RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 CLINT1Q14677 625 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 PSG3Q16557 428 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 C5orf47Q569G3 176 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 TMEM69Q5SWH9 247 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 EBLN2Q6P2I7 272 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 CD164L2Q6UWJ8 174 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 S100A7AQ86SG5 101 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 ZNF546Q86UE3 836 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 LHFPL1Q86WI0 220 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 TCTE3Q8IZS6 198 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 ARRDC1Q8N5I2 433 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 SLC35G3Q8N808 338 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 OR11H7Q8NGC8 314 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 OR51G1Q8NGK1 321 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 OR5H2Q8NGV7 314 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 OR52E5Q8NH55 327 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 GNPNAT1Q96EK6 184 aaPredicted RBP2.38□□□□□ -2.03
LIMA1-206ENST00000550611 VSIG2Q96IQ7 327 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 HYLS1Q96M11 299 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 TP53RKQ96S44 253 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 TMEM208Q9BTX3 173 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 FUNDC2Q9BWH2 189 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 MED9Q9NWA0 146 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 DOK5Q9P104 306 aa2.38□□□□□ -2.03
LIMA1-206ENST00000550611 IGLV7-46A0A075B6I9 117 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 TRAV26-1A0A087WT03 109 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 A0A096LPF7 62 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 TRAV8-2A0A0B4J237 113 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 C3orf85A0A1B0GTC6 90 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 FAM240BA0A1B0GVZ2 78 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 KRTAP16-1A8MUX0 517 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 DISC1C4P0D8 188 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 H3BMQ9 156 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 K7ERU9 68 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 M0R2Z0 102 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 UPK1BO75841 260 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 ATG12O94817 140 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 DUSP14O95147 198 aaKnown RBP2.37□□□□□ -2.03
LIMA1-206ENST00000550611 CDS2O95674 445 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 C1QBP02746 253 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 OR10J4P0C629 311 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 DNAH10OSP0CZ25 163 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 HLA-DMAP28067 261 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 S100GP29377 79 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 CNN1P51911 297 aaKnown RBP2.37□□□□□ -2.03
LIMA1-206ENST00000550611 FGF8P55075 233 aaPredicted RBP2.37□□□□□ -2.03
LIMA1-206ENST00000550611 AQP4P55087 323 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 CYCSP99999 105 aaKnown RBP2.37□□□□□ -2.03
LIMA1-206ENST00000550611 ZNF90Q03938 601 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 MXD1Q05195 221 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 SPINK13Q1W4C9 94 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 SP6Q3SY56 376 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 COX19Q49B96 90 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 NMSQ5H8A3 153 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 IDNKQ5T6J7 187 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 TEX261Q6UWH6 196 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 ZNF493Q6ZR52 646 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 CCDC71LQ8N9Z2 235 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 OR4C16Q8NGL9 310 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 FCGR1BQ92637 280 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 S100A16Q96FQ6 103 aaKnown RBP2.37□□□□□ -2.03
LIMA1-206ENST00000550611 SFRP2Q96HF1 295 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 TMEM70Q9BUB7 260 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 ARV1Q9H2C2 271 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 GEMIN7Q9H840 131 aaKnown RBP2.37□□□□□ -2.03
LIMA1-206ENST00000550611 ENY2Q9NPA8 101 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 NOP10Q9NPE3 64 aaKnown RBP2.37□□□□□ -2.03
LIMA1-206ENST00000550611 RPRMQ9NS64 109 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.37□□□□□ -2.03
LIMA1-206ENST00000550611 HSPB11Q9Y547 144 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 TIMM8BQ9Y5J9 83 aaPredicted RBP2.37□□□□□ -2.03
LIMA1-206ENST00000550611 URGCP-MRPS24S4R325 110 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 U3KQ87 197 aa2.37□□□□□ -2.03
LIMA1-206ENST00000550611 TRAV12-2A0A075B6T6 113 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 IGKV1OR2-108A0A075B7D4 117 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 A0A0J9YY99 117 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 LRCOL1A6NCL2 159 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 SNRPGP15A8MWD9 76 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 TEX46H3BTG2 121 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 SIVA1O15304 175 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 ADAP1O75689 374 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 INSP01308 110 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 IFNA5P01569 189 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 APOC3P02656 99 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 ANXA3P12429 323 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 PRSS3P35030 304 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 AKR1C3P42330 323 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 PIGPP57054 158 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 KRTAP10-4P60372 401 aaPredicted RBP2.36□□□□□ -2.03
LIMA1-206ENST00000550611 RPS20P60866 119 aaKnown RBP2.36□□□□□ -2.03
LIMA1-206ENST00000550611 OR5I1Q13606 314 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 VAMP3Q15836 100 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 AKR1C8PQ5T2L2 129 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 SAMD13Q5VXD3 122 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 Q6ZRG5 221 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 ACOT7LQ6ZUV0 252 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 BAP18Q8IXM2 172 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 OR8I2Q8N0Y5 310 aa2.36□□□□□ -2.03
LIMA1-206ENST00000550611 TMEM256Q8N2U0 113 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms