RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 ZFP30Q9Y2G7 519 aa2.34□□□□□ -2.03
SCFD1-208ENST00000553278 MYH13Q9UKX3 1938 aa2.34□□□□□ -2.04
SCFD1-208ENST00000553278 TNRC6AQ8NDV7 1962 aaKnown RBP2.34□□□□□ -2.04
SCFD1-208ENST00000553278 MYO18AQ92614 2054 aaKnown RBP2.33□□□□□ -2.04
SCFD1-208ENST00000553278 FAM92AA1XBS5 289 aa2.33□□□□□ -2.04
SCFD1-208ENST00000553278 M0R129 80 aa2.33□□□□□ -2.04
SCFD1-208ENST00000553278 LINC00526Q96FQ7 95 aa2.33□□□□□ -2.04
SCFD1-208ENST00000553278 CCDC167Q9P0B6 97 aa2.33□□□□□ -2.04
SCFD1-208ENST00000553278 NINQ8N4C6 2090 aa2.33□□□□□ -2.04
SCFD1-208ENST00000553278 IBTKQ9P2D0 1353 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-208ENST00000553278 ERBINQ96RT1 1412 aa2.33□□□□□ -2.04
SCFD1-208ENST00000553278 A0A0G2JMM0 328 aa2.32□□□□□ -2.04
SCFD1-208ENST00000553278 A0A0J9YY99 117 aa2.32□□□□□ -2.04
SCFD1-208ENST00000553278 IGKV2-29A2NJV5 120 aaPredicted RBP2.32□□□□□ -2.04
SCFD1-208ENST00000553278 SCIMPQ6UWF3 145 aa2.32□□□□□ -2.04
SCFD1-208ENST00000553278 SLC25A26Q70HW3 274 aa2.32□□□□□ -2.04
SCFD1-208ENST00000553278 ANK1P16157 1881 aa2.32□□□□□ -2.04
SCFD1-208ENST00000553278 MYH6P13533 1939 aa2.32□□□□□ -2.04
SCFD1-208ENST00000553278 GRIN2AQ12879 1464 aa2.32□□□□□ -2.04
SCFD1-208ENST00000553278 A0A1B0GV90 55 aa2.31□□□□□ -2.04
SCFD1-208ENST00000553278 J3QLW9 94 aa2.31□□□□□ -2.04
SCFD1-208ENST00000553278 KLF7O75840 302 aaPredicted RBP2.31□□□□□ -2.04
SCFD1-208ENST00000553278 PYYP10082 97 aa2.31□□□□□ -2.04
SCFD1-208ENST00000553278 PSMG3Q9BT73 122 aaPredicted RBP2.31□□□□□ -2.04
SCFD1-208ENST00000553278 WFDC10AQ9H1F0 79 aa2.31□□□□□ -2.04
SCFD1-208ENST00000553278 WDR7Q9Y4E6 1490 aa2.31□□□□□ -2.04
SCFD1-208ENST00000553278 TRAV2A0A0B4J234 112 aa2.3□□□□□ -2.04
SCFD1-208ENST00000553278 SPCS2Q15005 226 aa2.3□□□□□ -2.04
SCFD1-208ENST00000553278 RHOHQ15669 191 aa2.3□□□□□ -2.04
SCFD1-208ENST00000553278 PLPP5Q8NEB5 264 aa2.3□□□□□ -2.04
SCFD1-208ENST00000553278 SDF2Q99470 211 aa2.3□□□□□ -2.04
SCFD1-208ENST00000553278 TMEM2Q9UHN6 1383 aa2.3□□□□□ -2.04
SCFD1-208ENST00000553278 PTPRGP23470 1445 aa2.3□□□□□ -2.04
SCFD1-208ENST00000553278 KIDINS220Q9ULH0 1771 aa2.3□□□□□ -2.04
SCFD1-208ENST00000553278 TRPM7Q96QT4 1865 aa2.3□□□□□ -2.04
SCFD1-208ENST00000553278 MCM3APO60318 1980 aa2.29□□□□□ -2.04
SCFD1-208ENST00000553278 MYOM3Q5VTT5 1437 aa2.29□□□□□ -2.04
SCFD1-208ENST00000553278 TRAV23DV6A0A075B6W5 121 aa2.29□□□□□ -2.04
SCFD1-208ENST00000553278 TMEM30CPA0ZSE6 113 aa2.29□□□□□ -2.04
SCFD1-208ENST00000553278 POLR2JP52435 117 aaKnown RBP2.29□□□□□ -2.04
SCFD1-208ENST00000553278 KCNRGQ8N5I3 272 aa2.29□□□□□ -2.04
SCFD1-208ENST00000553278 OBSCN-AS1Q96MR7 158 aa2.29□□□□□ -2.04
SCFD1-208ENST00000553278 LIMD2Q9BT23 127 aa2.29□□□□□ -2.04
SCFD1-208ENST00000553278 DLEU1O43261 78 aa2.28□□□□□ -2.04
SCFD1-208ENST00000553278 IGF2P01344 180 aa2.28□□□□□ -2.04
SCFD1-208ENST00000553278 SPATA45Q537H7 98 aa2.28□□□□□ -2.04
SCFD1-208ENST00000553278 UNQ5815/PRO19632Q6UWF5 114 aa2.28□□□□□ -2.04
SCFD1-208ENST00000553278 Q6ZUT4 128 aa2.28□□□□□ -2.04
SCFD1-208ENST00000553278 DYNLRB2Q8TF09 96 aa2.28□□□□□ -2.04
SCFD1-208ENST00000553278 ROCK2O75116 1388 aaKnown RBP2.27□□□□□ -2.05
SCFD1-208ENST00000553278 PTPRDP23468 1912 aa2.27□□□□□ -2.05
SCFD1-208ENST00000553278 TRAV17A0A0B4J275 112 aa2.27□□□□□ -2.05
SCFD1-208ENST00000553278 IL7P13232 177 aa2.27□□□□□ -2.05
SCFD1-208ENST00000553278 LINC01545Q5VT33 79 aa2.27□□□□□ -2.05
SCFD1-208ENST00000553278 MIC13Q5XKP0 118 aa2.27□□□□□ -2.05
SCFD1-208ENST00000553278 CSAG1Q6PB30 78 aa2.27□□□□□ -2.05
SCFD1-208ENST00000553278 C10orf105Q8TEF2 133 aa2.27□□□□□ -2.05
SCFD1-208ENST00000553278 PPDPFLQ8WWR9 84 aa2.27□□□□□ -2.05
SCFD1-208ENST00000553278 BOKQ9UMX3 212 aaPredicted RBP2.27□□□□□ -2.05
SCFD1-208ENST00000553278 EML5Q05BV3 1969 aa2.27□□□□□ -2.05
SCFD1-208ENST00000553278 IGLV3-1P01715 115 aa2.26□□□□□ -2.05
SCFD1-208ENST00000553278 IGHV3-30P01768 117 aa2.26□□□□□ -2.05
SCFD1-208ENST00000553278 GYPBP06028 91 aa2.26□□□□□ -2.05
SCFD1-208ENST00000553278 IGHV3-30-5P0DP03 117 aa2.26□□□□□ -2.05
SCFD1-208ENST00000553278 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
SCFD1-208ENST00000553278 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
SCFD1-208ENST00000553278 VSTM2AQ8TAG5 236 aa2.26□□□□□ -2.05
SCFD1-208ENST00000553278 C2orf88Q9BSF0 95 aa2.26□□□□□ -2.05
SCFD1-208ENST00000553278 CASP8AP2Q9UKL3 1982 aa2.26□□□□□ -2.05
SCFD1-208ENST00000553278 PDE6GP18545 87 aa2.25□□□□□ -2.05
SCFD1-208ENST00000553278 LYPD5Q6UWN5 251 aa2.25□□□□□ -2.05
SCFD1-208ENST00000553278 ADGRB1O14514 1584 aa2.24□□□□□ -2.05
SCFD1-208ENST00000553278 SORL1Q92673 2214 aa2.24□□□□□ -2.05
SCFD1-208ENST00000553278 NUPR2A6NF83 97 aa2.24□□□□□ -2.05
SCFD1-208ENST00000553278 LINC00587B1AMM8 73 aa2.24□□□□□ -2.05
SCFD1-208ENST00000553278 IGKCP01834 107 aa2.24□□□□□ -2.05
SCFD1-208ENST00000553278 APODP05090 189 aa2.24□□□□□ -2.05
SCFD1-208ENST00000553278 OCIAD2Q56VL3 154 aa2.24□□□□□ -2.05
SCFD1-208ENST00000553278 COPS9Q8WXC6 57 aa2.24□□□□□ -2.05
SCFD1-208ENST00000553278 DPH3Q96FX2 82 aa2.24□□□□□ -2.05
SCFD1-208ENST00000553278 MRPL36Q9P0J6 103 aaKnown RBP2.24□□□□□ -2.05
SCFD1-208ENST00000553278 NAIPQ13075 1403 aa2.24□□□□□ -2.05
SCFD1-208ENST00000553278 PHLPP1O60346 1717 aa2.23□□□□□ -2.05
SCFD1-208ENST00000553278 MYH7P12883 1935 aa2.23□□□□□ -2.05
SCFD1-208ENST00000553278 TRAV12-2A0A075B6T6 113 aa2.23□□□□□ -2.05
SCFD1-208ENST00000553278 PITX3O75364 302 aa2.23□□□□□ -2.05
SCFD1-208ENST00000553278 DMAC1Q96GE9 116 aa2.23□□□□□ -2.05
SCFD1-208ENST00000553278 PDCD10Q9BUL8 212 aa2.23□□□□□ -2.05
SCFD1-208ENST00000553278 MED13Q9UHV7 2174 aa2.23□□□□□ -2.05
SCFD1-208ENST00000553278 KIF13AQ9H1H9 1805 aa2.22□□□□□ -2.05
SCFD1-208ENST00000553278 LRP5O75197 1615 aa2.22□□□□□ -2.05
SCFD1-208ENST00000553278 IQCJQ1A5X6 159 aa2.22□□□□□ -2.05
SCFD1-208ENST00000553278 TMEM203Q969S6 136 aa2.22□□□□□ -2.05
SCFD1-208ENST00000553278 ATG5Q9H1Y0 275 aa2.22□□□□□ -2.05
SCFD1-208ENST00000553278 SMG6Q86US8 1419 aaKnown RBP2.22□□□□□ -2.05
SCFD1-208ENST00000553278 MYH9P35579 1960 aaKnown RBP2.21□□□□□ -2.05
SCFD1-208ENST00000553278 CCDC179H3BU77 68 aa2.21□□□□□ -2.06
SCFD1-208ENST00000553278 APOC1P02654 83 aa2.21□□□□□ -2.06
SCFD1-208ENST00000553278 MEIG1Q5JSS6 88 aa2.21□□□□□ -2.06
SCFD1-208ENST00000553278 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms