RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 OR1L8Q8NGR8 309 aa3.34□□□□□ -1.87
NPAS3-204ENST00000546849 OR10X1Q8NGY0 326 aa3.34□□□□□ -1.87
NPAS3-204ENST00000546849 RNASEH2CQ8TDP1 164 aaKnown RBP3.34□□□□□ -1.87
NPAS3-204ENST00000546849 PACRGQ96M98 296 aaPredicted RBP3.34□□□□□ -1.87
NPAS3-204ENST00000546849 OR51B6Q9H340 312 aa3.34□□□□□ -1.87
NPAS3-204ENST00000546849 C11orf1Q9H5F2 150 aa3.34□□□□□ -1.87
NPAS3-204ENST00000546849 TRAPPC1Q9Y5R8 145 aa3.34□□□□□ -1.87
NPAS3-204ENST00000546849 SOX21Q9Y651 276 aaPredicted RBP3.34□□□□□ -1.87
NPAS3-204ENST00000546849 CELSR2Q9HCU4 2923 aa3.34□□□□□ -1.87
NPAS3-204ENST00000546849 SDK2Q58EX2 2172 aa3.34□□□□□ -1.88
NPAS3-204ENST00000546849 MED13Q9UHV7 2174 aa3.34□□□□□ -1.88
NPAS3-204ENST00000546849 BSNQ9UPA5 3926 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 IGHV2OR16-5A0A0B4J2B6 119 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 A0A1W2PRE2 83 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 C20orf202A1L168 122 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 C9JCJ5 164 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 M0R1B8 84 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 GYPAP02724 150 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 OR5G3P0C626 314 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 CECR9P0C854 216 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 HIST1H1EP10412 219 aaKnown RBP3.33□□□□□ -1.88
NPAS3-204ENST00000546849 HIST1H1BP16401 226 aaKnown RBP3.33□□□□□ -1.88
NPAS3-204ENST00000546849 G0S2P27469 103 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 GNG4P50150 75 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 TAS2R60P59551 318 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 RUNX1Q01196 453 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 EDDM3AQ14507 147 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 PLGLAQ15195 96 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 HLA-DRB5Q30154 266 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 MORN2Q502X0 79 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 TOMM20LQ6UXN7 152 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 TMEM144Q7Z5S9 345 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 PDPNQ86YL7 162 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 MIR7-3HGQ8N6C7 128 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 SPANXA2-OT1Q8N9U9 137 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 BORCS7Q96B45 105 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 DYNLRB1Q9NP97 96 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 ZNF586Q9NXT0 402 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 BET1LQ9NYM9 111 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 IDI2-AS1Q9NZ38 188 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 LINC00312Q9Y6C7 94 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 PXMP4Q9Y6I8 212 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 URGCP-MRPS24S4R325 110 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 SHANK1Q9Y566 2161 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 DNAJC13O75165 2243 aa3.33□□□□□ -1.88
NPAS3-204ENST00000546849 TRAV30A0A087WSZ9 112 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 IGKV1-6A0A0C4DH72 117 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 A0A1B0GW15 77 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 K7EM74 188 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 COX7A2P2O60397 106 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 S1PR2O95136 353 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 FSTL3O95633 263 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 IGKV1-5P01602 117 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 TRBV12-3P01733 135 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 RBP4P02753 201 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 TRGC2P03986 189 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 OR10J1P30954 320 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 UBE2G1P62253 170 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 CCL20P78556 96 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 PRCDQ00LT1 54 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 DEFB109BQ30KR1 87 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 SPNS3Q6ZMD2 512 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 SIGLECL1Q8N7X8 197 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 FDCSPQ8NFU4 85 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 OR10D4PQ8NGN7 298 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 OR1P1Q8NH06 330 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 Q8WTZ3 238 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 SFRP2Q96HF1 295 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 ZNF714Q96N38 554 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 OR2V2Q96R30 315 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 FUT9Q9Y231 359 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 WASHC3Q9Y3C0 194 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 OR51B2Q9Y5P1 312 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 PTPRBP23467 1997 aa3.32□□□□□ -1.88
NPAS3-204ENST00000546849 NBASA2RRP1 2371 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 DOCK10Q96BY6 2186 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 IGLV3-9A0A075B6K5 115 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 LINC00587B1AMM8 73 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 ISLRO14498 428 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 PSPHP1O15172 72 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 OR7C2O60412 319 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 HIST1H2BKO60814 126 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 OXTP01178 125 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 HIST1H2BJP06899 126 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 TRGC1P0CF51 173 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 C8orf88P0DMB2 117 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 FABP4P15090 132 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 HIST1H2BOP23527 126 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 GCHFRP30047 84 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 BRS3P32247 399 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 HIST1H2BBP33778 126 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 AKR1C3P42330 323 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 CA7P43166 264 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 HIST1H2BDP58876 126 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 HIST1H2BCP62807 126 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 RPL31P62899 125 aaKnown RBP3.31□□□□□ -1.88
NPAS3-204ENST00000546849 JOSD1Q15040 202 aaPredicted RBP3.31□□□□□ -1.88
NPAS3-204ENST00000546849 GUSBP1Q15486 140 aa3.31□□□□□ -1.88
NPAS3-204ENST00000546849 USF2Q15853 346 aaPredicted RBP3.31□□□□□ -1.88
NPAS3-204ENST00000546849 PMCHL1Q16048 86 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms