RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	OR5H6	Q8NGV6	325 aa		4.09	□□□□□ -1.75
CPSF7-222	ENST00000544585	OR10J6P	Q8NGY7	276 aa		4.09	□□□□□ -1.75
CPSF7-222	ENST00000544585	C15orf40	Q8WUR7	153 aa		4.09	□□□□□ -1.75
CPSF7-222	ENST00000544585	MED28	Q9H204	178 aa		4.09	□□□□□ -1.75
CPSF7-222	ENST00000544585	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	4.09	□□□□□ -1.75
CPSF7-222	ENST00000544585	ZNF586	Q9NXT0	402 aa		4.09	□□□□□ -1.75
CPSF7-222	ENST00000544585	DOK5	Q9P104	306 aa		4.09	□□□□□ -1.75
CPSF7-222	ENST00000544585		Q9UF83	564 aa		4.09	□□□□□ -1.75
CPSF7-222	ENST00000544585	SHPK	Q9UHJ6	478 aa		4.09	□□□□□ -1.75
CPSF7-222	ENST00000544585	MRPS16	Q9Y3D3	137 aa	Known RBP	4.09	□□□□□ -1.75
CPSF7-222	ENST00000544585	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.09	□□□□□ -1.75
CPSF7-222	ENST00000544585	NAP1L6	A6NFF2	107 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	SNRPGP15	A8MWD9	76 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	IGKV1-5	P01602	117 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	FABP1	P07148	127 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585		P0C879	139 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	S100A7	P31151	101 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	BTC	P35070	178 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	LINC00315	P59091	139 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	TAS2R60	P59551	318 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	AP3S2	P59780	193 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	POLR2G	P62487	172 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	SUPT4H1	P63272	117 aa	Known RBP	4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	MRPS10	P82664	201 aa	Known RBP	4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	UBE2NL	Q5JXB2	153 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	AMTN	Q6UX39	209 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	OR8I2	Q8N0Y5	310 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	TOMM5	Q8N4H5	51 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	DEDD2	Q8WXF8	326 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	C16orf74	Q96GX8	76 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	LINC01587	Q99440	93 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	KRTAP1-5	Q9BYS1	174 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	FXYD6	Q9H0Q3	95 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	MCUB	Q9NWR8	336 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585	ANAPC10	Q9UM13	185 aa		4.08	□□□□□ -1.76
CPSF7-222	ENST00000544585		A0A0J9YXY3	114 aa		4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585	C3orf85	A0A1B0GTC6	90 aa		4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585	PLAC8L1	A1L4L8	177 aa		4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585	CRX	O43186	299 aa	Predicted RBP	4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585	CFD	P00746	253 aa	Predicted RBP	4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585	INS	P01308	110 aa		4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585	TCRB	P04435	133 aa		4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585	PRM2	P04554	102 aa		4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585	AZU1	P20160	251 aa		4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585	HRH1	P35367	487 aa		4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585	GALR1	P47211	349 aa		4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585	KRTAP10-1	P60331	282 aa		4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585		Q5BKY6	102 aa		4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585	TMEM69	Q5SWH9	247 aa		4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585		Q6ZRN7	208 aa	Predicted RBP	4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585	TMEM144	Q7Z5S9	345 aa		4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585	SMIM4	Q8WVI0	70 aa		4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585	PBDC1	Q9BVG4	233 aa		4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585	HSPB11	Q9Y547	144 aa		4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585		U3KQ87	197 aa		4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585	FAT1	Q14517	4588 aa		4.07	□□□□□ -1.76
CPSF7-222	ENST00000544585		A0A087WTM6	91 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585		A0A0J9YY99	117 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	ZFP92	A6NM28	416 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	GABARAP	H6UMI1	98 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585		K7EP13	123 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	SULT1A3	P0DMM9	295 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	SULT1A4	P0DMN0	295 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	HTN1	P15515	57 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	GPX4	P36969	197 aa	Predicted RBP	4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	PIGP	P57054	158 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	KIAA0087	Q14695	138 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	SPINK13	Q1W4C9	94 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	C9orf62	Q8N4C0	152 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	C14orf178	Q8N769	122 aa	Predicted RBP	4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	OR11H7	Q8NGC8	314 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	RNASE11	Q8TAA1	199 aa	Known RBP	4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	LRRC20	Q8TCA0	184 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	ZNF431	Q8TF32	576 aa	Predicted RBP	4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	DEFB104A	Q8WTQ1	72 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	C7orf33	Q8WU49	177 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	ISOC2	Q96AB3	205 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	GPR146	Q96CH1	333 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	ACY3	Q96HD9	319 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	GPR82	Q96P67	336 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	NOP10	Q9NPE3	64 aa	Known RBP	4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	SCP2D1	Q9UJQ7	156 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	RCL1	Q9Y2P8	373 aa	Known RBP	4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	MUC2	Q02817	5179 aa		4.06	□□□□□ -1.76
CPSF7-222	ENST00000544585	LINC00862	A6NCI5	91 aa		4.05	□□□□□ -1.76
CPSF7-222	ENST00000544585	ZNF98	A6NK75	572 aa		4.05	□□□□□ -1.76
CPSF7-222	ENST00000544585	CEBPZOS	A8MTT3	80 aa		4.05	□□□□□ -1.76
CPSF7-222	ENST00000544585	SMKR1	H3BMG3	65 aa		4.05	□□□□□ -1.76
CPSF7-222	ENST00000544585		H7BYZ3	331 aa		4.05	□□□□□ -1.76
CPSF7-222	ENST00000544585		M0R2Z0	102 aa		4.05	□□□□□ -1.76
CPSF7-222	ENST00000544585	SSNA1	O43805	119 aa		4.05	□□□□□ -1.76
CPSF7-222	ENST00000544585	CDS2	O95674	445 aa		4.05	□□□□□ -1.76
CPSF7-222	ENST00000544585	IFNA7	P01567	189 aa		4.05	□□□□□ -1.76
CPSF7-222	ENST00000544585	IL5	P05113	134 aa		4.05	□□□□□ -1.76
CPSF7-222	ENST00000544585	FAU	P35544	74 aa	Known RBP	4.05	□□□□□ -1.76
CPSF7-222	ENST00000544585	RHOB	P62745	196 aa		4.05	□□□□□ -1.76
CPSF7-222	ENST00000544585	S100A12	P80511	92 aa		4.05	□□□□□ -1.76
CPSF7-222	ENST00000544585	ARRDC1	Q8N5I2	433 aa		4.05	□□□□□ -1.76
CPSF7-222	ENST00000544585	LINC00612	Q8N6U2	182 aa		4.05	□□□□□ -1.76
CPSF7-222	ENST00000544585	TMEM263	Q8WUH6	116 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms