RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 SLC25A5P05141 298 aaKnown RBP8.64□□□□□ -1.03
USP28-212ENST00000544750 GCHFRP30047 84 aa8.64□□□□□ -1.03
USP28-212ENST00000544750 LCE2DQ5TA82 110 aaPredicted RBP8.64□□□□□ -1.03
USP28-212ENST00000544750 Q6ZQT7 251 aa8.64□□□□□ -1.03
USP28-212ENST00000544750 KCNRGQ8N5I3 272 aa8.64□□□□□ -1.03
USP28-212ENST00000544750 OTORQ9NRC9 128 aa8.64□□□□□ -1.03
USP28-212ENST00000544750 MSRB1Q9NZV6 116 aa8.64□□□□□ -1.03
USP28-212ENST00000544750 FAM30AQ9NZY2 134 aa8.64□□□□□ -1.03
USP28-212ENST00000544750 TRGV1A0A0A0MS02 117 aa8.63□□□□□ -1.03
USP28-212ENST00000544750 LRCOL1A6NCL2 159 aa8.63□□□□□ -1.03
USP28-212ENST00000544750 PGPA6NDG6 321 aa8.63□□□□□ -1.03
USP28-212ENST00000544750 HMSDA8MTL9 139 aa8.63□□□□□ -1.03
USP28-212ENST00000544750 ZNF138P52744 262 aa8.63□□□□□ -1.03
USP28-212ENST00000544750 CRYBA4P53673 196 aa8.63□□□□□ -1.03
USP28-212ENST00000544750 ANXA2RQ3ZCQ2 193 aa8.63□□□□□ -1.03
USP28-212ENST00000544750 TMEM78Q5T7P6 136 aa8.63□□□□□ -1.03
USP28-212ENST00000544750 Q6ZNX1 250 aa8.63□□□□□ -1.03
USP28-212ENST00000544750 ZNF680Q8NEM1 530 aa8.63□□□□□ -1.03
USP28-212ENST00000544750 ST6GAL2Q96JF0 529 aa8.63□□□□□ -1.03
USP28-212ENST00000544750 BOLA1Q9Y3E2 137 aa8.63□□□□□ -1.03
USP28-212ENST00000544750 KLF12Q9Y4X4 402 aa8.63□□□□□ -1.03
USP28-212ENST00000544750 LY96Q9Y6Y9 160 aa8.63□□□□□ -1.03
USP28-212ENST00000544750 TRAV9-2A0A087WT02 112 aa8.62□□□□□ -1.03
USP28-212ENST00000544750 TRBV7-9A0A0J9YWB2 115 aa8.62□□□□□ -1.03
USP28-212ENST00000544750 NMBP08949 121 aa8.62□□□□□ -1.03
USP28-212ENST00000544750 CSN1S1P47710 185 aa8.62□□□□□ -1.03
USP28-212ENST00000544750 TCL1AP56279 114 aa8.62□□□□□ -1.03
USP28-212ENST00000544750 GNG5P63218 68 aa8.62□□□□□ -1.03
USP28-212ENST00000544750 WFDC10BQ8IUB3 73 aa8.62□□□□□ -1.03
USP28-212ENST00000544750 HYLS1Q96M11 299 aa8.62□□□□□ -1.03
USP28-212ENST00000544750 ACTR3CQ9C0K3 210 aaPredicted RBP8.62□□□□□ -1.03
USP28-212ENST00000544750 PRO0255Q9UI72 69 aa8.62□□□□□ -1.03
USP28-212ENST00000544750 CTXND1A0A1B0GTU2 59 aa8.61□□□□□ -1.03
USP28-212ENST00000544750 GGTLC3B5MD39 225 aa8.61□□□□□ -1.03
USP28-212ENST00000544750 CXorf1O96002 111 aa8.61□□□□□ -1.03
USP28-212ENST00000544750 RNASE4P34096 147 aaKnown RBP8.61□□□□□ -1.03
USP28-212ENST00000544750 FHL2Q14192 279 aa8.61□□□□□ -1.03
USP28-212ENST00000544750 MRPL23Q16540 153 aaKnown RBP8.61□□□□□ -1.03
USP28-212ENST00000544750 NEGR1Q7Z3B1 354 aa8.61□□□□□ -1.03
USP28-212ENST00000544750 EIF4E3Q8N5X7 224 aaKnown RBP8.61□□□□□ -1.03
USP28-212ENST00000544750 ARL6IP6Q8N6S5 226 aa8.61□□□□□ -1.03
USP28-212ENST00000544750 NTN5Q8WTR8 489 aaPredicted RBP8.61□□□□□ -1.03
USP28-212ENST00000544750 ARPC5LQ9BPX5 153 aa8.61□□□□□ -1.03
USP28-212ENST00000544750 RPH3ALQ9UNE2 315 aa8.61□□□□□ -1.03
USP28-212ENST00000544750 PKHD1L1Q86WI1 4243 aa8.6□□□□□ -1.03
USP28-212ENST00000544750 IGLV5-52A0A0A0MRZ9 124 aa8.6□□□□□ -1.03
USP28-212ENST00000544750 TRAV8-1A0A0A6YYK1 113 aa8.6□□□□□ -1.03
USP28-212ENST00000544750 GPX1P07203 203 aa8.6□□□□□ -1.03
USP28-212ENST00000544750 SLAQ13239 276 aa8.6□□□□□ -1.03
USP28-212ENST00000544750 SERTAD4-AS1Q5TG53 156 aa8.6□□□□□ -1.03
USP28-212ENST00000544750 GOLT1AQ6ZVE7 132 aa8.6□□□□□ -1.03
USP28-212ENST00000544750 TMED6Q8WW62 240 aa8.6□□□□□ -1.03
USP28-212ENST00000544750 TVP23CQ96ET8 276 aa8.6□□□□□ -1.03
USP28-212ENST00000544750 HHLA3Q9XRX5 114 aa8.6□□□□□ -1.03
USP28-212ENST00000544750 A0A0D9SG52 128 aa8.59□□□□□ -1.03
USP28-212ENST00000544750 BCL2L11O43521 198 aa8.59□□□□□ -1.03
USP28-212ENST00000544750 IGHV3-53P01767 116 aa8.59□□□□□ -1.03
USP28-212ENST00000544750 C1QBP02746 253 aa8.59□□□□□ -1.03
USP28-212ENST00000544750 EVI2AP22794 236 aa8.59□□□□□ -1.03
USP28-212ENST00000544750 FGF8P55075 233 aaPredicted RBP8.59□□□□□ -1.03
USP28-212ENST00000544750 FAM74A1Q5RGS3 127 aa8.59□□□□□ -1.03
USP28-212ENST00000544750 AKR1C8PQ5T2L2 129 aa8.59□□□□□ -1.03
USP28-212ENST00000544750 IBA57Q5T440 356 aaKnown RBP8.59□□□□□ -1.03
USP28-212ENST00000544750 TCTE3Q8IZS6 198 aa8.59□□□□□ -1.03
USP28-212ENST00000544750 CMTM2Q8TAZ6 248 aa8.59□□□□□ -1.03
USP28-212ENST00000544750 C8orf49Q96NF6 230 aa8.59□□□□□ -1.03
USP28-212ENST00000544750 TMEM167BQ9NRX6 74 aa8.59□□□□□ -1.03
USP28-212ENST00000544750 TP53TG3Q9ULZ0 132 aa8.59□□□□□ -1.03
USP28-212ENST00000544750 LENEPQ9Y5L5 61 aa8.59□□□□□ -1.03
USP28-212ENST00000544750 K7EQD1 137 aa8.58□□□□□ -1.04
USP28-212ENST00000544750 TCRAP04437 139 aa8.58□□□□□ -1.04
USP28-212ENST00000544750 FHITP49789 147 aa8.58□□□□□ -1.04
USP28-212ENST00000544750 Q6AWC8 147 aa8.58□□□□□ -1.04
USP28-212ENST00000544750 Q6ZSA8 131 aa8.58□□□□□ -1.04
USP28-212ENST00000544750 TMUB2Q71RG4 321 aa8.58□□□□□ -1.04
USP28-212ENST00000544750 C5orf17Q8NAS9 161 aa8.58□□□□□ -1.04
USP28-212ENST00000544750 MRPL16Q9NX20 251 aaKnown RBP8.58□□□□□ -1.04
USP28-212ENST00000544750 A0A1W2PRE2 83 aa8.57□□□□□ -1.04
USP28-212ENST00000544750 MAP1LC3B2A6NCE7 125 aa8.57□□□□□ -1.04
USP28-212ENST00000544750 IGLV2-11P01706 119 aa8.57□□□□□ -1.04
USP28-212ENST00000544750 PLA2G1BP04054 148 aaKnown RBP8.57□□□□□ -1.04
USP28-212ENST00000544750 CRYGDP07320 174 aa8.57□□□□□ -1.04
USP28-212ENST00000544750 SEC11BP0C7V7 166 aa8.57□□□□□ -1.04
USP28-212ENST00000544750 SUMO1P63165 101 aaKnown RBP8.57□□□□□ -1.04
USP28-212ENST00000544750 Q8N814 137 aa8.57□□□□□ -1.04
USP28-212ENST00000544750 DEFB104AQ8WTQ1 72 aa8.57□□□□□ -1.04
USP28-212ENST00000544750 SGK494Q96LW2 274 aa8.57□□□□□ -1.04
USP28-212ENST00000544750 ZNF471Q9BX82 626 aaPredicted RBP8.57□□□□□ -1.04
USP28-212ENST00000544750 MAP1LC3BQ9GZQ8 125 aa8.57□□□□□ -1.04
USP28-212ENST00000544750 IGHV1OR15-1A0A075B7D0 117 aa8.56□□□□□ -1.04
USP28-212ENST00000544750 SERTM2A0A1B0GWG4 89 aa8.56□□□□□ -1.04
USP28-212ENST00000544750 KANTRA0A1W2PQU2 76 aa8.56□□□□□ -1.04
USP28-212ENST00000544750 FAM74A7A6NL05 159 aa8.56□□□□□ -1.04
USP28-212ENST00000544750 F6UZH7 168 aa8.56□□□□□ -1.04
USP28-212ENST00000544750 RGS13O14921 159 aa8.56□□□□□ -1.04
USP28-212ENST00000544750 LGALSLQ3ZCW2 172 aaPredicted RBP8.56□□□□□ -1.04
USP28-212ENST00000544750 IQCF2Q8IXL9 164 aa8.56□□□□□ -1.04
USP28-212ENST00000544750 C10orf126Q8N4M7 172 aa8.56□□□□□ -1.04
USP28-212ENST00000544750 EPDR1Q9UM22 224 aa8.56□□□□□ -1.04
USP28-212ENST00000544750 SRIP30626 198 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms