RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 C14orf178Q8N769 122 aaPredicted RBP4.51□□□□□ -1.69
VPS50-220ENST00000544910 Q8N9W7 124 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 SIRPDQ9H106 197 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 TP53TG3Q9ULZ0 132 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 FGF6P10767 208 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 HLA-DRB4P13762 266 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 GATA3P23771 443 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 TCTEX1D4Q5JR98 221 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 PRSS57Q6UWY2 283 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 DTX2Q86UW9 622 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 ZNF747Q9BV97 191 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 HLA-DRB4X5D2U9 266 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 IGHV3OR16-12A0A075B7B8 117 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 TRAV26-2A0A0B4J265 109 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 CENPVL3A0A0U1RRI6 287 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 SRSF2Q01130 221 aaKnown RBP4.51□□□□□ -1.69
VPS50-220ENST00000544910 GDF5OSQ5U4N7 250 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 GATD1Q8NB37 220 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 SCRT2Q9NQ03 307 aa4.51□□□□□ -1.69
VPS50-220ENST00000544910 IGHV3-64A0A075B6Q5 118 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 OVOL3O00110 214 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 TNFRSF13BO14836 293 aaPredicted RBP4.5□□□□□ -1.69
VPS50-220ENST00000544910 TAX1BP3O14907 124 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 NDUFS7O75251 213 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 NDUFC2O95298 119 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 CRYBA4P53673 196 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 LINC00158P58513 81 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 MBD6Q96DN6 1003 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 F8VRH5 84 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 K7EMI3 77 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 HIGD1BQ9P298 99 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 SAP30O75446 220 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 ANKRD39Q53RE8 183 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 LINC00173Q6ZV60 143 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 MED12LQ86YW9 2145 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 IGLL5B9A064 214 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 LINC00322Q6ZN03 302 aaPredicted RBP4.5□□□□□ -1.69
VPS50-220ENST00000544910 C5orf56Q8N8D9 126 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 ITLN2Q8WWU7 325 aaPredicted RBP4.5□□□□□ -1.69
VPS50-220ENST00000544910 DOCK7Q96N67 2140 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 LINC01587Q99440 93 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 MLST8Q9BVC4 326 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 CENPFP49454 3210 aa4.5□□□□□ -1.69
VPS50-220ENST00000544910 IGHV7-4-1A0A0J9YVY3 117 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 ADARB2-AS1A8MUL3 147 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 FANCD2OSQ96PS1 177 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 UBL5Q9BZL1 73 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 TEN1Q86WV5 123 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 LAMTOR3Q9UHA4 124 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 A0A087WX48 190 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 ANXA2RQ3ZCQ2 193 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 C2orf66Q6UXQ4 117 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 ZNF493Q6ZR52 646 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 LCNL1Q6ZST4 164 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 AGPAT4-IT1Q9H0P7 198 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 SHANK1Q9Y566 2161 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 TRAV26-1A0A087WT03 109 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 IGKV3D-20A0A0C4DH25 116 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 K7ERJ3 54 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 ZNF876PQ49A33 203 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 Q6ZVH6 145 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 CARD19Q96LW7 228 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 PRADC1Q9BSG0 188 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 PCNTO95613 3336 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 MALP21145 153 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 CTRLP40313 264 aa4.49□□□□□ -1.69
VPS50-220ENST00000544910 FREM1Q5H8C1 2179 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 ATOX1O00244 68 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 PAX4O43316 350 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 BUB3O43684 328 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 RBMY1FQ15415 496 aaKnown RBP4.48□□□□□ -1.69
VPS50-220ENST00000544910 C11orf71Q6IPW1 123 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 NTN5Q8WTR8 489 aaPredicted RBP4.48□□□□□ -1.69
VPS50-220ENST00000544910 MRPL35Q9NZE8 188 aaKnown RBP4.48□□□□□ -1.69
VPS50-220ENST00000544910 ATP5G1P05496 136 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 NPC2P61916 151 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 FOXE3Q13461 319 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 C16orf54Q6UWD8 224 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 AMTNQ6UX39 209 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 TRPT1Q86TN4 253 aaKnown RBP4.48□□□□□ -1.69
VPS50-220ENST00000544910 PIP4P2Q8N4L2 257 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 HTTP42858 3142 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 ZNF415Q09FC8 603 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 FOXI1Q12951 378 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 JPT2Q9H910 190 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 A0A087WWL8 130 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 J3QLI3 93 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 CFC1BP0CG36 223 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 CFC1P0CG37 223 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 C20orf78Q9BR46 151 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 DKK2Q9UBU2 259 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 LENEPQ9Y5L5 61 aa4.48□□□□□ -1.69
VPS50-220ENST00000544910 RTTNQ86VV8 2226 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 C2orf70A6NJV1 201 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 PRAC2D3DTV9 90 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 SYNJ2BPP57105 145 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 C9orf47Q6ZRZ4 202 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 STHQ8IWL8 128 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 SPXQ9BT56 116 aa4.47□□□□□ -1.69
VPS50-220ENST00000544910 TP53TG1Q9Y2A0 90 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms