RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 IGLV2-18A0A075B6J9 118 aa9.54□□□□□ -0.88
NUP188-211ENST00000550219 IGLV2-8P01709 118 aa9.54□□□□□ -0.88
NUP188-211ENST00000550219 FAM74A3Q4VXF1 159 aa9.54□□□□□ -0.88
NUP188-211ENST00000550219 CENPWQ5EE01 88 aa9.54□□□□□ -0.88
NUP188-211ENST00000550219 PRR9Q5T870 116 aa9.54□□□□□ -0.88
NUP188-211ENST00000550219 C1orf158Q8N1D5 194 aa9.54□□□□□ -0.88
NUP188-211ENST00000550219 C8orf49Q96NF6 230 aa9.54□□□□□ -0.88
NUP188-211ENST00000550219 NIPSNAP3BQ9BS92 247 aa9.54□□□□□ -0.88
NUP188-211ENST00000550219 TMEM208Q9BTX3 173 aa9.54□□□□□ -0.88
NUP188-211ENST00000550219 DKK2Q9UBU2 259 aa9.54□□□□□ -0.88
NUP188-211ENST00000550219 HECTD4Q9Y4D8 3996 aa9.54□□□□□ -0.88
NUP188-211ENST00000550219 TEX48A0A1B0GUV7 120 aa9.53□□□□□ -0.88
NUP188-211ENST00000550219 RRN3P1Q2M238 152 aa9.53□□□□□ -0.88
NUP188-211ENST00000550219 SMUG1Q53HV7 270 aa9.53□□□□□ -0.88
NUP188-211ENST00000550219 GFI1BQ5VTD9 330 aa9.53□□□□□ -0.88
NUP188-211ENST00000550219 Q6AWC8 147 aa9.53□□□□□ -0.88
NUP188-211ENST00000550219 LINC00336Q6ZUF6 198 aa9.53□□□□□ -0.88
NUP188-211ENST00000550219 C20orf144Q9BQM9 153 aa9.53□□□□□ -0.88
NUP188-211ENST00000550219 LY96Q9Y6Y9 160 aa9.53□□□□□ -0.88
NUP188-211ENST00000550219 TRAV12-2A0A075B6T6 113 aa9.52□□□□□ -0.89
NUP188-211ENST00000550219 C7orf71A4D174 169 aa9.52□□□□□ -0.89
NUP188-211ENST00000550219 ZNF727A8MUV8 499 aa9.52□□□□□ -0.89
NUP188-211ENST00000550219 ZNF324O75467 553 aaPredicted RBP9.52□□□□□ -0.89
NUP188-211ENST00000550219 GPX1P07203 203 aa9.52□□□□□ -0.89
NUP188-211ENST00000550219 SFTA3P0C7M3 94 aa9.52□□□□□ -0.89
NUP188-211ENST00000550219 GNG4P50150 75 aa9.52□□□□□ -0.89
NUP188-211ENST00000550219 CEBPGP53567 150 aa9.52□□□□□ -0.89
NUP188-211ENST00000550219 DAD1P61803 113 aa9.52□□□□□ -0.89
NUP188-211ENST00000550219 ZNF674Q2M3X9 581 aa9.52□□□□□ -0.89
NUP188-211ENST00000550219 SOHLH1Q5JUK2 328 aa9.52□□□□□ -0.89
NUP188-211ENST00000550219 ZC2HC1AQ96GY0 325 aa9.52□□□□□ -0.89
NUP188-211ENST00000550219 SMIM7Q9BQ49 75 aa9.52□□□□□ -0.89
NUP188-211ENST00000550219 TMEM218A2RU14 115 aa9.51□□□□□ -0.89
NUP188-211ENST00000550219 PRSS29PA6NIE9 313 aa9.51□□□□□ -0.89
NUP188-211ENST00000550219 INSP01308 110 aa9.51□□□□□ -0.89
NUP188-211ENST00000550219 RNASE4P34096 147 aaKnown RBP9.51□□□□□ -0.89
NUP188-211ENST00000550219 CRIP1P50238 77 aa9.51□□□□□ -0.89
NUP188-211ENST00000550219 ZNF80P51504 273 aaPredicted RBP9.51□□□□□ -0.89
NUP188-211ENST00000550219 BTN1A1Q13410 526 aa9.51□□□□□ -0.89
NUP188-211ENST00000550219 NDUFA5Q16718 116 aa9.51□□□□□ -0.89
NUP188-211ENST00000550219 OCC1Q8TAD7 63 aa9.51□□□□□ -0.89
NUP188-211ENST00000550219 TRAV21A0A0B4J279 112 aa9.5□□□□□ -0.89
NUP188-211ENST00000550219 J3KRW8 73 aa9.5□□□□□ -0.89
NUP188-211ENST00000550219 GCGP01275 180 aa9.5□□□□□ -0.89
NUP188-211ENST00000550219 TMEM88Q6PEY1 159 aa9.5□□□□□ -0.89
NUP188-211ENST00000550219 NHLRC2Q8NBF2 726 aa9.5□□□□□ -0.89
NUP188-211ENST00000550219 HERC2O95714 4834 aa9.49□□□□□ -0.89
NUP188-211ENST00000550219 TRAV12-3A0A0B4J271 114 aa9.49□□□□□ -0.89
NUP188-211ENST00000550219 A0A1B0GVY2 172 aa9.49□□□□□ -0.89
NUP188-211ENST00000550219 PGPEP1LA6NFU8 196 aa9.49□□□□□ -0.89
NUP188-211ENST00000550219 ZNF705GA8MUZ8 300 aaPredicted RBP9.49□□□□□ -0.89
NUP188-211ENST00000550219 K7EN84 100 aa9.49□□□□□ -0.89
NUP188-211ENST00000550219 RTL8CO15255 209 aa9.49□□□□□ -0.89
NUP188-211ENST00000550219 PRM2P04554 102 aa9.49□□□□□ -0.89
NUP188-211ENST00000550219 PFN1P07737 140 aaKnown RBP9.49□□□□□ -0.89
NUP188-211ENST00000550219 TMEM241Q24JQ0 296 aa9.49□□□□□ -0.89
NUP188-211ENST00000550219 Q6ZQT7 251 aa9.49□□□□□ -0.89
NUP188-211ENST00000550219 TMEM256Q8N2U0 113 aa9.49□□□□□ -0.89
NUP188-211ENST00000550219 FAM210BQ96KR6 192 aa9.49□□□□□ -0.89
NUP188-211ENST00000550219 LINC00467Q9BRT7 94 aa9.49□□□□□ -0.89
NUP188-211ENST00000550219 SDF2L1Q9HCN8 221 aa9.49□□□□□ -0.89
NUP188-211ENST00000550219 NAT8Q9UHE5 227 aa9.49□□□□□ -0.89
NUP188-211ENST00000550219 FABP5P3A8MUU1 101 aa9.48□□□□□ -0.89
NUP188-211ENST00000550219 H7BYZ3 331 aa9.48□□□□□ -0.89
NUP188-211ENST00000550219 ADCYAP1P18509 176 aa9.48□□□□□ -0.89
NUP188-211ENST00000550219 C10orf91Q5T1B1 145 aa9.48□□□□□ -0.89
NUP188-211ENST00000550219 FAM162BQ5T6X4 162 aa9.48□□□□□ -0.89
NUP188-211ENST00000550219 LINC01551Q86U37 167 aa9.48□□□□□ -0.89
NUP188-211ENST00000550219 SLC7A5P1Q8MH63 180 aa9.48□□□□□ -0.89
NUP188-211ENST00000550219 BIN3Q9NQY0 253 aa9.48□□□□□ -0.89
NUP188-211ENST00000550219 C19orf71A6NCJ1 209 aa9.47□□□□□ -0.89
NUP188-211ENST00000550219 SH2D1AO60880 128 aa9.47□□□□□ -0.89
NUP188-211ENST00000550219 RPL23P62829 140 aaKnown RBP9.47□□□□□ -0.89
NUP188-211ENST00000550219 LGALS9BQ3B8N2 356 aa9.47□□□□□ -0.89
NUP188-211ENST00000550219 TDRG1Q3Y452 100 aa9.47□□□□□ -0.89
NUP188-211ENST00000550219 PYGO2Q9BRQ0 406 aa9.47□□□□□ -0.89
NUP188-211ENST00000550219 SEC11CQ9BY50 192 aa9.47□□□□□ -0.89
NUP188-211ENST00000550219 C11orf21Q9P2W6 132 aa9.47□□□□□ -0.89
NUP188-211ENST00000550219 DEFB130BP0DP73 79 aa9.46□□□□□ -0.9
NUP188-211ENST00000550219 DEFB130AP0DP74 79 aa9.46□□□□□ -0.9
NUP188-211ENST00000550219 MGST1P10620 155 aaKnown RBP9.46□□□□□ -0.9
NUP188-211ENST00000550219 OR5I1Q13606 314 aa9.46□□□□□ -0.9
NUP188-211ENST00000550219 ZNF575Q86XF7 245 aa9.46□□□□□ -0.9
NUP188-211ENST00000550219 LINC01587Q99440 93 aa9.46□□□□□ -0.9
NUP188-211ENST00000550219 IGHV1OR15-1A0A075B7D0 117 aa9.45□□□□□ -0.9
NUP188-211ENST00000550219 IGKV3D-20A0A0C4DH25 116 aa9.45□□□□□ -0.9
NUP188-211ENST00000550219 F8W036 122 aa9.45□□□□□ -0.9
NUP188-211ENST00000550219 HTN1P15515 57 aa9.45□□□□□ -0.9
NUP188-211ENST00000550219 LINC01559Q495D7 138 aa9.45□□□□□ -0.9
NUP188-211ENST00000550219 FAM231DQ6ZW35 169 aa9.45□□□□□ -0.9
NUP188-211ENST00000550219 ISOC2Q96AB3 205 aa9.45□□□□□ -0.9
NUP188-211ENST00000550219 CARHSP1Q9Y2V2 147 aaKnown RBP9.45□□□□□ -0.9
NUP188-211ENST00000550219 LYRM9A8MSI8 78 aa9.44□□□□□ -0.9
NUP188-211ENST00000550219 KRBOX1C9JBD0 128 aa9.44□□□□□ -0.9
NUP188-211ENST00000550219 PNRC1Q12796 327 aaPredicted RBP9.44□□□□□ -0.9
NUP188-211ENST00000550219 ANXA2RQ3ZCQ2 193 aa9.44□□□□□ -0.9
NUP188-211ENST00000550219 PRR27Q6MZM9 219 aa9.44□□□□□ -0.9
NUP188-211ENST00000550219 FAM159AQ6UWV7 190 aa9.44□□□□□ -0.9
NUP188-211ENST00000550219 C15orf53Q8NAA6 179 aa9.44□□□□□ -0.9
NUP188-211ENST00000550219 FAT2Q9NYQ8 4349 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms