RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 IFNA7P01567 189 aa13.18□□□□□ -0.3
DDX54-208ENST00000551344 SMUG1Q53HV7 270 aa13.18□□□□□ -0.3
DDX54-208ENST00000551344 STOML3Q8TAV4 291 aa13.18□□□□□ -0.3
DDX54-208ENST00000551344 C8orf49Q96NF6 230 aa13.18□□□□□ -0.3
DDX54-208ENST00000551344 MAP1LC3BQ9GZQ8 125 aa13.18□□□□□ -0.3
DDX54-208ENST00000551344 PRO0255Q9UI72 69 aa13.18□□□□□ -0.3
DDX54-208ENST00000551344 KANTRA0A1W2PQU2 76 aa13.17□□□□□ -0.3
DDX54-208ENST00000551344 UMAD1C9J7I0 102 aa13.17□□□□□ -0.3
DDX54-208ENST00000551344 M0R2P5 195 aa13.17□□□□□ -0.3
DDX54-208ENST00000551344 PAX4O43316 350 aa13.17□□□□□ -0.3
DDX54-208ENST00000551344 GCGP01275 180 aa13.17□□□□□ -0.3
DDX54-208ENST00000551344 IGHV3-53P01767 116 aa13.17□□□□□ -0.3
DDX54-208ENST00000551344 TYMSP04818 313 aa13.17□□□□□ -0.3
DDX54-208ENST00000551344 PFN1P07737 140 aaKnown RBP13.17□□□□□ -0.3
DDX54-208ENST00000551344 PPT1P50897 306 aa13.17□□□□□ -0.3
DDX54-208ENST00000551344 UBE2G2P60604 165 aa13.17□□□□□ -0.3
DDX54-208ENST00000551344 FHL2Q14192 279 aa13.17□□□□□ -0.3
DDX54-208ENST00000551344 ESRGQ1W209 222 aa13.17□□□□□ -0.3
DDX54-208ENST00000551344 ZFP69Q49AA0 526 aa13.17□□□□□ -0.3
DDX54-208ENST00000551344 SOHLH1Q5JUK2 328 aa13.17□□□□□ -0.3
DDX54-208ENST00000551344 HIST1H2BAQ96A08 127 aa13.17□□□□□ -0.3
DDX54-208ENST00000551344 HHLA3Q9XRX5 114 aa13.17□□□□□ -0.3
DDX54-208ENST00000551344 A0A096LPF7 62 aa13.16□□□□□ -0.3
DDX54-208ENST00000551344 NBDYA0A0U1RRE5 68 aa13.16□□□□□ -0.3
DDX54-208ENST00000551344 BCL2L11O43521 198 aa13.16□□□□□ -0.3
DDX54-208ENST00000551344 ZNF80P51504 273 aaPredicted RBP13.16□□□□□ -0.3
DDX54-208ENST00000551344 EIF5AP63241 154 aaKnown RBP13.16□□□□□ -0.3
DDX54-208ENST00000551344 C1orf134Q5TEV5 83 aa13.16□□□□□ -0.3
DDX54-208ENST00000551344 LINC00479Q96M42 142 aa13.16□□□□□ -0.3
DDX54-208ENST00000551344 ZNF471Q9BX82 626 aaPredicted RBP13.16□□□□□ -0.3
DDX54-208ENST00000551344 Q9H8V8 135 aa13.16□□□□□ -0.3
DDX54-208ENST00000551344 PRSS29PA6NIE9 313 aa13.15□□□□□ -0.3
DDX54-208ENST00000551344 CRYBA4P53673 196 aa13.15□□□□□ -0.3
DDX54-208ENST00000551344 UPK3BQ9BT76 320 aa13.15□□□□□ -0.3
DDX54-208ENST00000551344 TRAV34A0A0B4J273 112 aa13.14□□□□□ -0.31
DDX54-208ENST00000551344 TRGV4A0A0C4DH28 118 aa13.14□□□□□ -0.31
DDX54-208ENST00000551344 PEX7O00628 323 aa13.14□□□□□ -0.31
DDX54-208ENST00000551344 FHITP49789 147 aa13.14□□□□□ -0.31
DDX54-208ENST00000551344 MBD3L1Q8WWY6 194 aa13.14□□□□□ -0.31
DDX54-208ENST00000551344 ZNF479Q96JC4 524 aa13.14□□□□□ -0.31
DDX54-208ENST00000551344 ICOSQ9Y6W8 199 aa13.14□□□□□ -0.31
DDX54-208ENST00000551344 TRAV4A0A0B4J268 109 aa13.13□□□□□ -0.31
DDX54-208ENST00000551344 DPPA3Q6W0C5 159 aa13.13□□□□□ -0.31
DDX54-208ENST00000551344 TMUB2Q71RG4 321 aa13.13□□□□□ -0.31
DDX54-208ENST00000551344 TCEAL7Q9BRU2 100 aa13.13□□□□□ -0.31
DDX54-208ENST00000551344 C11orf21Q9P2W6 132 aa13.13□□□□□ -0.31
DDX54-208ENST00000551344 MRPS16Q9Y3D3 137 aaKnown RBP13.13□□□□□ -0.31
DDX54-208ENST00000551344 ARL2-SNX15V9GYD0 113 aa13.13□□□□□ -0.31
DDX54-208ENST00000551344 FABP5P3A8MUU1 101 aa13.12□□□□□ -0.31
DDX54-208ENST00000551344 SFTA3P0C7M3 94 aa13.12□□□□□ -0.31
DDX54-208ENST00000551344 MRPL23Q16540 153 aaKnown RBP13.12□□□□□ -0.31
DDX54-208ENST00000551344 OR4C5Q8NGB2 326 aa13.12□□□□□ -0.31
DDX54-208ENST00000551344 SFT2D1Q8WV19 159 aa13.12□□□□□ -0.31
DDX54-208ENST00000551344 PFDN1O60925 122 aa13.11□□□□□ -0.31
DDX54-208ENST00000551344 CST9LP1Q5W188 147 aa13.11□□□□□ -0.31
DDX54-208ENST00000551344 FAM213BQ8TBF2 198 aa13.11□□□□□ -0.31
DDX54-208ENST00000551344 ZFP30Q9Y2G7 519 aa13.11□□□□□ -0.31
DDX54-208ENST00000551344 DNAH2Q9P225 4427 aa13.1□□□□□ -0.31
DDX54-208ENST00000551344 A0A1B0GVY2 172 aa13.1□□□□□ -0.31
DDX54-208ENST00000551344 TPT1P13693 172 aaKnown RBP13.1□□□□□ -0.31
DDX54-208ENST00000551344 LGALSLQ3ZCW2 172 aaPredicted RBP13.1□□□□□ -0.31
DDX54-208ENST00000551344 COX8CQ7Z4L0 72 aa13.1□□□□□ -0.31
DDX54-208ENST00000551344 FMC1Q96HJ9 113 aa13.1□□□□□ -0.31
DDX54-208ENST00000551344 CIDEAO60543 219 aa13.09□□□□□ -0.31
DDX54-208ENST00000551344 ORM1P02763 201 aa13.09□□□□□ -0.31
DDX54-208ENST00000551344 ZNF876PQ49A33 203 aa13.09□□□□□ -0.31
DDX54-208ENST00000551344 TTC32Q5I0X7 151 aa13.09□□□□□ -0.31
DDX54-208ENST00000551344 Q86TA4 180 aa13.09□□□□□ -0.31
DDX54-208ENST00000551344 TCTE3Q8IZS6 198 aa13.09□□□□□ -0.31
DDX54-208ENST00000551344 C6orf223Q8N319 242 aa13.09□□□□□ -0.31
DDX54-208ENST00000551344 PTH2Q96A98 100 aa13.09□□□□□ -0.31
DDX54-208ENST00000551344 C9orf85Q96MD7 179 aa13.09□□□□□ -0.31
DDX54-208ENST00000551344 TRBV6-1A0A0K0K1D8 114 aa13.08□□□□□ -0.32
DDX54-208ENST00000551344 A0A1W2PPQ1 181 aa13.08□□□□□ -0.32
DDX54-208ENST00000551344 PAGE4O60829 102 aa13.08□□□□□ -0.32
DDX54-208ENST00000551344 H2AFB1P0C5Y9 115 aa13.08□□□□□ -0.32
DDX54-208ENST00000551344 UBE2G1P62253 170 aa13.08□□□□□ -0.32
DDX54-208ENST00000551344 Q6ZNX1 250 aa13.08□□□□□ -0.32
DDX54-208ENST00000551344 NEGR1Q7Z3B1 354 aa13.08□□□□□ -0.32
DDX54-208ENST00000551344 IGKV3D-20A0A0C4DH25 116 aa13.07□□□□□ -0.32
DDX54-208ENST00000551344 C9JCJ5 164 aa13.07□□□□□ -0.32
DDX54-208ENST00000551344 K7EQD1 137 aa13.07□□□□□ -0.32
DDX54-208ENST00000551344 RNASE3P12724 160 aaKnown RBP13.07□□□□□ -0.32
DDX54-208ENST00000551344 LYPD5Q6UWN5 251 aa13.07□□□□□ -0.32
DDX54-208ENST00000551344 PCNPQ8WW12 178 aaKnown RBP13.07□□□□□ -0.32
DDX54-208ENST00000551344 FAT2Q9NYQ8 4349 aa13.06□□□□□ -0.32
DDX54-208ENST00000551344 GYPEP15421 78 aa13.06□□□□□ -0.32
DDX54-208ENST00000551344 SRIP30626 198 aa13.06□□□□□ -0.32
DDX54-208ENST00000551344 EIF5AL1Q6IS14 154 aaKnown RBP13.06□□□□□ -0.32
DDX54-208ENST00000551344 DNAH17Q9UFH2 4485 aa13.06□□□□□ -0.32
DDX54-208ENST00000551344 RS1O15537 224 aa13.05□□□□□ -0.32
DDX54-208ENST00000551344 S100A9P06702 114 aaKnown RBP13.05□□□□□ -0.32
DDX54-208ENST00000551344 BTF3P20290 206 aaKnown RBP13.05□□□□□ -0.32
DDX54-208ENST00000551344 S100A4P26447 101 aaKnown RBP13.05□□□□□ -0.32
DDX54-208ENST00000551344 CRIP1P50238 77 aa13.05□□□□□ -0.32
DDX54-208ENST00000551344 RAB5CP51148 216 aa13.05□□□□□ -0.32
DDX54-208ENST00000551344 ZC2HC1AQ96GY0 325 aa13.05□□□□□ -0.32
DDX54-208ENST00000551344 HECTD4Q9Y4D8 3996 aa13.05□□□□□ -0.32
DDX54-208ENST00000551344 PGPEP1LA6NFU8 196 aa13.04□□□□□ -0.32
DDX54-208ENST00000551344 SIVA1O15304 175 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms