RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 IGHV4-4A0A075B6R2 117 aa10.54□□□□□ -0.72
RAB3IP-216ENST00000552199 SYS1-DBNDD2H3BUS1 97 aa10.54□□□□□ -0.72
RAB3IP-216ENST00000552199 NCR2O95944 276 aa10.54□□□□□ -0.72
RAB3IP-216ENST00000552199 NPYP01303 97 aa10.54□□□□□ -0.72
RAB3IP-216ENST00000552199 CACNG7P62955 275 aa10.54□□□□□ -0.72
RAB3IP-216ENST00000552199 HOXD3P31249 432 aaPredicted RBP10.54□□□□□ -0.72
RAB3IP-216ENST00000552199 RNASE4P34096 147 aaKnown RBP10.54□□□□□ -0.72
RAB3IP-216ENST00000552199 ATOH7Q8N100 152 aa10.54□□□□□ -0.72
RAB3IP-216ENST00000552199 TMEM86BQ8N661 226 aa10.54□□□□□ -0.72
RAB3IP-216ENST00000552199 MAP1LC3CQ9BXW4 147 aa10.53□□□□□ -0.72
RAB3IP-216ENST00000552199 FASNP49327 2511 aaKnown RBP10.53□□□□□ -0.72
RAB3IP-216ENST00000552199 H3BVH4 76 aa10.52□□□□□ -0.72
RAB3IP-216ENST00000552199 TCF21O43680 179 aa10.52□□□□□ -0.72
RAB3IP-216ENST00000552199 SPANXN1Q5VSR9 72 aa10.52□□□□□ -0.72
RAB3IP-216ENST00000552199 ZNF705AQ6ZN79 300 aaPredicted RBP10.52□□□□□ -0.72
RAB3IP-216ENST00000552199 SMIM15Q7Z3B0 74 aa10.52□□□□□ -0.72
RAB3IP-216ENST00000552199 KLHDC1Q8N7A1 406 aa10.52□□□□□ -0.72
RAB3IP-216ENST00000552199 LAMTOR2Q9Y2Q5 125 aa10.52□□□□□ -0.72
RAB3IP-216ENST00000552199 TRAV9-2A0A087WT02 112 aa10.52□□□□□ -0.73
RAB3IP-216ENST00000552199 NBPF19A0A087WUL8 3843 aa10.52□□□□□ -0.73
RAB3IP-216ENST00000552199 A0A096LNJ9 63 aa10.52□□□□□ -0.73
RAB3IP-216ENST00000552199 K7EQG2 157 aa10.52□□□□□ -0.73
RAB3IP-216ENST00000552199 EVI2AP22794 236 aa10.52□□□□□ -0.73
RAB3IP-216ENST00000552199 TFPI2P48307 235 aa10.52□□□□□ -0.73
RAB3IP-216ENST00000552199 KIR3DS1Q14943 382 aa10.52□□□□□ -0.73
RAB3IP-216ENST00000552199 ANXA2RQ3ZCQ2 193 aa10.52□□□□□ -0.73
RAB3IP-216ENST00000552199 PET117Q6UWS5 81 aa10.52□□□□□ -0.73
RAB3IP-216ENST00000552199 ITPR3Q14573 2671 aa10.52□□□□□ -0.73
RAB3IP-216ENST00000552199 C20orf202A1L168 122 aa10.51□□□□□ -0.73
RAB3IP-216ENST00000552199 GAS8-AS1O95177 125 aa10.51□□□□□ -0.73
RAB3IP-216ENST00000552199 MAJINQ3KP22 176 aa10.51□□□□□ -0.73
RAB3IP-216ENST00000552199 ZNF747Q9BV97 191 aa10.51□□□□□ -0.73
RAB3IP-216ENST00000552199 MAP1LC3AQ9H492 121 aa10.51□□□□□ -0.73
RAB3IP-216ENST00000552199 TIMM8BQ9Y5J9 83 aaPredicted RBP10.51□□□□□ -0.73
RAB3IP-216ENST00000552199 OR4C46A6NHA9 309 aa10.5□□□□□ -0.73
RAB3IP-216ENST00000552199 KLLNB2CW77 178 aa10.5□□□□□ -0.73
RAB3IP-216ENST00000552199 TNFRSF6BO95407 300 aa10.5□□□□□ -0.73
RAB3IP-216ENST00000552199 ZNF688P0C7X2 276 aa10.5□□□□□ -0.73
RAB3IP-216ENST00000552199 ASIPP42127 132 aa10.5□□□□□ -0.73
RAB3IP-216ENST00000552199 SNRPD3P62318 126 aaKnown RBP10.5□□□□□ -0.73
RAB3IP-216ENST00000552199 LBHQ53QV2 105 aaPredicted RBP10.5□□□□□ -0.73
RAB3IP-216ENST00000552199 PSMG4Q5JS54 123 aa10.5□□□□□ -0.73
RAB3IP-216ENST00000552199 C18orf65Q6ZTR6 163 aa10.5□□□□□ -0.73
RAB3IP-216ENST00000552199 IGLC3P0DOY3 106 aa10.5□□□□□ -0.73
RAB3IP-216ENST00000552199 MED14OSP0DP75 135 aa10.5□□□□□ -0.73
RAB3IP-216ENST00000552199 S100A4P26447 101 aaKnown RBP10.5□□□□□ -0.73
RAB3IP-216ENST00000552199 C2orf88Q9BSF0 95 aa10.5□□□□□ -0.73
RAB3IP-216ENST00000552199 LINC01546A6NGU7 62 aa10.49□□□□□ -0.73
RAB3IP-216ENST00000552199 GATA1P15976 413 aaPredicted RBP10.49□□□□□ -0.73
RAB3IP-216ENST00000552199 A0A0J9YX75 114 aa10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 M0R143 59 aa10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 EREGO14944 169 aa10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 GNRH2O43555 120 aa10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 SLURP1P55000 103 aa10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 TCTEX1D4Q5JR98 221 aa10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 ADAMTSL5Q6ZMM2 481 aa10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 ODF3Q96PU9 254 aa10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 SNHG12Q9BXW3 62 aa10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 SCRT2Q9NQ03 307 aa10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 UQCR10Q9UDW1 63 aa10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 ZNF469Q96JG9 3925 aaPredicted RBP10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 DNAJC9-AS1A6NH13 148 aa10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 LINC01619G3V211 115 aa10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 HBDP02042 147 aa10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 IGLL1P15814 213 aa10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 DEFB136Q30KP8 78 aa10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 LINC01545Q5VT33 79 aa10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 Q6ZSV7 163 aa10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 OR2K2Q8NGT1 345 aa10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 C4orf3Q8WVX3 66 aa10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 NXT2Q9NPJ8 142 aaKnown RBP10.48□□□□□ -0.73
RAB3IP-216ENST00000552199 LEPP41159 167 aa10.47□□□□□ -0.73
RAB3IP-216ENST00000552199 KRTAP1-1Q07627 177 aa10.47□□□□□ -0.73
RAB3IP-216ENST00000552199 MRPL52Q86TS9 123 aaKnown RBP10.47□□□□□ -0.73
RAB3IP-216ENST00000552199 WFDC12Q8WWY7 111 aa10.47□□□□□ -0.73
RAB3IP-216ENST00000552199 PHLDA3Q9Y5J5 127 aa10.47□□□□□ -0.73
RAB3IP-216ENST00000552199 PDZD2O15018 2839 aa10.47□□□□□ -0.73
RAB3IP-216ENST00000552199 PRSS47A8MTI9 375 aa10.46□□□□□ -0.73
RAB3IP-216ENST00000552199 H0Y8G0 127 aa10.46□□□□□ -0.73
RAB3IP-216ENST00000552199 M0R381 172 aa10.46□□□□□ -0.73
RAB3IP-216ENST00000552199 SPRY2O43597 315 aa10.46□□□□□ -0.73
RAB3IP-216ENST00000552199 RNASE3P12724 160 aaKnown RBP10.46□□□□□ -0.73
RAB3IP-216ENST00000552199 FXYD7P58549 80 aa10.46□□□□□ -0.73
RAB3IP-216ENST00000552199 NRACQ8N912 160 aa10.46□□□□□ -0.73
RAB3IP-216ENST00000552199 OR11H1Q8NG94 326 aa10.46□□□□□ -0.73
RAB3IP-216ENST00000552199 FOXC2Q99958 501 aa10.46□□□□□ -0.73
RAB3IP-216ENST00000552199 MCRIP2Q9BUT9 160 aaKnown RBP10.46□□□□□ -0.73
RAB3IP-216ENST00000552199 Q8N8P6 123 aa10.46□□□□□ -0.74
RAB3IP-216ENST00000552199 OR1N2Q8NGR9 330 aa10.46□□□□□ -0.74
RAB3IP-216ENST00000552199 DPF1Q92782 380 aa10.46□□□□□ -0.74
RAB3IP-216ENST00000552199 MRAP2Q96G30 205 aa10.46□□□□□ -0.74
RAB3IP-216ENST00000552199 IGLV2-18A0A075B6J9 118 aa10.45□□□□□ -0.74
RAB3IP-216ENST00000552199 TRAV26-2A0A0B4J265 109 aa10.45□□□□□ -0.74
RAB3IP-216ENST00000552199 C7orf71A4D174 169 aa10.45□□□□□ -0.74
RAB3IP-216ENST00000552199 CD5LO43866 347 aa10.45□□□□□ -0.74
RAB3IP-216ENST00000552199 FAM159AQ6UWV7 190 aa10.45□□□□□ -0.74
RAB3IP-216ENST00000552199 LURAP1LQ8IV03 231 aa10.45□□□□□ -0.74
RAB3IP-216ENST00000552199 DEFB125Q8N687 156 aa10.45□□□□□ -0.74
RAB3IP-216ENST00000552199 TRAV12-3A0A0B4J271 114 aa10.45□□□□□ -0.74
RAB3IP-216ENST00000552199 DUSP14O95147 198 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms