RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 DLEU1O43261 78 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 SNAI2O43623 268 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 TNFRSF6BO95407 300 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 PRSS1P07477 247 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 IGHV4-38-2P0DP08 117 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 FCER1GP30273 86 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 ZNF80P51504 273 aaPredicted RBP3.32□□□□□ -1.88
CCDC59-204ENST00000550589 ORMDL2Q53FV1 153 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 IGFL4Q6B9Z1 124 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 FAM159AQ6UWV7 190 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 PRSS57Q6UWY2 283 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 DEFB125Q8N687 156 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 OR9G4Q8NGQ1 327 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 ORAOV1Q8WV07 137 aa3.32□□□□□ -1.88
CCDC59-204ENST00000550589 SPTBN1Q01082 2364 aaKnown RBP3.32□□□□□ -1.88
CCDC59-204ENST00000550589 TRAV8-2A0A0B4J237 113 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 IGKV3D-20A0A0C4DH25 116 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 LINC01546A6NGU7 62 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 PRAC2D3DTV9 90 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 ZNF207O43670 478 aaKnown RBP3.31□□□□□ -1.88
CCDC59-204ENST00000550589 TGFAP01135 160 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 ELANEP08246 267 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 RNF224P0DH78 156 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 COX8AP10176 69 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 HLA-DMBP28068 263 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 HINT1P49773 126 aaPredicted RBP3.31□□□□□ -1.88
CCDC59-204ENST00000550589 SEC11AP67812 179 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 LOXL1Q08397 574 aaPredicted RBP3.31□□□□□ -1.88
CCDC59-204ENST00000550589 LAGE3Q14657 143 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 Q8N8P6 123 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 OR2K2Q8NGT1 345 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 AP1S3Q96PC3 154 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 C20orf78Q9BR46 151 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 TMEM208Q9BTX3 173 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 DPH3P1Q9H4G8 78 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 SCRT2Q9NQ03 307 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 LINC00527Q9UJ94 153 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 IGHV3-49A0A0A0MS15 119 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 A6NDN8 102 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 DUSP14O95147 198 aaKnown RBP3.31□□□□□ -1.88
CCDC59-204ENST00000550589 NUDT3O95989 172 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 NPYP01303 97 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 IGHV3-11P01762 117 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 PSMB8P28062 276 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 LEPP41159 167 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 BLCAPP62952 87 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 TMEM97Q5BJF2 176 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 LRRC75A-AS1Q8N1F1 130 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 BEX4Q9NWD9 120 aaPredicted RBP3.31□□□□□ -1.88
CCDC59-204ENST00000550589 WNK2Q9Y3S1 2297 aa3.31□□□□□ -1.88
CCDC59-204ENST00000550589 KALRNO60229 2985 aa3.3□□□□□ -1.88
CCDC59-204ENST00000550589 MUC21A0A0G2JKD1 596 aa3.3□□□□□ -1.88
CCDC59-204ENST00000550589 MUC21A0A140T8X8 626 aa3.3□□□□□ -1.88
CCDC59-204ENST00000550589 hDV102S1A0JD36 115 aa3.3□□□□□ -1.88
CCDC59-204ENST00000550589 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.3□□□□□ -1.88
CCDC59-204ENST00000550589 M0R381 172 aa3.3□□□□□ -1.88
CCDC59-204ENST00000550589 EVI2AP22794 236 aa3.3□□□□□ -1.88
CCDC59-204ENST00000550589 PTTG1IPP53801 180 aa3.3□□□□□ -1.88
CCDC59-204ENST00000550589 MAJINQ3KP22 176 aa3.3□□□□□ -1.88
CCDC59-204ENST00000550589 MUC21Q5SSG8 566 aa3.3□□□□□ -1.88
CCDC59-204ENST00000550589 UNQ9165/PRO28630Q6UXU0 137 aa3.3□□□□□ -1.88
CCDC59-204ENST00000550589 APRG1Q8IVJ8 170 aa3.3□□□□□ -1.88
CCDC59-204ENST00000550589 RNF185Q96GF1 192 aa3.3□□□□□ -1.88
CCDC59-204ENST00000550589 ODF3Q96PU9 254 aa3.3□□□□□ -1.88
CCDC59-204ENST00000550589 VPREB3Q9UKI3 123 aa3.3□□□□□ -1.88
CCDC59-204ENST00000550589 ATRXP46100 2492 aa3.3□□□□□ -1.88
CCDC59-204ENST00000550589 HIVEP3Q5T1R4 2406 aa3.3□□□□□ -1.88
CCDC59-204ENST00000550589 A1L4Q6 167 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 H3BVH4 76 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 LGALS9O00182 355 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 SOCS3O14543 225 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 CD5LO43866 347 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 DPM2O94777 84 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 IGKCP01834 107 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 PLNP26678 52 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 RNASE4P34096 147 aaKnown RBP3.29□□□□□ -1.88
CCDC59-204ENST00000550589 SUMO2P61956 95 aaKnown RBP3.29□□□□□ -1.88
CCDC59-204ENST00000550589 CFHR3Q02985 330 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 MPV17L2Q567V2 206 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 LINC00173Q6ZV60 143 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 UBE2E2Q96LR5 201 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 KLK15Q9H2R5 256 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 PEMTQ9UBM1 199 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 COX11Q9Y6N1 276 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 ARHGAP32A7KAX9 2087 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 SMKR1H3BMG3 65 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 NCR2O95944 276 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 SCGB2A2Q13296 93 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 VAMP3Q15836 100 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 DEFB112Q30KQ8 113 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 PAPPA-AS1Q5QFB9 102 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 ZFAND2AQ8N6M9 145 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 STPG4Q8N801 248 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 TMEM158Q8WZ71 300 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 KIR2DL4Q99706 377 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 MSRB1Q9NZV6 116 aa3.29□□□□□ -1.88
CCDC59-204ENST00000550589 IGKV3-7A0A075B6H7 116 aa3.28□□□□□ -1.88
CCDC59-204ENST00000550589 A0A096LNJ9 63 aa3.28□□□□□ -1.88
CCDC59-204ENST00000550589 TRAV12-1A0A0B4J245 112 aa3.28□□□□□ -1.88
CCDC59-204ENST00000550589 J3KRW8 73 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms