RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 IGLV2-11P01706 119 aa16.15■□□□□ 0.18
CHFR-222ENST00000544093 SMUG1Q53HV7 270 aa16.15■□□□□ 0.18
CHFR-222ENST00000544093 C1orf134Q5TEV5 83 aa16.15■□□□□ 0.18
CHFR-222ENST00000544093 UPK3BQ9BT76 320 aa16.15■□□□□ 0.18
CHFR-222ENST00000544093 MAP1LC3BQ9GZQ8 125 aa16.15■□□□□ 0.18
CHFR-222ENST00000544093 HECTD4Q9Y4D8 3996 aa16.14■□□□□ 0.17
CHFR-222ENST00000544093 IGHV3-16A0A0C4DH30 117 aa16.14■□□□□ 0.17
CHFR-222ENST00000544093 KANTRA0A1W2PQU2 76 aa16.14■□□□□ 0.17
CHFR-222ENST00000544093 PRSS29PA6NIE9 313 aa16.14■□□□□ 0.17
CHFR-222ENST00000544093 M0R2P5 195 aa16.14■□□□□ 0.17
CHFR-222ENST00000544093 PFN1P07737 140 aaKnown RBP16.14■□□□□ 0.17
CHFR-222ENST00000544093 SEC11BP0C7V7 166 aa16.14■□□□□ 0.17
CHFR-222ENST00000544093 EIF5AP63241 154 aaKnown RBP16.14■□□□□ 0.17
CHFR-222ENST00000544093 PRNTQ86SH4 94 aa16.14■□□□□ 0.17
CHFR-222ENST00000544093 HIST1H2BAQ96A08 127 aa16.14■□□□□ 0.17
CHFR-222ENST00000544093 TCEAL7Q9BRU2 100 aa16.14■□□□□ 0.17
CHFR-222ENST00000544093 HHLA3Q9XRX5 114 aa16.14■□□□□ 0.17
CHFR-222ENST00000544093 ICOSQ9Y6W8 199 aa16.14■□□□□ 0.17
CHFR-222ENST00000544093 A0A096LPF7 62 aa16.13■□□□□ 0.17
CHFR-222ENST00000544093 UMAD1C9J7I0 102 aa16.13■□□□□ 0.17
CHFR-222ENST00000544093 GCGP01275 180 aa16.13■□□□□ 0.17
CHFR-222ENST00000544093 IGHV3-53P01767 116 aa16.13■□□□□ 0.17
CHFR-222ENST00000544093 TYMSP04818 313 aa16.13■□□□□ 0.17
CHFR-222ENST00000544093 FGF8P55075 233 aaPredicted RBP16.13■□□□□ 0.17
CHFR-222ENST00000544093 DNAH2Q9P225 4427 aa16.12■□□□□ 0.17
CHFR-222ENST00000544093 TRGV4A0A0C4DH28 118 aa16.12■□□□□ 0.17
CHFR-222ENST00000544093 FAM74A7A6NL05 159 aa16.12■□□□□ 0.17
CHFR-222ENST00000544093 BCL2L11O43521 198 aa16.12■□□□□ 0.17
CHFR-222ENST00000544093 GNRH2O43555 120 aa16.12■□□□□ 0.17
CHFR-222ENST00000544093 CRYBA4P53673 196 aa16.12■□□□□ 0.17
CHFR-222ENST00000544093 UBE2G2P60604 165 aa16.12■□□□□ 0.17
CHFR-222ENST00000544093 ESRGQ1W209 222 aa16.12■□□□□ 0.17
CHFR-222ENST00000544093 OR11H4Q8NGC9 324 aa16.12■□□□□ 0.17
CHFR-222ENST00000544093 C8orf49Q96NF6 230 aa16.12■□□□□ 0.17
CHFR-222ENST00000544093 Q9H8V8 135 aa16.12■□□□□ 0.17
CHFR-222ENST00000544093 MRPS16Q9Y3D3 137 aaKnown RBP16.12■□□□□ 0.17
CHFR-222ENST00000544093 ARL2-SNX15V9GYD0 113 aa16.12■□□□□ 0.17
CHFR-222ENST00000544093 PEX7O00628 323 aa16.11■□□□□ 0.17
CHFR-222ENST00000544093 FHL2Q14192 279 aa16.11■□□□□ 0.17
CHFR-222ENST00000544093 TTC32Q5I0X7 151 aa16.11■□□□□ 0.17
CHFR-222ENST00000544093 TRAV4A0A0B4J268 109 aa16.1■□□□□ 0.17
CHFR-222ENST00000544093 FHITP49789 147 aa16.1■□□□□ 0.17
CHFR-222ENST00000544093 DPPA3Q6W0C5 159 aa16.1■□□□□ 0.17
CHFR-222ENST00000544093 ZNF471Q9BX82 626 aaPredicted RBP16.1■□□□□ 0.17
CHFR-222ENST00000544093 ZNF80P51504 273 aaPredicted RBP16.09■□□□□ 0.17
CHFR-222ENST00000544093 MRPL23Q16540 153 aaKnown RBP16.09■□□□□ 0.17
CHFR-222ENST00000544093 A0A1W2PPQ1 181 aa16.08■□□□□ 0.16
CHFR-222ENST00000544093 PFDN1O60925 122 aa16.08■□□□□ 0.16
CHFR-222ENST00000544093 OR4C5Q8NGB2 326 aa16.08■□□□□ 0.16
CHFR-222ENST00000544093 CIDEAO60543 219 aa16.07■□□□□ 0.16
CHFR-222ENST00000544093 ORM1P02763 201 aa16.07■□□□□ 0.16
CHFR-222ENST00000544093 C6orf223Q8N319 242 aa16.07■□□□□ 0.16
CHFR-222ENST00000544093 PCNPQ8WW12 178 aaKnown RBP16.07■□□□□ 0.16
CHFR-222ENST00000544093 ZNF479Q96JC4 524 aa16.07■□□□□ 0.16
CHFR-222ENST00000544093 LINC00479Q96M42 142 aa16.07■□□□□ 0.16
CHFR-222ENST00000544093 FAT2Q9NYQ8 4349 aa16.07■□□□□ 0.16
CHFR-222ENST00000544093 A0A1B0GVY2 172 aa16.06■□□□□ 0.16
CHFR-222ENST00000544093 SFTA3P0C7M3 94 aa16.06■□□□□ 0.16
CHFR-222ENST00000544093 BTF3P20290 206 aaKnown RBP16.06■□□□□ 0.16
CHFR-222ENST00000544093 Q86TA4 180 aa16.06■□□□□ 0.16
CHFR-222ENST00000544093 MBD3L1Q8WWY6 194 aa16.06■□□□□ 0.16
CHFR-222ENST00000544093 FMC1Q96HJ9 113 aa16.06■□□□□ 0.16
CHFR-222ENST00000544093 ZFP30Q9Y2G7 519 aa16.06■□□□□ 0.16
CHFR-222ENST00000544093 TRAV34A0A0B4J273 112 aa16.05■□□□□ 0.16
CHFR-222ENST00000544093 FABP5P3A8MUU1 101 aa16.05■□□□□ 0.16
CHFR-222ENST00000544093 TPT1P13693 172 aaKnown RBP16.05■□□□□ 0.16
CHFR-222ENST00000544093 CST9LP1Q5W188 147 aa16.05■□□□□ 0.16
CHFR-222ENST00000544093 NEGR1Q7Z3B1 354 aa16.05■□□□□ 0.16
CHFR-222ENST00000544093 FAM213BQ8TBF2 198 aa16.05■□□□□ 0.16
CHFR-222ENST00000544093 SFT2D1Q8WV19 159 aa16.05■□□□□ 0.16
CHFR-222ENST00000544093 PTH2Q96A98 100 aa16.05■□□□□ 0.16
CHFR-222ENST00000544093 C11orf21Q9P2W6 132 aa16.05■□□□□ 0.16
CHFR-222ENST00000544093 DNAH17Q9UFH2 4485 aa16.05■□□□□ 0.16
CHFR-222ENST00000544093 C9JCJ5 164 aa16.04■□□□□ 0.16
CHFR-222ENST00000544093 SRIP30626 198 aa16.04■□□□□ 0.16
CHFR-222ENST00000544093 UBE2G1P62253 170 aa16.04■□□□□ 0.16
CHFR-222ENST00000544093 LGALSLQ3ZCW2 172 aaPredicted RBP16.04■□□□□ 0.16
CHFR-222ENST00000544093 ZNF876PQ49A33 203 aa16.04■□□□□ 0.16
CHFR-222ENST00000544093 TMUB2Q71RG4 321 aa16.04■□□□□ 0.16
CHFR-222ENST00000544093 COX8CQ7Z4L0 72 aa16.03■□□□□ 0.16
CHFR-222ENST00000544093 C9orf85Q96MD7 179 aa16.03■□□□□ 0.16
CHFR-222ENST00000544093 TRBV6-1A0A0K0K1D8 114 aa16.02■□□□□ 0.16
CHFR-222ENST00000544093 EIF5AL1Q6IS14 154 aaKnown RBP16.02■□□□□ 0.16
CHFR-222ENST00000544093 SH2D6Q7Z4S9 175 aa16.02■□□□□ 0.16
CHFR-222ENST00000544093 TXNDC17Q9BRA2 123 aa16.02■□□□□ 0.16
CHFR-222ENST00000544093 K7EQD1 137 aa16.01■□□□□ 0.15
CHFR-222ENST00000544093 PIK3CD-AS1Q5SR53 167 aa16.01■□□□□ 0.15
CHFR-222ENST00000544093 TCTE3Q8IZS6 198 aa16.01■□□□□ 0.15
CHFR-222ENST00000544093 SIVA1O15304 175 aa16■□□□□ 0.15
CHFR-222ENST00000544093 PAGE4O60829 102 aa16■□□□□ 0.15
CHFR-222ENST00000544093 S100A9P06702 114 aaKnown RBP16■□□□□ 0.15
CHFR-222ENST00000544093 H2AFB1P0C5Y9 115 aa16■□□□□ 0.15
CHFR-222ENST00000544093 GYPEP15421 78 aa16■□□□□ 0.15
CHFR-222ENST00000544093 S100A4P26447 101 aaKnown RBP16■□□□□ 0.15
CHFR-222ENST00000544093 LYPD5Q6UWN5 251 aa16■□□□□ 0.15
CHFR-222ENST00000544093 ASIPP42127 132 aa15.99■□□□□ 0.15
CHFR-222ENST00000544093 AKR1C3P42330 323 aa15.99■□□□□ 0.15
CHFR-222ENST00000544093 RAB5CP51148 216 aa15.99■□□□□ 0.15
CHFR-222ENST00000544093 FAM162BQ5T6X4 162 aa15.99■□□□□ 0.15
CHFR-222ENST00000544093 IGKV3D-20A0A0C4DH25 116 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms