RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 CYB561D1Q8N8Q1 229 aa10.15□□□□□ -0.78
LINC00661-203ENST00000549131 KCNS1Q96KK3 526 aa10.15□□□□□ -0.78
LINC00661-203ENST00000549131 IGHV3-16A0A0C4DH30 117 aa10.14□□□□□ -0.79
LINC00661-203ENST00000549131 SMLR1H3BR10 107 aa10.14□□□□□ -0.79
LINC00661-203ENST00000549131 GNRH2O43555 120 aa10.14□□□□□ -0.79
LINC00661-203ENST00000549131 CRYBA4P53673 196 aa10.14□□□□□ -0.79
LINC00661-203ENST00000549131 UBE2G2P60604 165 aa10.14□□□□□ -0.79
LINC00661-203ENST00000549131 FLI1Q01543 452 aaPredicted RBP10.14□□□□□ -0.79
LINC00661-203ENST00000549131 SLAQ13239 276 aa10.14□□□□□ -0.79
LINC00661-203ENST00000549131 FHL2Q14192 279 aa10.14□□□□□ -0.79
LINC00661-203ENST00000549131 ZNF726P1Q15940 193 aa10.14□□□□□ -0.79
LINC00661-203ENST00000549131 PRNTQ86SH4 94 aa10.14□□□□□ -0.79
LINC00661-203ENST00000549131 RASL10AQ92737 203 aa10.14□□□□□ -0.79
LINC00661-203ENST00000549131 ZNF479Q96JC4 524 aa10.14□□□□□ -0.79
LINC00661-203ENST00000549131 KRTAP1-5Q9BYS1 174 aa10.14□□□□□ -0.79
LINC00661-203ENST00000549131 EPDR1Q9UM22 224 aa10.14□□□□□ -0.79
LINC00661-203ENST00000549131 PSG8Q9UQ74 426 aa10.14□□□□□ -0.79
LINC00661-203ENST00000549131 HHLA3Q9XRX5 114 aa10.14□□□□□ -0.79
LINC00661-203ENST00000549131 TAAR5O14804 337 aa10.13□□□□□ -0.79
LINC00661-203ENST00000549131 GCGP01275 180 aa10.13□□□□□ -0.79
LINC00661-203ENST00000549131 IFNA7P01567 189 aa10.13□□□□□ -0.79
LINC00661-203ENST00000549131 FGF8P55075 233 aaPredicted RBP10.13□□□□□ -0.79
LINC00661-203ENST00000549131 TNP2Q05952 138 aa10.13□□□□□ -0.79
LINC00661-203ENST00000549131 TMEM75Q8N9X5 138 aa10.13□□□□□ -0.79
LINC00661-203ENST00000549131 PCNPQ8WW12 178 aaKnown RBP10.13□□□□□ -0.79
LINC00661-203ENST00000549131 DNAH11Q96DT5 4516 aa10.13□□□□□ -0.79
LINC00661-203ENST00000549131 TRAV4A0A0B4J268 109 aa10.12□□□□□ -0.79
LINC00661-203ENST00000549131 A0A1W2PRE2 83 aa10.12□□□□□ -0.79
LINC00661-203ENST00000549131 M0R2P5 195 aa10.12□□□□□ -0.79
LINC00661-203ENST00000549131 IGLV2-11P01706 119 aa10.12□□□□□ -0.79
LINC00661-203ENST00000549131 ZNF80P51504 273 aaPredicted RBP10.12□□□□□ -0.79
LINC00661-203ENST00000549131 MRPL23Q16540 153 aaKnown RBP10.12□□□□□ -0.79
LINC00661-203ENST00000549131 SMUG1Q53HV7 270 aa10.12□□□□□ -0.79
LINC00661-203ENST00000549131 DYNC1H1Q14204 4646 aaKnown RBP10.12□□□□□ -0.79
LINC00661-203ENST00000549131 MAP1LC3B2A6NCE7 125 aa10.11□□□□□ -0.79
LINC00661-203ENST00000549131 NXPH4O95158 308 aa10.11□□□□□ -0.79
LINC00661-203ENST00000549131 PFN1P07737 140 aaKnown RBP10.11□□□□□ -0.79
LINC00661-203ENST00000549131 SRIP30626 198 aa10.11□□□□□ -0.79
LINC00661-203ENST00000549131 ZNF575Q86XF7 245 aa10.11□□□□□ -0.79
LINC00661-203ENST00000549131 OR4C5Q8NGB2 326 aa10.11□□□□□ -0.79
LINC00661-203ENST00000549131 MAP1LC3BQ9GZQ8 125 aa10.11□□□□□ -0.79
LINC00661-203ENST00000549131 TRAV34A0A0B4J273 112 aa10.1□□□□□ -0.79
LINC00661-203ENST00000549131 A0A1W2PPQ1 181 aa10.1□□□□□ -0.79
LINC00661-203ENST00000549131 FBLL1A6NHQ2 334 aaKnown RBP10.1□□□□□ -0.79
LINC00661-203ENST00000549131 C9JCJ5 164 aa10.1□□□□□ -0.79
LINC00661-203ENST00000549131 SIVA1O15304 175 aa10.1□□□□□ -0.79
LINC00661-203ENST00000549131 GYPEP15421 78 aa10.1□□□□□ -0.79
LINC00661-203ENST00000549131 PPT1P50897 306 aa10.1□□□□□ -0.79
LINC00661-203ENST00000549131 NEGR1Q7Z3B1 354 aa10.1□□□□□ -0.79
LINC00661-203ENST00000549131 CYTL1Q9NRR1 136 aa10.1□□□□□ -0.79
LINC00661-203ENST00000549131 C11orf21Q9P2W6 132 aa10.1□□□□□ -0.79
LINC00661-203ENST00000549131 ARL2-SNX15V9GYD0 113 aa10.1□□□□□ -0.79
LINC00661-203ENST00000549131 FAM74A7A6NL05 159 aa10.09□□□□□ -0.79
LINC00661-203ENST00000549131 K7EQD1 137 aa10.09□□□□□ -0.79
LINC00661-203ENST00000549131 PEX7O00628 323 aa10.09□□□□□ -0.79
LINC00661-203ENST00000549131 ORM1P02763 201 aa10.09□□□□□ -0.79
LINC00661-203ENST00000549131 ZNF345Q14585 488 aa10.09□□□□□ -0.79
LINC00661-203ENST00000549131 SAPCD1Q5SSQ6 148 aa10.09□□□□□ -0.79
LINC00661-203ENST00000549131 Q86TA4 180 aa10.09□□□□□ -0.79
LINC00661-203ENST00000549131 LINC00479Q96M42 142 aa10.09□□□□□ -0.79
LINC00661-203ENST00000549131 MED14OSP0DP75 135 aa10.08□□□□□ -0.8
LINC00661-203ENST00000549131 ZNF876PQ49A33 203 aa10.08□□□□□ -0.8
LINC00661-203ENST00000549131 LINC00315P59091 139 aa10.07□□□□□ -0.8
LINC00661-203ENST00000549131 LYPD5Q6UWN5 251 aa10.07□□□□□ -0.8
LINC00661-203ENST00000549131 KCNRGQ8N5I3 272 aa10.07□□□□□ -0.8
LINC00661-203ENST00000549131 HIST1H2BAQ96A08 127 aa10.07□□□□□ -0.8
LINC00661-203ENST00000549131 TXNDC17Q9BRA2 123 aa10.07□□□□□ -0.8
LINC00661-203ENST00000549131 NKX6-2Q9C056 277 aaPredicted RBP10.07□□□□□ -0.8
LINC00661-203ENST00000549131 FHITP49789 147 aa10.06□□□□□ -0.8
LINC00661-203ENST00000549131 NHLRC2Q8NBF2 726 aa10.06□□□□□ -0.8
LINC00661-203ENST00000549131 STOML3Q8TAV4 291 aa10.06□□□□□ -0.8
LINC00661-203ENST00000549131 C9orf85Q96MD7 179 aa10.06□□□□□ -0.8
LINC00661-203ENST00000549131 ZNF471Q9BX82 626 aaPredicted RBP10.06□□□□□ -0.8
LINC00661-203ENST00000549131 LOC100131303A0A0U1RQF7 123 aa10.05□□□□□ -0.8
LINC00661-203ENST00000549131 KANTRA0A1W2PQU2 76 aa10.05□□□□□ -0.8
LINC00661-203ENST00000549131 C16orf90A8MZG2 172 aa10.05□□□□□ -0.8
LINC00661-203ENST00000549131 BCL2L11O43521 198 aa10.05□□□□□ -0.8
LINC00661-203ENST00000549131 GATA1P15976 413 aaPredicted RBP10.05□□□□□ -0.8
LINC00661-203ENST00000549131 UBE2G1P62253 170 aa10.05□□□□□ -0.8
LINC00661-203ENST00000549131 ZNF506Q5JVG8 444 aa10.05□□□□□ -0.8
LINC00661-203ENST00000549131 CST9LP1Q5W188 147 aa10.05□□□□□ -0.8
LINC00661-203ENST00000549131 OR11H4Q8NGC9 324 aa10.05□□□□□ -0.8
LINC00661-203ENST00000549131 IGHV3-73A0A0B4J1V6 119 aa10.04□□□□□ -0.8
LINC00661-203ENST00000549131 A0A1B0GV50 99 aa10.04□□□□□ -0.8
LINC00661-203ENST00000549131 HMSDA8MTL9 139 aa10.04□□□□□ -0.8
LINC00661-203ENST00000549131 RNASE3P12724 160 aaKnown RBP10.04□□□□□ -0.8
LINC00661-203ENST00000549131 BTF3P20290 206 aaKnown RBP10.04□□□□□ -0.8
LINC00661-203ENST00000549131 S100A4P26447 101 aaKnown RBP10.04□□□□□ -0.8
LINC00661-203ENST00000549131 CFAP126Q5VTH2 177 aa10.04□□□□□ -0.8
LINC00661-203ENST00000549131 DPPA3Q6W0C5 159 aa10.04□□□□□ -0.8
LINC00661-203ENST00000549131 WFDC10BQ8IUB3 73 aa10.04□□□□□ -0.8
LINC00661-203ENST00000549131 FAM213BQ8TBF2 198 aa10.04□□□□□ -0.8
LINC00661-203ENST00000549131 FMC1Q96HJ9 113 aa10.04□□□□□ -0.8
LINC00661-203ENST00000549131 LY96Q9Y6Y9 160 aa10.04□□□□□ -0.8
LINC00661-203ENST00000549131 PCLOQ9Y6V0 5065 aa10.04□□□□□ -0.8
LINC00661-203ENST00000549131 IGKV3D-20A0A0C4DH25 116 aa10.03□□□□□ -0.8
LINC00661-203ENST00000549131 A0A0D9SG52 128 aa10.03□□□□□ -0.8
LINC00661-203ENST00000549131 PGPEP1LA6NFU8 196 aa10.03□□□□□ -0.8
LINC00661-203ENST00000549131 FABP5P3A8MUU1 101 aa10.03□□□□□ -0.8
LINC00661-203ENST00000549131 RS1O15537 224 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms