RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 MSRB1Q9NZV6 116 aa9.85□□□□□ -0.83
SHMT2-205ENST00000553474 COX11Q9Y6N1 276 aa9.85□□□□□ -0.83
SHMT2-205ENST00000553474 ITPR3Q14573 2671 aa9.84□□□□□ -0.83
SHMT2-205ENST00000553474 IGHV3OR16-13A0A075B7E8 117 aa9.84□□□□□ -0.83
SHMT2-205ENST00000553474 IGHV3OR16-10A0A075B7F0 116 aa9.84□□□□□ -0.83
SHMT2-205ENST00000553474 IGHV3-74A0A0B4J1X5 117 aa9.84□□□□□ -0.83
SHMT2-205ENST00000553474 IGHV7-4-1A0A0J9YVY3 117 aa9.84□□□□□ -0.83
SHMT2-205ENST00000553474 H0Y8G0 127 aa9.84□□□□□ -0.83
SHMT2-205ENST00000553474 SOCS3O14543 225 aa9.84□□□□□ -0.83
SHMT2-205ENST00000553474 ZNF207O43670 478 aaKnown RBP9.84□□□□□ -0.83
SHMT2-205ENST00000553474 SLC25A16P16260 332 aa9.84□□□□□ -0.83
SHMT2-205ENST00000553474 Q96MF0 132 aa9.84□□□□□ -0.83
SHMT2-205ENST00000553474 TIMM8BQ9Y5J9 83 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-205ENST00000553474 TRAV21A0A0B4J279 112 aa9.83□□□□□ -0.84
SHMT2-205ENST00000553474 MUC21A0A0G2JKD1 596 aa9.83□□□□□ -0.84
SHMT2-205ENST00000553474 MUC21A0A140T8X8 626 aa9.83□□□□□ -0.84
SHMT2-205ENST00000553474 K7EMT4 169 aa9.83□□□□□ -0.84
SHMT2-205ENST00000553474 MUC21Q5SSG8 566 aa9.83□□□□□ -0.84
SHMT2-205ENST00000553474 APRG1Q8IVJ8 170 aa9.83□□□□□ -0.84
SHMT2-205ENST00000553474 Q8N8P6 123 aa9.83□□□□□ -0.84
SHMT2-205ENST00000553474 MRAP2Q96G30 205 aa9.83□□□□□ -0.84
SHMT2-205ENST00000553474 C11orf21Q9P2W6 132 aa9.83□□□□□ -0.84
SHMT2-205ENST00000553474 SMPXQ9UHP9 88 aa9.83□□□□□ -0.84
SHMT2-205ENST00000553474 CR1P17927 2039 aa9.83□□□□□ -0.84
SHMT2-205ENST00000553474 TMEM89A2RUT3 159 aa9.83□□□□□ -0.84
SHMT2-205ENST00000553474 SIVA1O15304 175 aa9.83□□□□□ -0.84
SHMT2-205ENST00000553474 WFDC11Q8NEX6 87 aa9.83□□□□□ -0.84
SHMT2-205ENST00000553474 DAZ1Q9NQZ3 744 aaKnown RBP9.83□□□□□ -0.84
SHMT2-205ENST00000553474 CREBBPQ92793 2442 aa9.82□□□□□ -0.84
SHMT2-205ENST00000553474 IGHV3-49A0A0A0MS15 119 aa9.82□□□□□ -0.84
SHMT2-205ENST00000553474 SMKR1H3BMG3 65 aa9.82□□□□□ -0.84
SHMT2-205ENST00000553474 K7EMI3 77 aa9.82□□□□□ -0.84
SHMT2-205ENST00000553474 NCR2O95944 276 aa9.82□□□□□ -0.84
SHMT2-205ENST00000553474 NUDT3O95989 172 aa9.82□□□□□ -0.84
SHMT2-205ENST00000553474 MPV17L2Q567V2 206 aa9.82□□□□□ -0.84
SHMT2-205ENST00000553474 BVES-AS1Q5T3Y7 98 aa9.82□□□□□ -0.84
SHMT2-205ENST00000553474 SPANXN1Q5VSR9 72 aa9.82□□□□□ -0.84
SHMT2-205ENST00000553474 UNQ9165/PRO28630Q6UXU0 137 aa9.82□□□□□ -0.84
SHMT2-205ENST00000553474 GPHB5Q86YW7 130 aa9.82□□□□□ -0.84
SHMT2-205ENST00000553474 KRTAP1-3Q8IUG1 177 aa9.82□□□□□ -0.84
SHMT2-205ENST00000553474 OR4X2Q8NGF9 303 aa9.82□□□□□ -0.84
SHMT2-205ENST00000553474 OR9G4Q8NGQ1 327 aa9.82□□□□□ -0.84
SHMT2-205ENST00000553474 FOXC2Q99958 501 aa9.82□□□□□ -0.84
SHMT2-205ENST00000553474 LINC00527Q9UJ94 153 aa9.82□□□□□ -0.84
SHMT2-205ENST00000553474 FLNAP21333 2647 aaKnown RBP9.81□□□□□ -0.84
SHMT2-205ENST00000553474 RNF223E7ERA6 249 aa9.81□□□□□ -0.84
SHMT2-205ENST00000553474 SMAD7O15105 426 aaKnown RBP9.81□□□□□ -0.84
SHMT2-205ENST00000553474 NPSP0C0P6 89 aa9.81□□□□□ -0.84
SHMT2-205ENST00000553474 PF4V1P10720 104 aa9.81□□□□□ -0.84
SHMT2-205ENST00000553474 CFHR3Q02985 330 aa9.81□□□□□ -0.84
SHMT2-205ENST00000553474 LY6EQ16553 131 aa9.81□□□□□ -0.84
SHMT2-205ENST00000553474 MAPK1IP1LQ8NDC0 245 aa9.81□□□□□ -0.84
SHMT2-205ENST00000553474 OR2K2Q8NGT1 345 aa9.81□□□□□ -0.84
SHMT2-205ENST00000553474 FAM19A4Q96LR4 140 aa9.81□□□□□ -0.84
SHMT2-205ENST00000553474 J3QLI3 93 aa9.8□□□□□ -0.84
SHMT2-205ENST00000553474 ATP5LO75964 103 aa9.8□□□□□ -0.84
SHMT2-205ENST00000553474 SEC11AP67812 179 aa9.8□□□□□ -0.84
SHMT2-205ENST00000553474 ZFAND2AQ8N6M9 145 aa9.8□□□□□ -0.84
SHMT2-205ENST00000553474 VPS13CQ709C8 3753 aa9.8□□□□□ -0.84
SHMT2-205ENST00000553474 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.8□□□□□ -0.842e-7■■■■□ 26
SHMT2-205ENST00000553474 IGLV2-18A0A075B6J9 118 aa9.8□□□□□ -0.84
SHMT2-205ENST00000553474 TRBV12-3P01733 135 aa9.8□□□□□ -0.84
SHMT2-205ENST00000553474 EVI2AP22794 236 aa9.8□□□□□ -0.84
SHMT2-205ENST00000553474 LEPP41159 167 aa9.8□□□□□ -0.84
SHMT2-205ENST00000553474 FOXE3Q13461 319 aa9.8□□□□□ -0.84
SHMT2-205ENST00000553474 KIR3DS1Q14943 382 aa9.8□□□□□ -0.84
SHMT2-205ENST00000553474 BOD1L2Q8IYS8 172 aa9.8□□□□□ -0.84
SHMT2-205ENST00000553474 C20orf173Q96LM9 149 aa9.8□□□□□ -0.84
SHMT2-205ENST00000553474 MCRIP2Q9BUT9 160 aaKnown RBP9.8□□□□□ -0.84
SHMT2-205ENST00000553474 ZMAT4Q9H898 229 aa9.8□□□□□ -0.84
SHMT2-205ENST00000553474 CYSRT1A8MQ03 144 aa9.79□□□□□ -0.84
SHMT2-205ENST00000553474 CD5LO43866 347 aa9.79□□□□□ -0.84
SHMT2-205ENST00000553474 PPP1R17O96001 155 aa9.79□□□□□ -0.84
SHMT2-205ENST00000553474 UBE2V1Q13404 147 aa9.79□□□□□ -0.84
SHMT2-205ENST00000553474 PEF1Q9UBV8 284 aaKnown RBP9.79□□□□□ -0.84
SHMT2-205ENST00000553474 TEX15Q9BXT5 2789 aa9.79□□□□□ -0.84
SHMT2-205ENST00000553474 FGF6P10767 208 aa9.78□□□□□ -0.84
SHMT2-205ENST00000553474 ID1P41134 155 aa9.78□□□□□ -0.84
SHMT2-205ENST00000553474 ASIPP42127 132 aa9.78□□□□□ -0.84
SHMT2-205ENST00000553474 CDKN1BP46527 198 aa9.78□□□□□ -0.84
SHMT2-205ENST00000553474 BLCAPP62952 87 aa9.78□□□□□ -0.84
SHMT2-205ENST00000553474 LAGE3Q14657 143 aa9.78□□□□□ -0.84
SHMT2-205ENST00000553474 C2orf91Q6ZV80 131 aa9.78□□□□□ -0.84
SHMT2-205ENST00000553474 NRACQ8N912 160 aa9.78□□□□□ -0.84
SHMT2-205ENST00000553474 RHPN1-AS1Q9BWJ2 59 aa9.78□□□□□ -0.84
SHMT2-205ENST00000553474 LINC01356Q8N9X3 169 aa9.78□□□□□ -0.84
SHMT2-205ENST00000553474 C20orf78Q9BR46 151 aa9.78□□□□□ -0.84
SHMT2-205ENST00000553474 KLK15Q9H2R5 256 aa9.78□□□□□ -0.84
SHMT2-205ENST00000553474 UFC1Q9Y3C8 167 aa9.78□□□□□ -0.84
SHMT2-205ENST00000553474 H3BVH4 76 aa9.77□□□□□ -0.85
SHMT2-205ENST00000553474 M0R381 172 aa9.77□□□□□ -0.85
SHMT2-205ENST00000553474 HLA-DRB4P13762 266 aa9.77□□□□□ -0.85
SHMT2-205ENST00000553474 PSMB8P28062 276 aa9.77□□□□□ -0.85
SHMT2-205ENST00000553474 PTTG1IPP53801 180 aa9.77□□□□□ -0.85
SHMT2-205ENST00000553474 PRR9Q5T870 116 aa9.77□□□□□ -0.85
SHMT2-205ENST00000553474 DPH3P1Q9H4G8 78 aa9.77□□□□□ -0.85
SHMT2-205ENST00000553474 HLA-DRB4X5D2U9 266 aa9.77□□□□□ -0.85
SHMT2-205ENST00000553474 IGHV3-11P01762 117 aa9.76□□□□□ -0.85
SHMT2-205ENST00000553474 S100A4P26447 101 aaKnown RBP9.76□□□□□ -0.85
SHMT2-205ENST00000553474 RPL11P62913 178 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms