RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 TMEM189A5PLL7 270 aa11.9□□□□□ -0.5
ACTN1-209ENST00000553659 A8MWP6 167 aa11.9□□□□□ -0.5
ACTN1-209ENST00000553659 DNLZQ5SXM8 178 aa11.9□□□□□ -0.5
ACTN1-209ENST00000553659 C9orf47Q6ZRZ4 202 aa11.9□□□□□ -0.5
ACTN1-209ENST00000553659 OR2K2Q8NGT1 345 aa11.9□□□□□ -0.5
ACTN1-209ENST00000553659 RHPN1-AS1Q9BWJ2 59 aa11.9□□□□□ -0.5
ACTN1-209ENST00000553659 PEMTQ9UBM1 199 aa11.9□□□□□ -0.5
ACTN1-209ENST00000553659 IGHV3OR16-13A0A075B7E8 117 aa11.89□□□□□ -0.51
ACTN1-209ENST00000553659 IGHV3-49A0A0A0MS15 119 aa11.89□□□□□ -0.51
ACTN1-209ENST00000553659 IGHV3-74A0A0B4J1X5 117 aa11.89□□□□□ -0.51
ACTN1-209ENST00000553659 SPINK4O60575 86 aa11.89□□□□□ -0.51
ACTN1-209ENST00000553659 ID1P41134 155 aa11.89□□□□□ -0.51
ACTN1-209ENST00000553659 ZNF138P52744 262 aa11.89□□□□□ -0.51
ACTN1-209ENST00000553659 TCF24Q7RTU0 167 aa11.89□□□□□ -0.51
ACTN1-209ENST00000553659 C12orf57Q99622 126 aa11.89□□□□□ -0.51
ACTN1-209ENST00000553659 VGLL1Q99990 258 aa11.89□□□□□ -0.51
ACTN1-209ENST00000553659 TRBV7-9A0A0J9YWB2 115 aa11.88□□□□□ -0.51
ACTN1-209ENST00000553659 FABP5P3A8MUU1 101 aa11.88□□□□□ -0.51
ACTN1-209ENST00000553659 SOCS3O14543 225 aa11.88□□□□□ -0.51
ACTN1-209ENST00000553659 SH2D1AO60880 128 aa11.88□□□□□ -0.51
ACTN1-209ENST00000553659 ESDP10768 282 aa11.88□□□□□ -0.51
ACTN1-209ENST00000553659 HIST1H1AQ02539 215 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-209ENST00000553659 GATD1Q8NB37 220 aa11.88□□□□□ -0.51
ACTN1-209ENST00000553659 GTSF1Q8WW33 167 aa11.88□□□□□ -0.51
ACTN1-209ENST00000553659 LINC00477Q96M19 166 aa11.88□□□□□ -0.51
ACTN1-209ENST00000553659 PACRGQ96M98 296 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-209ENST00000553659 C8orf49Q96NF6 230 aa11.88□□□□□ -0.51
ACTN1-209ENST00000553659 RETNQ9HD89 108 aa11.88□□□□□ -0.51
ACTN1-209ENST00000553659 A0A1B0GUT8 65 aa11.87□□□□□ -0.51
ACTN1-209ENST00000553659 ZNF705FA8MVS1 300 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-209ENST00000553659 HLA-DMBP28068 263 aa11.87□□□□□ -0.51
ACTN1-209ENST00000553659 CRIP1P50238 77 aa11.87□□□□□ -0.51
ACTN1-209ENST00000553659 PAFAH1B2P68402 229 aa11.87□□□□□ -0.51
ACTN1-209ENST00000553659 ZNF738Q8NE65 137 aa11.87□□□□□ -0.51
ACTN1-209ENST00000553659 OR10J6PQ8NGY7 276 aa11.87□□□□□ -0.51
ACTN1-209ENST00000553659 PGLYRP4Q96LB8 373 aa11.87□□□□□ -0.51
ACTN1-209ENST00000553659 HIST1H2BLQ99880 126 aa11.87□□□□□ -0.51
ACTN1-209ENST00000553659 IFITM10A6NMD0 228 aa11.86□□□□□ -0.51
ACTN1-209ENST00000553659 FABP4P15090 132 aa11.86□□□□□ -0.51
ACTN1-209ENST00000553659 CD300EQ496F6 205 aaPredicted RBP11.86□□□□□ -0.51
ACTN1-209ENST00000553659 GFI1BQ5VTD9 330 aa11.86□□□□□ -0.51
ACTN1-209ENST00000553659 IGFL4Q6B9Z1 124 aa11.86□□□□□ -0.51
ACTN1-209ENST00000553659 BAGE3Q86Y29 109 aa11.86□□□□□ -0.51
ACTN1-209ENST00000553659 RNF182Q8N6D2 247 aa11.86□□□□□ -0.51
ACTN1-209ENST00000553659 FAM110AQ9BQ89 295 aa11.86□□□□□ -0.51
ACTN1-209ENST00000553659 HYDINQ4G0P3 5121 aa11.85□□□□□ -0.51
ACTN1-209ENST00000553659 RBMY1BA6NDE4 496 aaKnown RBP11.85□□□□□ -0.51
ACTN1-209ENST00000553659 RBMY1EA6NEQ0 496 aaKnown RBP11.85□□□□□ -0.51
ACTN1-209ENST00000553659 PRAC2D3DTV9 90 aa11.85□□□□□ -0.51
ACTN1-209ENST00000553659 RBMY1DP0C7P1 496 aaKnown RBP11.85□□□□□ -0.51
ACTN1-209ENST00000553659 RPL11P62913 178 aaKnown RBP11.85□□□□□ -0.51
ACTN1-209ENST00000553659 LINC01559Q495D7 138 aa11.85□□□□□ -0.51
ACTN1-209ENST00000553659 TM4SF20Q53R12 229 aa11.85□□□□□ -0.51
ACTN1-209ENST00000553659 PDZD11Q5EBL8 140 aa11.85□□□□□ -0.51
ACTN1-209ENST00000553659 DMRTA1Q5VZB9 504 aa11.85□□□□□ -0.51
ACTN1-209ENST00000553659 OR10D4PQ8NGN7 298 aa11.85□□□□□ -0.51
ACTN1-209ENST00000553659 Q8TAT8 98 aa11.85□□□□□ -0.51
ACTN1-209ENST00000553659 AGPAT4-IT1Q9H0P7 198 aa11.85□□□□□ -0.51
ACTN1-209ENST00000553659 AMBPP02760 352 aa11.84□□□□□ -0.51
ACTN1-209ENST00000553659 CD7P09564 240 aa11.84□□□□□ -0.51
ACTN1-209ENST00000553659 CAMPP49913 170 aa11.84□□□□□ -0.51
ACTN1-209ENST00000553659 DEFB114Q30KQ6 69 aa11.84□□□□□ -0.51
ACTN1-209ENST00000553659 DEFB125Q8N687 156 aa11.84□□□□□ -0.51
ACTN1-209ENST00000553659 TMEM213A2RRL7 107 aa11.83□□□□□ -0.52
ACTN1-209ENST00000553659 OR11H12B2RN74 326 aa11.83□□□□□ -0.52
ACTN1-209ENST00000553659 SRIP30626 198 aa11.83□□□□□ -0.52
ACTN1-209ENST00000553659 S100A12P80511 92 aa11.83□□□□□ -0.52
ACTN1-209ENST00000553659 ERCC8Q13216 396 aa11.83□□□□□ -0.52
ACTN1-209ENST00000553659 DYNLRB2Q8TF09 96 aa11.83□□□□□ -0.52
ACTN1-209ENST00000553659 GRIFINA4D1Z8 144 aa11.82□□□□□ -0.52
ACTN1-209ENST00000553659 F2Z2F3 143 aa11.82□□□□□ -0.52
ACTN1-209ENST00000553659 CTRLP40313 264 aa11.82□□□□□ -0.52
ACTN1-209ENST00000553659 SLAQ13239 276 aa11.82□□□□□ -0.52
ACTN1-209ENST00000553659 C2orf70A6NJV1 201 aa11.81□□□□□ -0.52
ACTN1-209ENST00000553659 GDF5OSQ5U4N7 250 aa11.81□□□□□ -0.52
ACTN1-209ENST00000553659 ZNF493Q6ZR52 646 aa11.81□□□□□ -0.52
ACTN1-209ENST00000553659 FER1L6-AS1Q8NA97 138 aa11.81□□□□□ -0.52
ACTN1-209ENST00000553659 WFDC10AQ9H1F0 79 aa11.81□□□□□ -0.52
ACTN1-209ENST00000553659 TRAV2A0A0B4J234 112 aa11.8□□□□□ -0.52
ACTN1-209ENST00000553659 ORM1P02763 201 aa11.8□□□□□ -0.52
ACTN1-209ENST00000553659 IGLC6P0CF74 106 aa11.8□□□□□ -0.52
ACTN1-209ENST00000553659 GZMBP10144 247 aa11.8□□□□□ -0.52
ACTN1-209ENST00000553659 SNRPD3P62318 126 aaKnown RBP11.8□□□□□ -0.52
ACTN1-209ENST00000553659 OR8A1Q8NGG7 326 aa11.8□□□□□ -0.52
ACTN1-209ENST00000553659 KCNS1Q96KK3 526 aa11.8□□□□□ -0.52
ACTN1-209ENST00000553659 C20orf173Q96LM9 149 aa11.8□□□□□ -0.52
ACTN1-209ENST00000553659 ALKBH7Q9BT30 221 aaPredicted RBP11.8□□□□□ -0.52
ACTN1-209ENST00000553659 TRAV21A0A0B4J279 112 aa11.79□□□□□ -0.52
ACTN1-209ENST00000553659 SERF1AO75920 110 aa11.79□□□□□ -0.52
ACTN1-209ENST00000553659 ARMS2P0C7Q2 107 aa11.79□□□□□ -0.52
ACTN1-209ENST00000553659 EDN2P20800 178 aa11.79□□□□□ -0.52
ACTN1-209ENST00000553659 ZNF80P51504 273 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-209ENST00000553659 JOSD1Q15040 202 aaPredicted RBP11.79□□□□□ -0.52
ACTN1-209ENST00000553659 KIAA1644Q3SXP7 199 aa11.79□□□□□ -0.52
ACTN1-209ENST00000553659 ODF3Q96PU9 254 aa11.79□□□□□ -0.52
ACTN1-209ENST00000553659 CNFNQ9BYD5 112 aa11.79□□□□□ -0.52
ACTN1-209ENST00000553659 SAMD10Q9BYL1 202 aa11.79□□□□□ -0.52
ACTN1-209ENST00000553659 LOC102724200A0A096LPH7 203 aaPredicted RBP11.78□□□□□ -0.52
ACTN1-209ENST00000553659 PYY3Q5JQD4 70 aa11.78□□□□□ -0.52
ACTN1-209ENST00000553659 LYZL1Q6UWQ5 148 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms