RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 FGF8P55075 233 aaPredicted RBP10.28□□□□□ -0.76
CCDC38-205ENST00000546947 SLAQ13239 276 aa10.28□□□□□ -0.76
CCDC38-205ENST00000546947 MAP1LC3BQ9GZQ8 125 aa10.28□□□□□ -0.76
CCDC38-205ENST00000546947 SDF2L1Q9HCN8 221 aa10.28□□□□□ -0.76
CCDC38-205ENST00000546947 LINC00588Q9Y4M8 146 aa10.28□□□□□ -0.76
CCDC38-205ENST00000546947 FAM74A7A6NL05 159 aa10.27□□□□□ -0.77
CCDC38-205ENST00000546947 BCL2L11O43521 198 aa10.27□□□□□ -0.77
CCDC38-205ENST00000546947 TYMSP04818 313 aa10.27□□□□□ -0.77
CCDC38-205ENST00000546947 UBE2G2P60604 165 aa10.27□□□□□ -0.77
CCDC38-205ENST00000546947 ZFP69Q49AA0 526 aa10.27□□□□□ -0.77
CCDC38-205ENST00000546947 SMUG1Q53HV7 270 aa10.27□□□□□ -0.77
CCDC38-205ENST00000546947 SAPCD1Q5SSQ6 148 aa10.27□□□□□ -0.77
CCDC38-205ENST00000546947 PRNTQ86SH4 94 aa10.27□□□□□ -0.77
CCDC38-205ENST00000546947 ZNRF2Q8NHG8 242 aa10.27□□□□□ -0.77
CCDC38-205ENST00000546947 STOML3Q8TAV4 291 aa10.27□□□□□ -0.77
CCDC38-205ENST00000546947 RASL10AQ92737 203 aa10.27□□□□□ -0.77
CCDC38-205ENST00000546947 VSIG2Q96IQ7 327 aa10.27□□□□□ -0.77
CCDC38-205ENST00000546947 C8orf49Q96NF6 230 aa10.27□□□□□ -0.77
CCDC38-205ENST00000546947 IGHV3-16A0A0C4DH30 117 aa10.26□□□□□ -0.77
CCDC38-205ENST00000546947 UMAD1C9J7I0 102 aa10.26□□□□□ -0.77
CCDC38-205ENST00000546947 GNRH2O43555 120 aa10.26□□□□□ -0.77
CCDC38-205ENST00000546947 GCGP01275 180 aa10.26□□□□□ -0.77
CCDC38-205ENST00000546947 IFNA7P01567 189 aa10.26□□□□□ -0.77
CCDC38-205ENST00000546947 IGHV3-53P01767 116 aa10.26□□□□□ -0.77
CCDC38-205ENST00000546947 ZNF80P51504 273 aaPredicted RBP10.26□□□□□ -0.77
CCDC38-205ENST00000546947 EIF5AP63241 154 aaKnown RBP10.26□□□□□ -0.77
CCDC38-205ENST00000546947 HIST1H2BAQ96A08 127 aa10.26□□□□□ -0.77
CCDC38-205ENST00000546947 ZNF471Q9BX82 626 aaPredicted RBP10.26□□□□□ -0.77
CCDC38-205ENST00000546947 PRO0255Q9UI72 69 aa10.26□□□□□ -0.77
CCDC38-205ENST00000546947 A0A096LPF7 62 aa10.25□□□□□ -0.77
CCDC38-205ENST00000546947 M0R2P5 195 aa10.25□□□□□ -0.77
CCDC38-205ENST00000546947 PEX7O00628 323 aa10.25□□□□□ -0.77
CCDC38-205ENST00000546947 PAX4O43316 350 aa10.25□□□□□ -0.77
CCDC38-205ENST00000546947 PFN1P07737 140 aaKnown RBP10.25□□□□□ -0.77
CCDC38-205ENST00000546947 PPT1P50897 306 aa10.25□□□□□ -0.77
CCDC38-205ENST00000546947 FHL2Q14192 279 aa10.25□□□□□ -0.77
CCDC38-205ENST00000546947 ARL2-SNX15V9GYD0 113 aa10.25□□□□□ -0.77
CCDC38-205ENST00000546947 RTL8CO15255 209 aa10.24□□□□□ -0.77
CCDC38-205ENST00000546947 FHITP49789 147 aa10.24□□□□□ -0.77
CCDC38-205ENST00000546947 CRYBA4P53673 196 aa10.24□□□□□ -0.77
CCDC38-205ENST00000546947 ESRGQ1W209 222 aa10.24□□□□□ -0.77
CCDC38-205ENST00000546947 SOHLH1Q5JUK2 328 aa10.24□□□□□ -0.77
CCDC38-205ENST00000546947 LINC00479Q96M42 142 aa10.24□□□□□ -0.77
CCDC38-205ENST00000546947 TCEAL7Q9BRU2 100 aa10.24□□□□□ -0.77
CCDC38-205ENST00000546947 UPK3BQ9BT76 320 aa10.24□□□□□ -0.77
CCDC38-205ENST00000546947 HHLA3Q9XRX5 114 aa10.24□□□□□ -0.77
CCDC38-205ENST00000546947 TRAV4A0A0B4J268 109 aa10.23□□□□□ -0.77
CCDC38-205ENST00000546947 TRAV34A0A0B4J273 112 aa10.23□□□□□ -0.77
CCDC38-205ENST00000546947 TRGV4A0A0C4DH28 118 aa10.23□□□□□ -0.77
CCDC38-205ENST00000546947 NBDYA0A0U1RRE5 68 aa10.23□□□□□ -0.77
CCDC38-205ENST00000546947 PFDN1O60925 122 aa10.23□□□□□ -0.77
CCDC38-205ENST00000546947 C4orf48Q5BLP8 95 aa10.23□□□□□ -0.77
CCDC38-205ENST00000546947 C1orf134Q5TEV5 83 aa10.23□□□□□ -0.77
CCDC38-205ENST00000546947 DPPA3Q6W0C5 159 aa10.23□□□□□ -0.77
CCDC38-205ENST00000546947 TMUB2Q71RG4 321 aa10.23□□□□□ -0.77
CCDC38-205ENST00000546947 MBD3L1Q8WWY6 194 aa10.23□□□□□ -0.77
CCDC38-205ENST00000546947 Q9H8V8 135 aa10.23□□□□□ -0.77
CCDC38-205ENST00000546947 C11orf21Q9P2W6 132 aa10.23□□□□□ -0.77
CCDC38-205ENST00000546947 MRPS16Q9Y3D3 137 aaKnown RBP10.23□□□□□ -0.77
CCDC38-205ENST00000546947 ICOSQ9Y6W8 199 aa10.23□□□□□ -0.77
CCDC38-205ENST00000546947 PRSS29PA6NIE9 313 aa10.22□□□□□ -0.77
CCDC38-205ENST00000546947 SFTA3P0C7M3 94 aa10.22□□□□□ -0.77
CCDC38-205ENST00000546947 TPT1P13693 172 aaKnown RBP10.22□□□□□ -0.77
CCDC38-205ENST00000546947 Q86TA4 180 aa10.22□□□□□ -0.77
CCDC38-205ENST00000546947 FAM213BQ8TBF2 198 aa10.22□□□□□ -0.77
CCDC38-205ENST00000546947 ZNF479Q96JC4 524 aa10.22□□□□□ -0.77
CCDC38-205ENST00000546947 FABP5P3A8MUU1 101 aa10.21□□□□□ -0.77
CCDC38-205ENST00000546947 TCTE3Q8IZS6 198 aa10.21□□□□□ -0.77
CCDC38-205ENST00000546947 OR4C5Q8NGB2 326 aa10.21□□□□□ -0.77
CCDC38-205ENST00000546947 SFT2D1Q8WV19 159 aa10.21□□□□□ -0.77
CCDC38-205ENST00000546947 FMC1Q96HJ9 113 aa10.21□□□□□ -0.77
CCDC38-205ENST00000546947 ZFP30Q9Y2G7 519 aa10.21□□□□□ -0.77
CCDC38-205ENST00000546947 TRBV6-1A0A0K0K1D8 114 aa10.2□□□□□ -0.78
CCDC38-205ENST00000546947 UBE2G1P62253 170 aa10.2□□□□□ -0.78
CCDC38-205ENST00000546947 MRPL23Q16540 153 aaKnown RBP10.2□□□□□ -0.78
CCDC38-205ENST00000546947 LGALSLQ3ZCW2 172 aaPredicted RBP10.2□□□□□ -0.78
CCDC38-205ENST00000546947 TTC32Q5I0X7 151 aa10.2□□□□□ -0.78
CCDC38-205ENST00000546947 CST9LP1Q5W188 147 aa10.2□□□□□ -0.78
CCDC38-205ENST00000546947 COX8CQ7Z4L0 72 aa10.2□□□□□ -0.78
CCDC38-205ENST00000546947 PTH2Q96A98 100 aa10.2□□□□□ -0.78
CCDC38-205ENST00000546947 C9orf85Q96MD7 179 aa10.2□□□□□ -0.78
CCDC38-205ENST00000546947 PKD1P98161 4303 aa10.2□□□□□ -0.78
CCDC38-205ENST00000546947 PKHD1P08F94 4074 aa10.19□□□□□ -0.78
CCDC38-205ENST00000546947 A0A1B0GVY2 172 aa10.19□□□□□ -0.78
CCDC38-205ENST00000546947 CIDEAO60543 219 aa10.19□□□□□ -0.78
CCDC38-205ENST00000546947 PAGE4O60829 102 aa10.19□□□□□ -0.78
CCDC38-205ENST00000546947 ORM1P02763 201 aa10.19□□□□□ -0.78
CCDC38-205ENST00000546947 H2AFB1P0C5Y9 115 aa10.19□□□□□ -0.78
CCDC38-205ENST00000546947 Q6ZNX1 250 aa10.19□□□□□ -0.78
CCDC38-205ENST00000546947 C6orf223Q8N319 242 aa10.19□□□□□ -0.78
CCDC38-205ENST00000546947 PCNPQ8WW12 178 aaKnown RBP10.19□□□□□ -0.78
CCDC38-205ENST00000546947 C9JCJ5 164 aa10.18□□□□□ -0.78
CCDC38-205ENST00000546947 RNASE3P12724 160 aaKnown RBP10.18□□□□□ -0.78
CCDC38-205ENST00000546947 AKR1C3P42330 323 aa10.18□□□□□ -0.78
CCDC38-205ENST00000546947 SMCPP49901 116 aaPredicted RBP10.18□□□□□ -0.78
CCDC38-205ENST00000546947 ZNF876PQ49A33 203 aa10.18□□□□□ -0.78
CCDC38-205ENST00000546947 EIF5AL1Q6IS14 154 aaKnown RBP10.18□□□□□ -0.78
CCDC38-205ENST00000546947 NEGR1Q7Z3B1 354 aa10.18□□□□□ -0.78
CCDC38-205ENST00000546947 DYNC1H1Q14204 4646 aaKnown RBP10.18□□□□□ -0.78
CCDC38-205ENST00000546947 IGKV3D-20A0A0C4DH25 116 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms