RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 ZNF492Q9P255 531 aa7.67□□□□□ -1.18
TRAF1-203ENST00000546084 ZANQ9Y493 2812 aa7.67□□□□□ -1.18
TRAF1-203ENST00000546084 C19orf71A6NCJ1 209 aa7.66□□□□□ -1.18
TRAF1-203ENST00000546084 IGLV1-47P01700 117 aa7.66□□□□□ -1.18
TRAF1-203ENST00000546084 ADORA2A-AS1P86434 159 aa7.66□□□□□ -1.18
TRAF1-203ENST00000546084 RNF183Q96D59 192 aa7.66□□□□□ -1.18
TRAF1-203ENST00000546084 ZNF747Q9BV97 191 aa7.66□□□□□ -1.18
TRAF1-203ENST00000546084 UTP20O75691 2785 aaKnown RBP7.66□□□□□ -1.18
TRAF1-203ENST00000546084 FABP5P3A8MUU1 101 aa7.66□□□□□ -1.18
TRAF1-203ENST00000546084 G3V4G9 280 aa7.66□□□□□ -1.18
TRAF1-203ENST00000546084 COX8AP10176 69 aa7.66□□□□□ -1.18
TRAF1-203ENST00000546084 EGR2P11161 476 aaPredicted RBP7.66□□□□□ -1.18
TRAF1-203ENST00000546084 MRPL23Q16540 153 aaKnown RBP7.66□□□□□ -1.18
TRAF1-203ENST00000546084 ZFAND6Q6FIF0 208 aa7.66□□□□□ -1.18
TRAF1-203ENST00000546084 OR13C6PQ8NH95 151 aa7.66□□□□□ -1.18
TRAF1-203ENST00000546084 GFRA4Q9GZZ7 299 aa7.66□□□□□ -1.18
TRAF1-203ENST00000546084 CELSR1Q9NYQ6 3014 aa7.66□□□□□ -1.18
TRAF1-203ENST00000546084 RAI1Q7Z5J4 1906 aaPredicted RBP7.66□□□□□ -1.18
TRAF1-203ENST00000546084 NPYP01303 97 aa7.66□□□□□ -1.18
TRAF1-203ENST00000546084 MYCNOSP40205 109 aa7.66□□□□□ -1.18
TRAF1-203ENST00000546084 BLCAPP62952 87 aa7.66□□□□□ -1.18
TRAF1-203ENST00000546084 OR10J6PQ8NGY7 276 aa7.66□□□□□ -1.18
TRAF1-203ENST00000546084 MYOZ3Q8TDC0 251 aa7.66□□□□□ -1.18
TRAF1-203ENST00000546084 DUX3Q96PT4 197 aa7.66□□□□□ -1.18
TRAF1-203ENST00000546084 CHD6Q8TD26 2715 aa7.66□□□□□ -1.18
TRAF1-203ENST00000546084 A0A087WWL8 130 aa7.65□□□□□ -1.18
TRAF1-203ENST00000546084 I3L2K1 104 aa7.65□□□□□ -1.18
TRAF1-203ENST00000546084 OVOL3O00110 214 aa7.65□□□□□ -1.18
TRAF1-203ENST00000546084 FOXE3Q13461 319 aa7.65□□□□□ -1.18
TRAF1-203ENST00000546084 PVRIGQ6DKI7 326 aa7.65□□□□□ -1.18
TRAF1-203ENST00000546084 EEF1AKMT3Q96AZ1 226 aa7.65□□□□□ -1.18
TRAF1-203ENST00000546084 A0A1B0GWB2 263 aa7.65□□□□□ -1.18
TRAF1-203ENST00000546084 CRXO43186 299 aaPredicted RBP7.65□□□□□ -1.18
TRAF1-203ENST00000546084 SRSF9Q13242 221 aaKnown RBP eCLIP7.65□□□□□ -1.18
TRAF1-203ENST00000546084 IGKV3D-20A0A0C4DH25 116 aa7.65□□□□□ -1.19
TRAF1-203ENST00000546084 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.65□□□□□ -1.19
TRAF1-203ENST00000546084 EFNA4P52798 201 aa7.65□□□□□ -1.19
TRAF1-203ENST00000546084 KIR3DS1Q14943 382 aa7.65□□□□□ -1.19
TRAF1-203ENST00000546084 IFI27L1Q96BM0 104 aa7.65□□□□□ -1.19
TRAF1-203ENST00000546084 DKK2Q9UBU2 259 aa7.65□□□□□ -1.19
TRAF1-203ENST00000546084 TRAV12-2A0A075B6T6 113 aa7.64□□□□□ -1.19
TRAF1-203ENST00000546084 SEC11AP67812 179 aa7.64□□□□□ -1.19
TRAF1-203ENST00000546084 A0A0G2JLM5 398 aa7.64□□□□□ -1.19
TRAF1-203ENST00000546084 GAGE12JA6NER3 117 aa7.64□□□□□ -1.19
TRAF1-203ENST00000546084 GAGE7O76087 117 aa7.64□□□□□ -1.19
TRAF1-203ENST00000546084 TRBV12-3P01733 135 aa7.64□□□□□ -1.19
TRAF1-203ENST00000546084 GAGE12FP0CL80 117 aa7.64□□□□□ -1.19
TRAF1-203ENST00000546084 GAGE12GP0CL81 117 aa7.64□□□□□ -1.19
TRAF1-203ENST00000546084 GAGE12IP0CL82 117 aa7.64□□□□□ -1.19
TRAF1-203ENST00000546084 HOXB4P17483 251 aaPredicted RBP7.64□□□□□ -1.19
TRAF1-203ENST00000546084 SRSF2Q01130 221 aaKnown RBP7.64□□□□□ -1.19
TRAF1-203ENST00000546084 GAGE4Q13068 117 aa7.64□□□□□ -1.19
TRAF1-203ENST00000546084 LINC01545Q5VT33 79 aa7.64□□□□□ -1.19
TRAF1-203ENST00000546084 NHP2Q9NX24 153 aaKnown RBP7.64□□□□□ -1.19
TRAF1-203ENST00000546084 SIGLEC8Q9NYZ4 499 aa7.64□□□□□ -1.19
TRAF1-203ENST00000546084 GAS8-AS1O95177 125 aa7.64□□□□□ -1.19
TRAF1-203ENST00000546084 IGF1P05019 195 aa7.64□□□□□ -1.19
TRAF1-203ENST00000546084 PAX8Q06710 450 aa7.64□□□□□ -1.19
TRAF1-203ENST00000546084 USP24Q9UPU5 2620 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 TRAV12-3A0A0B4J271 114 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 LOC107984156A0A0G2JMH3 177 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 C19orf84I3L1E1 186 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 NPFFO15130 113 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 MRPL51Q4U2R6 128 aaKnown RBP7.63□□□□□ -1.19
TRAF1-203ENST00000546084 SIGLEC15Q6ZMC9 328 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 ARL17AQ8IVW1 177 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 TMEM158Q8WZ71 300 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 PRR25Q96S07 402 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 FAM110AQ9BQ89 295 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 TRAV41A0A0B4J266 112 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 TEX48A0A1B0GUV7 120 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 FSTL3O95633 263 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 HBDP02042 147 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 ZNF80P51504 273 aaPredicted RBP7.63□□□□□ -1.19
TRAF1-203ENST00000546084 PCP2Q8IVA1 136 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 IGKV3OR2-268A0A0C4DH90 116 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 A0A1W2PPR1 153 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 OR11H12B2RN74 326 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 CD7P09564 240 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 UCNP55089 124 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 OR11H1Q8NG94 326 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 OR11H2Q8NH07 326 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 HIST1H4GQ99525 98 aa7.63□□□□□ -1.19
TRAF1-203ENST00000546084 IGHV7-81A0A0B4J1V7 117 aa7.62□□□□□ -1.19
TRAF1-203ENST00000546084 KNCNA6PVL3 124 aa7.62□□□□□ -1.19
TRAF1-203ENST00000546084 CTSGP08311 255 aa7.62□□□□□ -1.19
TRAF1-203ENST00000546084 IGHV4-38-2P0DP08 117 aa7.62□□□□□ -1.19
TRAF1-203ENST00000546084 RPS20P60866 119 aaKnown RBP7.62□□□□□ -1.19
TRAF1-203ENST00000546084 ZNF56Q15929 161 aa7.62□□□□□ -1.19
TRAF1-203ENST00000546084 LINC00311Q8N616 119 aa7.62□□□□□ -1.19
TRAF1-203ENST00000546084 OR5A1Q8NGJ0 315 aa7.62□□□□□ -1.19
TRAF1-203ENST00000546084 FANCD2OSQ96PS1 177 aa7.62□□□□□ -1.19
TRAF1-203ENST00000546084 LINC00574Q9H8X3 128 aa7.62□□□□□ -1.19
TRAF1-203ENST00000546084 KAAG1Q9UBP8 84 aa7.62□□□□□ -1.19
TRAF1-203ENST00000546084 A0A0U1RRA0 63 aa7.62□□□□□ -1.19
TRAF1-203ENST00000546084 SNCGO76070 127 aa7.62□□□□□ -1.19
TRAF1-203ENST00000546084 C3orf56Q8N813 242 aa7.62□□□□□ -1.19
TRAF1-203ENST00000546084 APOMO95445 188 aa7.62□□□□□ -1.19
TRAF1-203ENST00000546084 SCGB1C2P0DMR2 95 aa7.62□□□□□ -1.19
TRAF1-203ENST00000546084 PSMG4Q5JS54 123 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms