 FAM236CP0DP71 79 aa1.51□□□□□ -2.17
SCFD1-210ENST00000553693 DNAJB13P59910 316 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms