RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 C11orf21Q9P2W6 132 aa12.58□□□□□ -0.4
CHERP-204ENST00000546538 M0R2P5 195 aa12.57□□□□□ -0.4
CHERP-204ENST00000546538 SGK494Q96LW2 274 aa12.57□□□□□ -0.4
CHERP-204ENST00000546538 MSRB1Q9NZV6 116 aa12.57□□□□□ -0.4
CHERP-204ENST00000546538 ORM1P02763 201 aa12.56□□□□□ -0.4
CHERP-204ENST00000546538 ZNF80P51504 273 aaPredicted RBP12.56□□□□□ -0.4
CHERP-204ENST00000546538 CDPF1Q6NVV7 123 aa12.56□□□□□ -0.4
CHERP-204ENST00000546538 NFE4Q86UQ8 179 aa12.56□□□□□ -0.4
CHERP-204ENST00000546538 SRRM2Q9UQ35 2752 aaKnown RBP12.55□□□□□ -0.4
CHERP-204ENST00000546538 GATA1P15976 413 aaPredicted RBP12.55□□□□□ -0.4
CHERP-204ENST00000546538 DPPA3Q6W0C5 159 aa12.55□□□□□ -0.4
CHERP-204ENST00000546538 OR4C5Q8NGB2 326 aa12.55□□□□□ -0.4
CHERP-204ENST00000546538 TREM1Q9NP99 234 aa12.55□□□□□ -0.4
CHERP-204ENST00000546538 TRAV21A0A0B4J279 112 aa12.54□□□□□ -0.4
CHERP-204ENST00000546538 C9JCJ5 164 aa12.54□□□□□ -0.4
CHERP-204ENST00000546538 PET100P0DJ07 73 aa12.54□□□□□ -0.4
CHERP-204ENST00000546538 PQLC2Q6ZP29 291 aa12.54□□□□□ -0.4
CHERP-204ENST00000546538 ARL6IP6Q8N6S5 226 aa12.54□□□□□ -0.4
CHERP-204ENST00000546538 CMTM2Q8TAZ6 248 aa12.54□□□□□ -0.4
CHERP-204ENST00000546538 PCNPQ8WW12 178 aaKnown RBP12.54□□□□□ -0.4
CHERP-204ENST00000546538 DMBT1Q9UGM3 2413 aaPredicted RBP12.54□□□□□ -0.4
CHERP-204ENST00000546538 EPM2AB3EWF7 344 aa12.54□□□□□ -0.4
CHERP-204ENST00000546538 ARL14EPLP0DKL9 152 aa12.54□□□□□ -0.4
CHERP-204ENST00000546538 ACOT6Q3I5F7 207 aaPredicted RBP12.54□□□□□ -0.4
CHERP-204ENST00000546538 TRAV9-2A0A087WT02 112 aa12.53□□□□□ -0.4
CHERP-204ENST00000546538 EREGO14944 169 aa12.53□□□□□ -0.4
CHERP-204ENST00000546538 IGLV2-11P01706 119 aa12.53□□□□□ -0.4
CHERP-204ENST00000546538 CRYGDP07320 174 aa12.53□□□□□ -0.4
CHERP-204ENST00000546538 EVI2AP22794 236 aa12.53□□□□□ -0.4
CHERP-204ENST00000546538 TMEM75Q8N9X5 138 aa12.53□□□□□ -0.4
CHERP-204ENST00000546538 OR10G9Q8NGN4 311 aa12.53□□□□□ -0.4
CHERP-204ENST00000546538 OR10G7Q8NGN6 311 aa12.53□□□□□ -0.4
CHERP-204ENST00000546538 TXNDC17Q9BRA2 123 aa12.53□□□□□ -0.4
CHERP-204ENST00000546538 A0A1W2PPV4 95 aa12.52□□□□□ -0.41
CHERP-204ENST00000546538 LRCOL1A6NCL2 159 aa12.52□□□□□ -0.41
CHERP-204ENST00000546538 K7EP13 123 aa12.52□□□□□ -0.41
CHERP-204ENST00000546538 DEFA1P59665 94 aa12.52□□□□□ -0.41
CHERP-204ENST00000546538 DEFA3P59666 94 aa12.52□□□□□ -0.41
CHERP-204ENST00000546538 SLC25A29Q8N8R3 303 aa12.52□□□□□ -0.41
CHERP-204ENST00000546538 SUN5Q8TC36 379 aa12.52□□□□□ -0.41
CHERP-204ENST00000546538 ASB13Q8WXK3 278 aa12.52□□□□□ -0.41
CHERP-204ENST00000546538 SDF2L1Q9HCN8 221 aa12.52□□□□□ -0.41
CHERP-204ENST00000546538 STAG3L2P0CL84 134 aa12.51□□□□□ -0.41
CHERP-204ENST00000546538 STAG3L3P0CL85 134 aa12.51□□□□□ -0.41
CHERP-204ENST00000546538 TIRAPP58753 221 aa12.51□□□□□ -0.41
CHERP-204ENST00000546538 FAM74A1Q5RGS3 127 aa12.51□□□□□ -0.41
CHERP-204ENST00000546538 CFAP126Q5VTH2 177 aa12.51□□□□□ -0.41
CHERP-204ENST00000546538 FLG2Q5D862 2391 aaPredicted RBP12.51□□□□□ -0.41
CHERP-204ENST00000546538 RS1O15537 224 aa12.5□□□□□ -0.41
CHERP-204ENST00000546538 TCRAP04437 139 aa12.5□□□□□ -0.41
CHERP-204ENST00000546538 HAMPP81172 84 aa12.5□□□□□ -0.41
CHERP-204ENST00000546538 OR2G3Q8NGZ4 309 aa12.5□□□□□ -0.41
CHERP-204ENST00000546538 C9orf85Q96MD7 179 aa12.5□□□□□ -0.41
CHERP-204ENST00000546538 ALG5Q9Y673 324 aa12.5□□□□□ -0.41
CHERP-204ENST00000546538 IGHV3-38A0A0C4DH36 116 aa12.49□□□□□ -0.41
CHERP-204ENST00000546538 GGTLC3B5MD39 225 aa12.49□□□□□ -0.41
CHERP-204ENST00000546538 CDC34P49427 236 aaPredicted RBP12.49□□□□□ -0.41
CHERP-204ENST00000546538 ZNF876PQ49A33 203 aa12.49□□□□□ -0.41
CHERP-204ENST00000546538 Q5VSD8 79 aa12.49□□□□□ -0.41
CHERP-204ENST00000546538 NHLRC2Q8NBF2 726 aa12.49□□□□□ -0.41
CHERP-204ENST00000546538 HSD17B11Q8NBQ5 300 aa12.49□□□□□ -0.41
CHERP-204ENST00000546538 RAB24Q969Q5 203 aa12.49□□□□□ -0.41
CHERP-204ENST00000546538 KCNS1Q96KK3 526 aa12.49□□□□□ -0.41
CHERP-204ENST00000546538 IGHV3-73A0A0B4J1V6 119 aa12.48□□□□□ -0.41
CHERP-204ENST00000546538 FBLL1A6NHQ2 334 aaKnown RBP12.48□□□□□ -0.41
CHERP-204ENST00000546538 GCHFRP30047 84 aa12.48□□□□□ -0.41
CHERP-204ENST00000546538 Q5BKY6 102 aa12.48□□□□□ -0.41
CHERP-204ENST00000546538 LINC01556Q5JQF7 62 aa12.48□□□□□ -0.41
CHERP-204ENST00000546538 C5orf17Q8NAS9 161 aa12.48□□□□□ -0.41
CHERP-204ENST00000546538 SH3BGRL3Q9H299 93 aa12.48□□□□□ -0.41
CHERP-204ENST00000546538 PGPEP1LA6NFU8 196 aa12.47□□□□□ -0.41
CHERP-204ENST00000546538 GCGP01275 180 aa12.47□□□□□ -0.41
CHERP-204ENST00000546538 RNASE3P12724 160 aaKnown RBP12.47□□□□□ -0.41
CHERP-204ENST00000546538 ATP6V0CP27449 155 aa12.47□□□□□ -0.41
CHERP-204ENST00000546538 RGS21Q2M5E4 152 aa12.47□□□□□ -0.41
CHERP-204ENST00000546538 Q6ZSN1 163 aa12.47□□□□□ -0.41
CHERP-204ENST00000546538 Q8N3U1 123 aa12.47□□□□□ -0.41
CHERP-204ENST00000546538 PSG8Q9UQ74 426 aa12.47□□□□□ -0.41
CHERP-204ENST00000546538 IBA57-AS1B1ANH7 110 aa12.46□□□□□ -0.41
CHERP-204ENST00000546538 SMR3BP02814 79 aaPredicted RBP12.46□□□□□ -0.41
CHERP-204ENST00000546538 GCSHP23434 173 aa12.46□□□□□ -0.41
CHERP-204ENST00000546538 ZNF506Q5JVG8 444 aa12.46□□□□□ -0.41
CHERP-204ENST00000546538 C10orf126Q8N4M7 172 aa12.46□□□□□ -0.41
CHERP-204ENST00000546538 TRBV6-4A0A1B0GX49 114 aa12.45□□□□□ -0.42
CHERP-204ENST00000546538 PFN1P07737 140 aaKnown RBP12.45□□□□□ -0.42
CHERP-204ENST00000546538 INAFM2P0DMQ5 153 aa12.45□□□□□ -0.42
CHERP-204ENST00000546538 PPT1P50897 306 aa12.45□□□□□ -0.42
CHERP-204ENST00000546538 SH2D6Q7Z4S9 175 aa12.45□□□□□ -0.42
CHERP-204ENST00000546538 AQP10Q96PS8 301 aa12.45□□□□□ -0.42
CHERP-204ENST00000546538 PSMG3Q9BT73 122 aaPredicted RBP12.45□□□□□ -0.42
CHERP-204ENST00000546538 Q9UF83 564 aa12.45□□□□□ -0.42
CHERP-204ENST00000546538 SERTM2A0A1B0GWG4 89 aa12.45□□□□□ -0.42
CHERP-204ENST00000546538 SUMO1P63165 101 aaKnown RBP12.45□□□□□ -0.42
CHERP-204ENST00000546538 LINC00479Q96M42 142 aa12.45□□□□□ -0.42
CHERP-204ENST00000546538 EPDR1Q9UM22 224 aa12.45□□□□□ -0.42
CHERP-204ENST00000546538 IGKV3D-20A0A0C4DH25 116 aa12.44□□□□□ -0.42
CHERP-204ENST00000546538 TAAR5O14804 337 aa12.44□□□□□ -0.42
CHERP-204ENST00000546538 PTTG1O95997 202 aa12.44□□□□□ -0.42
CHERP-204ENST00000546538 LINC00694P0DN24 101 aa12.44□□□□□ -0.42
CHERP-204ENST00000546538 FLI1Q01543 452 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms