RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 ATP6V0BQ99437 205 aa11.46□□□□□ -0.57
PDE1B-207ENST00000550620 SIRPDQ9H106 197 aa11.46□□□□□ -0.57
PDE1B-207ENST00000550620 OTOGLQ3ZCN5 2332 aa11.46□□□□□ -0.58
PDE1B-207ENST00000550620 C11orf71Q6IPW1 123 aa11.45□□□□□ -0.58
PDE1B-207ENST00000550620 PRADC1Q9BSG0 188 aa11.45□□□□□ -0.58
PDE1B-207ENST00000550620 MRPL16Q9NX20 251 aaKnown RBP11.45□□□□□ -0.58
PDE1B-207ENST00000550620 PGPEP1Q9NXJ5 209 aa11.45□□□□□ -0.58
PDE1B-207ENST00000550620 ZZEF1O43149 2961 aa11.45□□□□□ -0.58
PDE1B-207ENST00000550620 MED14OSP0DP75 135 aa11.45□□□□□ -0.58
PDE1B-207ENST00000550620 UBE2E1P51965 193 aa11.45□□□□□ -0.58
PDE1B-207ENST00000550620 ATP5G2Q06055 141 aa11.45□□□□□ -0.58
PDE1B-207ENST00000550620 PRR9Q5T870 116 aa11.45□□□□□ -0.58
PDE1B-207ENST00000550620 MORN3Q6PF18 240 aaPredicted RBP11.45□□□□□ -0.58
PDE1B-207ENST00000550620 SCGB1D4Q6XE38 83 aa11.45□□□□□ -0.58
PDE1B-207ENST00000550620 Q6ZQT7 251 aa11.45□□□□□ -0.58
PDE1B-207ENST00000550620 ATP6V0E2Q8NHE4 81 aa11.45□□□□□ -0.58
PDE1B-207ENST00000550620 DLX4Q92988 240 aaPredicted RBP11.45□□□□□ -0.58
PDE1B-207ENST00000550620 PHLDA3Q9Y5J5 127 aa11.45□□□□□ -0.58
PDE1B-207ENST00000550620 ZNF815PA8K554 130 aa11.44□□□□□ -0.58
PDE1B-207ENST00000550620 APOMO95445 188 aa11.44□□□□□ -0.58
PDE1B-207ENST00000550620 ZFP36P26651 326 aaKnown RBP11.44□□□□□ -0.58
PDE1B-207ENST00000550620 LYRM7Q5U5X0 104 aa11.44□□□□□ -0.58
PDE1B-207ENST00000550620 OR10J6PQ8NGY7 276 aa11.44□□□□□ -0.58
PDE1B-207ENST00000550620 ITLN2Q8WWU7 325 aaPredicted RBP11.44□□□□□ -0.58
PDE1B-207ENST00000550620 PRSS29PA6NIE9 313 aa11.44□□□□□ -0.58
PDE1B-207ENST00000550620 LINC01549A6NIU2 74 aa11.44□□□□□ -0.58
PDE1B-207ENST00000550620 G3V318 75 aa11.44□□□□□ -0.58
PDE1B-207ENST00000550620 OVOL1O14753 267 aa11.44□□□□□ -0.58
PDE1B-207ENST00000550620 SPOCK3Q9BQ16 436 aa11.44□□□□□ -0.58
PDE1B-207ENST00000550620 GLMPQ8WWB7 406 aa11.43□□□□□ -0.58
PDE1B-207ENST00000550620 RPL39LQ96EH5 51 aaKnown RBP11.43□□□□□ -0.58
PDE1B-207ENST00000550620 MGPP08493 103 aa11.43□□□□□ -0.58
PDE1B-207ENST00000550620 SRSF9Q13242 221 aaKnown RBP eCLIP11.43□□□□□ -0.58
PDE1B-207ENST00000550620 PAPPA-AS1Q5QFB9 102 aa11.43□□□□□ -0.58
PDE1B-207ENST00000550620 MTURNQ8N3F0 131 aa11.43□□□□□ -0.58
PDE1B-207ENST00000550620 C14orf178Q8N769 122 aaPredicted RBP11.43□□□□□ -0.58
PDE1B-207ENST00000550620 C1QTNF4Q9BXJ3 329 aa11.43□□□□□ -0.58
PDE1B-207ENST00000550620 HERVK_113P61574 105 aa11.42□□□□□ -0.58
PDE1B-207ENST00000550620 CLEC2AQ6UVW9 174 aa11.42□□□□□ -0.58
PDE1B-207ENST00000550620 ZFAND2AQ8N6M9 145 aa11.42□□□□□ -0.58
PDE1B-207ENST00000550620 IGHV1-69DA0A0B4J2H0 117 aa11.41□□□□□ -0.58
PDE1B-207ENST00000550620 FAM223BA6NKX1 122 aa11.41□□□□□ -0.58
PDE1B-207ENST00000550620 J3KRW8 73 aa11.41□□□□□ -0.58
PDE1B-207ENST00000550620 SAA4P35542 130 aa11.41□□□□□ -0.58
PDE1B-207ENST00000550620 CFAP126Q5VTH2 177 aa11.41□□□□□ -0.58
PDE1B-207ENST00000550620 FAM223AQ8IWN6 122 aa11.41□□□□□ -0.58
PDE1B-207ENST00000550620 BDP1A6H8Y1 2624 aa11.41□□□□□ -0.58
PDE1B-207ENST00000550620 CCL21O00585 134 aa11.41□□□□□ -0.58
PDE1B-207ENST00000550620 UBE2D1P51668 147 aa11.41□□□□□ -0.58
PDE1B-207ENST00000550620 FOXI1Q12951 378 aa11.41□□□□□ -0.58
PDE1B-207ENST00000550620 C20orf173Q96LM9 149 aa11.41□□□□□ -0.58
PDE1B-207ENST00000550620 COX6B1P14854 86 aa11.4□□□□□ -0.58
PDE1B-207ENST00000550620 TCTEX1D4Q5JR98 221 aa11.4□□□□□ -0.58
PDE1B-207ENST00000550620 AJUBAQ96IF1 538 aa11.4□□□□□ -0.58
PDE1B-207ENST00000550620 RNF223E7ERA6 249 aa11.4□□□□□ -0.59
PDE1B-207ENST00000550620 INSL3P51460 131 aa11.4□□□□□ -0.59
PDE1B-207ENST00000550620 ANXA2RQ3ZCQ2 193 aa11.4□□□□□ -0.59
PDE1B-207ENST00000550620 CEP250Q9BV73 2442 aa11.39□□□□□ -0.59
PDE1B-207ENST00000550620 LINC01548A6NM66 108 aa11.39□□□□□ -0.59
PDE1B-207ENST00000550620 TSPAN13O95857 204 aa11.39□□□□□ -0.59
PDE1B-207ENST00000550620 IGF1P05019 195 aa11.39□□□□□ -0.59
PDE1B-207ENST00000550620 C5orf56Q8N8D9 126 aa11.39□□□□□ -0.59
PDE1B-207ENST00000550620 CACNA1HO95180 2353 aa11.39□□□□□ -0.59
PDE1B-207ENST00000550620 LOC107984156A0A0G2JMH3 177 aa11.38□□□□□ -0.59
PDE1B-207ENST00000550620 ARL3P36405 182 aa11.38□□□□□ -0.59
PDE1B-207ENST00000550620 RPL32P62910 135 aaKnown RBP11.38□□□□□ -0.59
PDE1B-207ENST00000550620 LCNL1Q6ZST4 164 aa11.38□□□□□ -0.59
PDE1B-207ENST00000550620 ARL17AQ8IVW1 177 aa11.38□□□□□ -0.59
PDE1B-207ENST00000550620 POM121L12Q8N7R1 296 aa11.38□□□□□ -0.59
PDE1B-207ENST00000550620 PLEKHB2Q96CS7 222 aa11.38□□□□□ -0.59
PDE1B-207ENST00000550620 TRAV41A0A0B4J266 112 aa11.38□□□□□ -0.59
PDE1B-207ENST00000550620 K7ENP7 123 aa11.38□□□□□ -0.59
PDE1B-207ENST00000550620 PSMB2P49721 201 aa11.38□□□□□ -0.59
PDE1B-207ENST00000550620 EP300Q09472 2414 aaPredicted RBP11.38□□□□□ -0.59
PDE1B-207ENST00000550620 TRBV7-9A0A0J9YWB2 115 aa11.37□□□□□ -0.59
PDE1B-207ENST00000550620 UBE2D3P61077 147 aa11.37□□□□□ -0.59
PDE1B-207ENST00000550620 UBE2D2P62837 147 aa11.37□□□□□ -0.59
PDE1B-207ENST00000550620 APC2O95996 2303 aa11.37□□□□□ -0.59
PDE1B-207ENST00000550620 NDUFA4O00483 81 aa11.37□□□□□ -0.59
PDE1B-207ENST00000550620 SOCS3O14543 225 aa11.37□□□□□ -0.59
PDE1B-207ENST00000550620 GPHB5Q86YW7 130 aa11.37□□□□□ -0.59
PDE1B-207ENST00000550620 APRG1Q8IVJ8 170 aa11.37□□□□□ -0.59
PDE1B-207ENST00000550620 SYT8Q8NBV8 401 aa11.37□□□□□ -0.59
PDE1B-207ENST00000550620 FAM19A4Q96LR4 140 aa11.37□□□□□ -0.59
PDE1B-207ENST00000550620 VCX2Q9H322 139 aa11.37□□□□□ -0.59
PDE1B-207ENST00000550620 BSNQ9UPA5 3926 aa11.36□□□□□ -0.59
PDE1B-207ENST00000550620 PCNX1Q96RV3 2341 aa11.36□□□□□ -0.59
PDE1B-207ENST00000550620 TRBV20-1A0A075B6N2 111 aa11.36□□□□□ -0.59
PDE1B-207ENST00000550620 NPFFO15130 113 aa11.36□□□□□ -0.59
PDE1B-207ENST00000550620 SPRY2O43597 315 aa11.36□□□□□ -0.59
PDE1B-207ENST00000550620 DUSP14O95147 198 aaKnown RBP11.36□□□□□ -0.59
PDE1B-207ENST00000550620 CRYGDP07320 174 aa11.36□□□□□ -0.59
PDE1B-207ENST00000550620 CD7P09564 240 aa11.36□□□□□ -0.59
PDE1B-207ENST00000550620 RNASE4P34096 147 aaKnown RBP11.36□□□□□ -0.59
PDE1B-207ENST00000550620 SMCPP49901 116 aaPredicted RBP11.36□□□□□ -0.59
PDE1B-207ENST00000550620 CKS1BP61024 79 aa11.36□□□□□ -0.59
PDE1B-207ENST00000550620 PMVKQ15126 192 aa11.36□□□□□ -0.59
PDE1B-207ENST00000550620 TMEM141Q96I45 108 aa11.36□□□□□ -0.59
PDE1B-207ENST00000550620 TP53TG1Q9Y2A0 90 aa11.36□□□□□ -0.59
PDE1B-207ENST00000550620 MOB4Q9Y3A3 225 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms