RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 CITED1Q99966 193 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 TSSC4Q9Y5U2 329 aaPredicted RBP5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 CMYA5Q8N3K9 4069 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 IGHV3-66A0A0C4DH42 116 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 A0A1W2PRX2 142 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 FABP5P3A8MUU1 101 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 K7EMT4 169 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 M0R2Z0 102 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 LGALS9O00182 355 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 KRTDAPP60985 99 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 GDF5OSQ5U4N7 250 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 LCN12Q6JVE5 192 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 NIT1Q86X76 327 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 OR11H1Q8NG94 326 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 OR1N2Q8NGR9 330 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 DLX4Q92988 240 aaPredicted RBP5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 ASCL2Q99929 193 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 MIEN1Q9BRT3 115 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 DAZ1Q9NQZ3 744 aaKnown RBP5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 IGHV7-4-1A0A0J9YVY3 117 aa5.28□□□□□ -1.56
HMGCS2-204ENST00000544913 TMEM238C9JI98 176 aa5.28□□□□□ -1.56
HMGCS2-204ENST00000544913 F2Z2F3 143 aa5.28□□□□□ -1.56
HMGCS2-204ENST00000544913 LINC01619G3V211 115 aa5.28□□□□□ -1.56
HMGCS2-204ENST00000544913 M0R3E3 92 aa5.28□□□□□ -1.56
HMGCS2-204ENST00000544913 KHDC1LQ5JSQ8 128 aa5.28□□□□□ -1.56
HMGCS2-204ENST00000544913 RCHY1Q96PM5 261 aa5.28□□□□□ -1.56
HMGCS2-204ENST00000544913 SMPXQ9UHP9 88 aa5.28□□□□□ -1.56
HMGCS2-204ENST00000544913 LENEPQ9Y5L5 61 aa5.28□□□□□ -1.56
HMGCS2-204ENST00000544913 C2orf70A6NJV1 201 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 H0Y8G0 127 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 M0R143 59 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 CCL24O00175 119 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 SOCS3O14543 225 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 CRXO43186 299 aaPredicted RBP5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 C3orf79P0CE67 100 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 NTF3P20783 257 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 CRIP1P50238 77 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 RBX1P62877 108 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 SAMD13Q5VXD3 122 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 SSBP4Q9BWG4 385 aaPredicted RBP5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 HSPB8Q9UJY1 196 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 SELENOKQ9Y6D0 94 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 TRAV8-2A0A0B4J237 113 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 SH2D1AO60880 128 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 PPBPP02775 128 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 CSN3P07498 182 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 ZNF25P17030 456 aaPredicted RBP5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 HIST1H1AQ02539 215 aaPredicted RBP5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 FAM106AQ4KMX7 169 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 RNASEKQ6P5S7 137 aaKnown RBP5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 NDUFA11Q86Y39 141 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 TMEM70Q9BUB7 260 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 RHPN1-AS1Q9BWJ2 59 aa5.27□□□□□ -1.57
HMGCS2-204ENST00000544913 SORL1Q92673 2214 aa5.26□□□□□ -1.57
HMGCS2-204ENST00000544913 DNHD1Q96M86 4753 aa5.26□□□□□ -1.57
HMGCS2-204ENST00000544913 CTRLP40313 264 aa5.26□□□□□ -1.57
HMGCS2-204ENST00000544913 C9orf47Q6ZRZ4 202 aa5.26□□□□□ -1.57
HMGCS2-204ENST00000544913 OR9G4Q8NGQ1 327 aa5.26□□□□□ -1.57
HMGCS2-204ENST00000544913 SPXQ9BT56 116 aa5.26□□□□□ -1.57
HMGCS2-204ENST00000544913 LAMTOR2Q9Y2Q5 125 aa5.26□□□□□ -1.57
HMGCS2-204ENST00000544913 UFC1Q9Y3C8 167 aa5.26□□□□□ -1.57
HMGCS2-204ENST00000544913 LEPROTL1O95214 131 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 ARMS2P0C7Q2 107 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 HLA-DMBP28068 263 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 NSUN5P1Q3KNT7 163 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 LINC01559Q495D7 138 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 TMEM78Q5T7P6 136 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 FAM104BQ5XKR9 115 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 PET117Q6UWS5 81 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 FAM19A2Q8N3H0 131 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 LINC00482Q8N8I6 264 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 FER1L6-AS1Q8NA97 138 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 LINC00477Q96M19 166 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 C8orf49Q96NF6 230 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 CLUHP3Q96NS8 147 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 MAP1LC3CQ9BXW4 147 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 CNFNQ9BYD5 112 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 AP5S1Q9NUS5 200 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 UQCR10Q9UDW1 63 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 U3KQK5 164 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 TRAV9-2A0A087WT02 112 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 IGKV2-40A0A087WW87 121 aaPredicted RBP5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 TRBV7-9A0A0J9YWB2 115 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 IGKV2D-40P01614 121 aaPredicted RBP5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 IGLC6P0CF74 106 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 ZNF138P52744 262 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 IGFL4Q6B9Z1 124 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 LYZL1Q6UWQ5 148 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 ZNF705AQ6ZN79 300 aaPredicted RBP5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 ORMDL3Q8N138 153 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 Q8N976 141 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 PRSS3P2Q8NHM4 247 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 C20orf173Q96LM9 149 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 TMEM191AQ9H0A3 160 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 PAM16Q9Y3D7 125 aa5.25□□□□□ -1.57
HMGCS2-204ENST00000544913 OVOL1O14753 267 aa5.24□□□□□ -1.57
HMGCS2-204ENST00000544913 PRB4P10163 310 aaPredicted RBP5.24□□□□□ -1.57
HMGCS2-204ENST00000544913 SPATA45Q537H7 98 aa5.24□□□□□ -1.57
HMGCS2-204ENST00000544913 PSMG4Q5JS54 123 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms