RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 RBFOX3A6NFN3 312 aa12.2□□□□□ -0.46
RPAP3-207ENST00000551293 F6UZH7 168 aa12.2□□□□□ -0.46
RPAP3-207ENST00000551293 IGLV2-8P01709 118 aa12.2□□□□□ -0.46
RPAP3-207ENST00000551293 TYMSP04818 313 aa12.2□□□□□ -0.46
RPAP3-207ENST00000551293 PVALBP20472 110 aaPredicted RBP12.2□□□□□ -0.46
RPAP3-207ENST00000551293 DAZ4Q86SG3 579 aaKnown RBP12.2□□□□□ -0.46
RPAP3-207ENST00000551293 STX12Q86Y82 276 aa12.2□□□□□ -0.46
RPAP3-207ENST00000551293 CHAC2Q8WUX2 184 aa12.2□□□□□ -0.46
RPAP3-207ENST00000551293 PRADC1Q9BSG0 188 aa12.2□□□□□ -0.46
RPAP3-207ENST00000551293 CHAC1Q9BUX1 264 aa12.2□□□□□ -0.46
RPAP3-207ENST00000551293 DAZ3Q9NR90 486 aaKnown RBP12.2□□□□□ -0.46
RPAP3-207ENST00000551293 LYRM2Q9NU23 88 aaPredicted RBP12.2□□□□□ -0.46
RPAP3-207ENST00000551293 OR7C2O60412 319 aa12.19□□□□□ -0.46
RPAP3-207ENST00000551293 EIF3GO75821 320 aaKnown RBP eCLIP12.19□□□□□ -0.46
RPAP3-207ENST00000551293 HBG1P69891 147 aa12.19□□□□□ -0.46
RPAP3-207ENST00000551293 HBG2P69892 147 aa12.19□□□□□ -0.46
RPAP3-207ENST00000551293 DPPA3Q6W0C5 159 aa12.19□□□□□ -0.46
RPAP3-207ENST00000551293 DNAJC30Q96LL9 226 aa12.19□□□□□ -0.46
RPAP3-207ENST00000551293 SEC22CQ9BRL7 303 aa12.19□□□□□ -0.46
RPAP3-207ENST00000551293 RBAKDNA6NC62 111 aa12.18□□□□□ -0.46
RPAP3-207ENST00000551293 DIRC3C9JPN6 131 aa12.18□□□□□ -0.46
RPAP3-207ENST00000551293 RAB32Q13637 225 aa12.18□□□□□ -0.46
RPAP3-207ENST00000551293 LAGE3Q14657 143 aa12.18□□□□□ -0.46
RPAP3-207ENST00000551293 SPANXN2Q5MJ10 180 aa12.18□□□□□ -0.46
RPAP3-207ENST00000551293 ATP6V0E2Q8NHE4 81 aa12.18□□□□□ -0.46
RPAP3-207ENST00000551293 GTSF1LQ9H1H1 148 aa12.18□□□□□ -0.46
RPAP3-207ENST00000551293 RHOHQ15669 191 aa12.17□□□□□ -0.46
RPAP3-207ENST00000551293 TDRG1Q3Y452 100 aa12.17□□□□□ -0.46
RPAP3-207ENST00000551293 ZNF876PQ49A33 203 aa12.17□□□□□ -0.46
RPAP3-207ENST00000551293 CFAP126Q5VTH2 177 aa12.17□□□□□ -0.46
RPAP3-207ENST00000551293 C2orf50Q96LR7 162 aa12.17□□□□□ -0.46
RPAP3-207ENST00000551293 TRAV6A0A075B6T7 132 aa12.16□□□□□ -0.46
RPAP3-207ENST00000551293 CCDC160A6NGH7 325 aa12.16□□□□□ -0.46
RPAP3-207ENST00000551293 CENPXA8MT69 81 aa12.16□□□□□ -0.46
RPAP3-207ENST00000551293 HNRNPA3P51991 378 aaKnown RBP12.16□□□□□ -0.46
RPAP3-207ENST00000551293 UBE2L3P68036 154 aaKnown RBP12.16□□□□□ -0.46
RPAP3-207ENST00000551293 NHLH2Q02577 135 aa12.16□□□□□ -0.46
RPAP3-207ENST00000551293 ATP6V1FQ16864 119 aa12.16□□□□□ -0.46
RPAP3-207ENST00000551293 TRAV8-3A0A0A6YYJ7 113 aa12.15□□□□□ -0.46
RPAP3-207ENST00000551293 RS1O15537 224 aa12.15□□□□□ -0.46
RPAP3-207ENST00000551293 SDHCQ99643 169 aaPredicted RBP12.15□□□□□ -0.46
RPAP3-207ENST00000551293 SDF2L1Q9HCN8 221 aa12.15□□□□□ -0.46
RPAP3-207ENST00000551293 TRBV6-4A0A1B0GX49 114 aa12.14□□□□□ -0.47
RPAP3-207ENST00000551293 OR5C1Q8NGR4 320 aa12.14□□□□□ -0.47
RPAP3-207ENST00000551293 ASB13Q8WXK3 278 aa12.14□□□□□ -0.47
RPAP3-207ENST00000551293 TVP23CQ96ET8 276 aa12.14□□□□□ -0.47
RPAP3-207ENST00000551293 TRAV8-1A0A0A6YYK1 113 aa12.13□□□□□ -0.47
RPAP3-207ENST00000551293 TRAV21A0A0B4J279 112 aa12.13□□□□□ -0.47
RPAP3-207ENST00000551293 GAGE12JA6NER3 117 aa12.13□□□□□ -0.47
RPAP3-207ENST00000551293 GAGE1Q13065 139 aa12.13□□□□□ -0.47
RPAP3-207ENST00000551293 GAGE4Q13068 117 aa12.13□□□□□ -0.47
RPAP3-207ENST00000551293 GAGE5Q13069 117 aa12.13□□□□□ -0.47
RPAP3-207ENST00000551293 GAGE13Q4V321 117 aa12.13□□□□□ -0.47
RPAP3-207ENST00000551293 SGK494Q96LW2 274 aa12.13□□□□□ -0.47
RPAP3-207ENST00000551293 NMES1Q9C002 83 aa12.13□□□□□ -0.47
RPAP3-207ENST00000551293 BOLA1Q9Y3E2 137 aa12.13□□□□□ -0.47
RPAP3-207ENST00000551293 LENEPQ9Y5L5 61 aa12.13□□□□□ -0.47
RPAP3-207ENST00000551293 IGKV2D-24A0A075B6R9 120 aa12.12□□□□□ -0.47
RPAP3-207ENST00000551293 RPL37AP61513 92 aaKnown RBP12.12□□□□□ -0.47
RPAP3-207ENST00000551293 GOLT1AQ6ZVE7 132 aa12.12□□□□□ -0.47
RPAP3-207ENST00000551293 ATP5SQ99766 215 aa12.12□□□□□ -0.47
RPAP3-207ENST00000551293 TREM1Q9NP99 234 aa12.12□□□□□ -0.47
RPAP3-207ENST00000551293 Q9UF83 564 aa12.12□□□□□ -0.47
RPAP3-207ENST00000551293 RNF213Q63HN8 5207 aa12.12□□□□□ -0.47
RPAP3-207ENST00000551293 PGPA6NDG6 321 aa12.11□□□□□ -0.47
RPAP3-207ENST00000551293 GGTLC3B5MD39 225 aa12.11□□□□□ -0.47
RPAP3-207ENST00000551293 Q8N976 141 aa12.11□□□□□ -0.47
RPAP3-207ENST00000551293 DAZAP1Q96EP5 407 aaKnown RBP12.11□□□□□ -0.47
RPAP3-207ENST00000551293 C11orf21Q9P2W6 132 aa12.11□□□□□ -0.47
RPAP3-207ENST00000551293 RNF222A6NCQ9 220 aa12.1□□□□□ -0.47
RPAP3-207ENST00000551293 PGPEP1LA6NFU8 196 aa12.1□□□□□ -0.47
RPAP3-207ENST00000551293 GNG5P63218 68 aa12.1□□□□□ -0.47
RPAP3-207ENST00000551293 IL15RAQ13261 267 aa12.1□□□□□ -0.47
RPAP3-207ENST00000551293 TMEM75Q8N9X5 138 aa12.1□□□□□ -0.47
RPAP3-207ENST00000551293 CMTM2Q8TAZ6 248 aa12.1□□□□□ -0.47
RPAP3-207ENST00000551293 IL7P13232 177 aa12.09□□□□□ -0.47
RPAP3-207ENST00000551293 TOR2AQ5JU69 321 aa12.09□□□□□ -0.47
RPAP3-207ENST00000551293 ZNF506Q5JVG8 444 aa12.09□□□□□ -0.47
RPAP3-207ENST00000551293 TMED6Q8WW62 240 aa12.09□□□□□ -0.47
RPAP3-207ENST00000551293 KCNS1Q96KK3 526 aa12.09□□□□□ -0.47
RPAP3-207ENST00000551293 WDR61Q9GZS3 305 aaKnown RBP12.09□□□□□ -0.47
RPAP3-207ENST00000551293 PLA2G10O15496 165 aa12.08□□□□□ -0.48
RPAP3-207ENST00000551293 TCRBP04435 133 aa12.08□□□□□ -0.48
RPAP3-207ENST00000551293 ZNF80P51504 273 aaPredicted RBP12.08□□□□□ -0.48
RPAP3-207ENST00000551293 ASAH1Q13510 395 aa12.08□□□□□ -0.48
RPAP3-207ENST00000551293 ACOT6Q3I5F7 207 aaPredicted RBP12.08□□□□□ -0.48
RPAP3-207ENST00000551293 OR2T35Q8NGX2 323 aa12.08□□□□□ -0.48
RPAP3-207ENST00000551293 OTORQ9NRC9 128 aa12.08□□□□□ -0.48
RPAP3-207ENST00000551293 NUDT15Q9NV35 164 aa12.08□□□□□ -0.48
RPAP3-207ENST00000551293 KLK12Q9UKR0 248 aa12.08□□□□□ -0.48
RPAP3-207ENST00000551293 MGST1P10620 155 aaKnown RBP12.07□□□□□ -0.48
RPAP3-207ENST00000551293 CNPY1Q3B7I2 92 aa12.07□□□□□ -0.48
RPAP3-207ENST00000551293 FFAR4Q5NUL3 377 aa12.07□□□□□ -0.48
RPAP3-207ENST00000551293 SAMD10Q9BYL1 202 aa12.07□□□□□ -0.48
RPAP3-207ENST00000551293 MBD2Q9UBB5 411 aa12.07□□□□□ -0.48
RPAP3-207ENST00000551293 COX11Q9Y6N1 276 aa12.07□□□□□ -0.48
RPAP3-207ENST00000551293 LRRC37A5PQ49AS3 106 aa12.06□□□□□ -0.48
RPAP3-207ENST00000551293 KHDC3LQ587J8 217 aa12.06□□□□□ -0.48
RPAP3-207ENST00000551293 UBE2WQ96B02 151 aa12.06□□□□□ -0.48
RPAP3-207ENST00000551293 RMI2Q96E14 147 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms