RNA–Protein interactions for RNA: ENST00000549727.1

ATP2B1-206, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-206ENST00000549727 LINC00477Q96M19 166 aa3.61□□□□□ -1.83
ATP2B1-206ENST00000549727 GAFA1Q96PS6 74 aa3.61□□□□□ -1.83
ATP2B1-206ENST00000549727 HSPB9Q9BQS6 159 aa3.61□□□□□ -1.83
ATP2B1-206ENST00000549727 TMEM70Q9BUB7 260 aa3.61□□□□□ -1.83
ATP2B1-206ENST00000549727 SOX21Q9Y651 276 aaPredicted RBP3.61□□□□□ -1.83
ATP2B1-206ENST00000549727 V9GYV3 84 aa3.61□□□□□ -1.83
ATP2B1-206ENST00000549727 LAMA1P25391 3075 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 SMIM27A0A1W2PRY6 76 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 TCRBV4S1A1TA0A5B7 111 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 C20orf202A1L168 122 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 GRIFINA4D1Z8 144 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 NDUFB3O43676 98 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 IGHV1-46P01743 117 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 IGHV3-7P01780 117 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 APCSP02743 223 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 TFF1P04155 84 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 RNASE2P10153 161 aaKnown RBP3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 MGST1P10620 155 aaKnown RBP3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 DEFA4P12838 97 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 CA7P43166 264 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 TCF23Q7RTU1 214 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 ATP5L2Q7Z4Y8 100 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 LINC00311Q8N616 119 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 DEFB108BQ8NET1 73 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 LINC01587Q99440 93 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 CCL13Q99616 98 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 PAXXQ9BUH6 204 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 NDUFA4L2Q9NRX3 87 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 SS18L2Q9UHA2 77 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 LINC00527Q9UJ94 153 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 PKIGQ9Y2B9 76 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 AMMECR1Q9Y4X0 333 aaPredicted RBP3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 AHCTF1Q8WYP5 2266 aa3.6□□□□□ -1.83
ATP2B1-206ENST00000549727 USF3Q68DE3 2245 aa3.59□□□□□ -1.83
ATP2B1-206ENST00000549727 TRAV8-1A0A0A6YYK1 113 aa3.59□□□□□ -1.84
ATP2B1-206ENST00000549727 IGHV3-74A0A0B4J1X5 117 aa3.59□□□□□ -1.84
ATP2B1-206ENST00000549727 FAM236DA0A1B0GTK5 79 aa3.59□□□□□ -1.84
ATP2B1-206ENST00000549727 DPRXA6NFQ7 191 aa3.59□□□□□ -1.84
ATP2B1-206ENST00000549727 SAA1P0DJI8 122 aaPredicted RBP3.59□□□□□ -1.84
ATP2B1-206ENST00000549727 FAM236CP0DP71 79 aa3.59□□□□□ -1.84
ATP2B1-206ENST00000549727 FGF6P10767 208 aa3.59□□□□□ -1.84
ATP2B1-206ENST00000549727 MP68P56378 58 aa3.59□□□□□ -1.84
ATP2B1-206ENST00000549727 COL5A1-AS1Q5SY13 56 aa3.59□□□□□ -1.84
ATP2B1-206ENST00000549727 TMEM136Q6ZRR5 245 aa3.59□□□□□ -1.84
ATP2B1-206ENST00000549727 Q6ZS92 163 aa3.59□□□□□ -1.84
ATP2B1-206ENST00000549727 GTSCR1Q86UQ5 136 aa3.59□□□□□ -1.84
ATP2B1-206ENST00000549727 LY6G5BQ8NDX9 201 aa3.59□□□□□ -1.84
ATP2B1-206ENST00000549727 FAM57AQ8TBR7 257 aa3.59□□□□□ -1.84
ATP2B1-206ENST00000549727 LEAP2Q969E1 77 aa3.59□□□□□ -1.84
ATP2B1-206ENST00000549727 IGF2BP2-AS1Q96M15 143 aa3.59□□□□□ -1.84
ATP2B1-206ENST00000549727 SNHG12Q9BXW3 62 aa3.59□□□□□ -1.84
ATP2B1-206ENST00000549727 UQCR10Q9UDW1 63 aa3.59□□□□□ -1.84
ATP2B1-206ENST00000549727 CACNA1DQ01668 2161 aa3.59□□□□□ -1.84
ATP2B1-206ENST00000549727 MED13Q9UHV7 2174 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 A8MWL6 223 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 GGTLC3B5MD39 225 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 H0YJW9 148 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 NUPR1O60356 82 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 ZNF324O75467 553 aaPredicted RBP3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 IGKV1-16P04430 117 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 SCGB1C2P0DMR2 95 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 GATA2P23769 480 aaPredicted RBP3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 SRIP30626 198 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 ZNF137PP52743 207 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 KRTDAPP60985 99 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 FAM216BQ8N7L0 139 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 ST6GALNAC3Q8NDV1 305 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 DEFB124Q8NES8 71 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 NPBQ8NG41 125 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 TSKUQ8WUA8 353 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 H1FXQ92522 213 aaKnown RBP3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 VSIG2Q96IQ7 327 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 GPR82Q96P67 336 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 TIMM17AQ99595 171 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 TRGV9Q99603 122 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 RNF5Q99942 180 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 ANAPC13Q9BS18 74 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 FAM103A1Q9BTL3 118 aaKnown RBP3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 RNASE7Q9H1E1 156 aaKnown RBP3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 TNFRSF19Q9NS68 423 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 ZNF355PQ9NSJ1 428 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 CBLN4Q9NTU7 201 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 KAAG1Q9UBP8 84 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 EPDR1Q9UM22 224 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 KNTC1P50748 2209 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 TRIOBPQ9H2D6 2365 aa3.58□□□□□ -1.84
ATP2B1-206ENST00000549727 FAM186AA6NE01 2351 aa3.57□□□□□ -1.84
ATP2B1-206ENST00000549727 DOCK11Q5JSL3 2073 aa3.57□□□□□ -1.84
ATP2B1-206ENST00000549727 IGKV1OR2-108A0A075B7D4 117 aa3.57□□□□□ -1.84
ATP2B1-206ENST00000549727 A0A0J9YXY3 114 aa3.57□□□□□ -1.84
ATP2B1-206ENST00000549727 EPM2AB3EWF7 344 aa3.57□□□□□ -1.84
ATP2B1-206ENST00000549727 K7EP13 123 aa3.57□□□□□ -1.84
ATP2B1-206ENST00000549727 SPINK4O60575 86 aa3.57□□□□□ -1.84
ATP2B1-206ENST00000549727 HYPMO75409 117 aa3.57□□□□□ -1.84
ATP2B1-206ENST00000549727 IGLV2-8P01709 118 aa3.57□□□□□ -1.84
ATP2B1-206ENST00000549727 SLC25A5P05141 298 aaKnown RBP3.57□□□□□ -1.84
ATP2B1-206ENST00000549727 ZNF25P17030 456 aaPredicted RBP3.57□□□□□ -1.84
ATP2B1-206ENST00000549727 S100A7P31151 101 aa3.57□□□□□ -1.84
ATP2B1-206ENST00000549727 RPL27AP46776 148 aaKnown RBP3.57□□□□□ -1.84
ATP2B1-206ENST00000549727 CCL8P80075 99 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms